Arvicola amphibius (Eurasian water vole): 119821368
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Entry
119821368 CDS
T08327
Symbol
Ccdc88b
Name
(RefSeq) coiled-coil domain-containing protein 88B
KO
K25813
coiled-coil domain-containing protein 88B
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aamp04812
]
119821368 (Ccdc88b)
Cytoskeleton proteins [BR:
aamp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
119821368 (Ccdc88b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
119821368
NCBI-ProteinID:
XP_038196288
LinkDB
All DBs
Position
1:complement(150677567..150693160)
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AA seq
1477 aa
AA seq
DB search
MEGAKGPRLKDFLSGSLATWALGLAGLVGEAEESAGTEEEDKGPLCTEKRFLQLSDGALL
LRVLGIIAPSSRGGGLRMVRGHDSPAACRMWNLHHLWGRLRDFYQEELQLLILSPPPDLQ
TLGFDPLSEEAVDELEGILRLLLGASVQCEHRELFIRHIRGLSLDVQSELAAVIQEVTQP
GAGVVLALAGPESGELMAVELEMQLRNLMGTMSRLVRERDLEAQRLAELLLEREPARLLL
PEAPANASAEGPSHHLALQLTNAKAQLRRLRQEVEEKAELLLDSQAEVQGLEAEIRRLRQ
EAQALSGQAKRAELYREEAEALRERAGRLPRLQEELRRCRERLQAAEVFKGQLEEERVLS
GALEASKAMLEEQLEVARERSARLHETQRENLLLRTRLGEAHAELDSLRHQLEQLVEENV
ELELELQRGLEPPPSSPGEAPLPGTAPSLQDEVREAEAGRLRTVERENRELRGLLQMLQE
QLGSQHPLLEEQSKDSVLAVLNGASLTPMTPDHSLKNWACQKGDEDSDSLDPTSSASDSD
ITRSPECPQAPDSHPEATESSLKMVSQDPQTSAPTPQESDPTVETHGSPEKTSHRVSLQG
PIVLAPPLGPEMRTEVQEFLGETGSREALQGELVPEAQVPKQESPQCRPRSSEFKLPEPL
KDHKTLDQEGLELSEHQTETGGQEQRLKGLVSTPVPQKPPQTSEEAPDAWSREESILGET
LASAVPEEQALREEVAQLRREVVDLEAKLQAQAQRLEARSAEAICLSEELAQAHKAEAEA
HQEAETQAREQARLREALDTASLELEAASREREALGEALAAAGRERRQWEREGPRLRAQT
EAAEQQVQTLESQVRRHLEEAEREHLEKQALREELEKAMVRGQELGARLEHLQRELEQAA
LERQEFLREQESQHQRYQGLEQRLEAELQAAATSKEQALMELKARSLKLEEELIQLRQYP
MGLAAEVRAQPRTVETQSGRLIEVERSNATLVAEKAALQGQLQHLEGQLGSLQGRAQELL
LQSQRAQEHSSRLQAEKSMMEMQGQELHRKLGVLEEEVRAARRAQEETRGQQQALLRDHE
ALAQLQRRQETELEGLLGRHRDLKANMRALELAHRELQGRHEQLQAQRASVEAQEVALLA
ERERLMQDGQRQRGLEEELRRLQNEHDRAQKLLAEVSRERGELQGERGELRARLARLELE
RAQLEMQSQQLRESNQQLDLSACRLTTQCELLTQLRSAQEEENRQLLAEVQALSRENREL
LERSLESRDHLHREQREYLDQLNALRREKQKLVEKIMDQYRVLEPGPLPRTKKGSWLADK