Arvicola amphibius (Eurasian water vole): 119821353
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Entry
119821353 CDS
T08327
Symbol
Dhx34
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119821353 (Dhx34)
Enzymes [BR:
aamp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
119821353 (Dhx34)
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
119821353 (Dhx34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_DHX34
Helicase_C
OB_NTP_bind
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
ResIII
AAA_16
ATPase_2
TsaE
ABC_tran
Motif
Other DBs
NCBI-GeneID:
119821353
NCBI-ProteinID:
XP_038196258
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All DBs
Position
8:complement(70717633..70741103)
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AA seq
1143 aa
AA seq
DB search
MPPPRTRDERDHRDRHHHRAPREEALEKWDWNCPETRRLLEDIFFCDEDYIRRGSEECQK
FWSFFERLQRFQHLKASRKEEKDPGRPTHGIPALADLPHTYDPRYRINLSILGPDTRRCQ
GSGRLLPSERVSEFRRALLHYLDFVQKQAFGRLAKLQRERAALPIAQYGNRILQTLKENQ
VVVVAGDTGCGKSTQVPQYLLAAGFSHVACTQPRRIACISLAKRVGFESLSQYGSQVGYQ
IRFESTRSAATKIVFLTVGLLLRQIQREPTLPQYQVLIVDEVHERHLHNDFLLGVLRGLL
PRRRDLKVILMSATINISLFSSYFSHAPVVQVPGRLFPITVVYQPQEAEQTASKSEKLDP
RPFLRVLEAIDNKYPPEERGDLLVFLSGMAEISTVLDAAQAYASLTQRWVVLPLHSALSV
ADQDKVFDVAPAGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFW
ISQASAEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGD
PRTFPFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMF
SLAEPVLTIAAALSVQSPFTRSAQSSLDCATARRPLESDQGDPFTLFNVFNAWVQVKSER
SGNSRKWCRRRGVEEHRLYEMANLRRQFKELLEDHGLLSGAKIVAPGDSYSRLQQRRERR
ALHQLKRQHEEGGGRRRKVLRLQEDGCSSDEDNEGSASQRPDSVDIQDVKFKLRHNLEQL
QAAASSAQDLTRDQLALLKLVLGRGLYPQLAVPDAFNSGRKDSDQIFHTQAKQGTVLHPT
CVFANSPEVLHTQGQETSGREGSEDGKDQMNCKHQLLAFVSLLETNKPYLVNCVRIPALQ
SLLLFSRSVDTNGDCTRLVADGWLELQLTDSESAVRLLATSLRLRAHWESALDRQLAHQA
QRQRLEQEDEVESPAVSPKEVAALSRELLQFMATKVPYSLRRLTGLEAQNLYVGPQTITA
APNLPGLFGNSTLSPHPTKGGYAVSDFLTYNCLTSDTDLYSDCLRSFWTCPHCGLHMPFT
PLERMAHENTCPEAPKDDPGSEEAAPAPPQKTSALQRPYHCQVCGEDFLFTPTEVLRHRR
QHV
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcccaggacaagggacgagagggatcaccgggaccgacaccaccatcgagct
cccagggaagaagccctggagaaatgggactggaactgtcccgagactcgccgcctcttg
gaagacatattcttctgtgatgaggattacatccgtcgtggttctgaggaatgccagaag
ttctggtctttctttgaacggctgcagagattccagcacctcaaggcctccaggaaggag
gagaaggaccctggccgtcccacacatggcatccctgctctagctgatctacctcacact
tatgacccacgctaccgcatcaacctctccatccttggcccagacactcggcgttgtcag
gggtcgggcaggttgctgccctccgagagagtatctgagttccgtcgggcactgcttcac
tacctggacttcgtgcagaagcaggcttttgggcggcttgccaaactgcagcgtgagcgg
gcagctcttcccattgcccaatatgggaaccgcatcctgcagacactcaaggaaaaccag
gtggtggtggtggccggtgacacgggctgtggcaaatctactcaggtcccccagtactta
ctagctgctggcttcagccatgtggcatgcactcagcctcggagaattgcctgcatctca
ctggccaagcgggttggcttcgagagcctcagtcagtatggctcccaggttggctaccag
atccgctttgaaagcacacgctcggcagccaccaagatcgtgttcctgacggtggggctg
ctcctacgccagatccagcgggagcccaccctgccccagtaccaggtcctgatcgtggac
gaggtccatgagcggcacctgcacaatgacttcttgctgggtgtcctgcgtggcctgctg
cccaggcggcgggacctcaaggtcattctcatgtcggccaccatcaacatctctctcttc
tccagctacttcagccatgctccggtggtgcaggtgcctgggagactcttccccatcacg
gtagtgtaccagccgcaggaggcagagcagacagcatccaagtcagagaagctggaccca
cggcctttcttgagagtgctggaggccatcgacaataagtatccccctgaggagaggggg
gacctccttgttttcctcagcggcatggcagagatcagcacagtgctggatgctgcccag
gcctatgccagcctcacccagcgctgggtggtgctgcctctgcacagtgctctctctgtg
gccgaccaggacaaggtgtttgacgtggctccagctggagtacggaagtgcatcctgtct
accaacattgctgagacctcggtcaccatcgacgggatccgctttgtggtggattctgga
aaggtgaaggagatgagctacgaccctcaggccaaactgcagcggctgcaggaattctgg
atcagccaggccagcgctgagcagcgcaagggccgagcgggccgcacaggcccaggtgtc
tgctaccgcctctatgccgagtctgactacgatgcctttgctccatacccagtcccggaa
attcgcagggtggctctggatgcactggtgcttcagatgaagagtatgagtgtgggggat
ccacggaccttccccttcattgagccccctccacctgccagcctggaaaccgctatcctg
tatctccgagaccagggggcgctggacagctcagaggccctcacccccattgggtctctg
ttggcccagctgcctgtagatgttgtgattgggaagatgttgatcctgggttccatgttc
agcctggcagagcctgtgctgaccattgctgctgccctcagtgtccagtcaccattcacc
cgcagtgcccagagcagcctggactgtgccacagcccggcggccactggagagtgaccag
ggtgaccccttcacgctcttcaatgtcttcaacgcctgggtgcaggtgaagtctgagcgg
agtgggaactcccgcaagtggtgccgccgccggggtgtggaggaacatcggctgtatgag
atggccaacctgcggcgccagttcaaggagctgttggaggatcatgggttgctaagtggg
gccaagatagtggccccaggggacagctacagtcggctgcagcagcgcagagagcgccgg
gccctgcaccagctgaagcggcagcatgaggagggtggaggacggaggcgcaaggtcctg
cggctgcaggaagatggctgctccagtgatgaggacaatgagggctctgcttcccagagg
cctgacagcgttgacattcaggatgtaaaattcaagcttcggcacaacctggagcagctg
caggcagcagccagctcagcccaggacctgacacgcgaccagctggccttactcaagctg
gtgctggggcggggtctctacccgcagctggctgtgcccgatgcattcaacagtggccgc
aaggactcggaccagatttttcatacccaggccaagcagggcaccgtgctgcatcccacc
tgtgtcttcgccaacagccctgaggtcttgcacacacaggggcaggagacctcaggccgt
gaagggagtgaagatggcaaggaccaaatgaactgcaagcaccaactcctggccttcgtc
tccctgctggagaccaacaaaccataccttgtgaattgcgtccgcatccccgccctccag
tccctcctgctgttcagccggtccgttgacaccaatggtgactgtacccgcctggtggct
gacggttggttggagctgcagctcacagatagtgagagtgccgtccggctcctagcaaca
tccctgcggctccgcgcccactgggaaagtgccttggaccggcaactggcccaccaggcc
cagcgacagaggctggagcaggaggacgaggtggagtcaccagcggtcagtcccaaggag
gtagctgctctgagccgggagctgctgcagttcatggcaaccaaggtcccctacagcctc
cgacggctcactggcctagaagcccagaacctctatgtgggaccccaaaccatcacagcc
gcccctaatctgcctggtctctttggaaactctaccctgtccccccatcccaccaagggg
ggctatgctgtctctgattttctcacctataactgcctcacgagtgacaccgacctgtac
agtgactgtctgcgctccttctggacctgcccgcactgcggcctgcacatgccgttcaca
cccctggagcgtatggctcatgagaacacctgccccgaggccccgaaggatgatccaggc
tctgaggaggctgctcctgccccaccgcagaagacctcagccctgcagaggccctaccac
tgccaggtgtgcggggaggacttcctcttcactcccactgaggtgctgagacaccgaagg
cagcatgtgtga
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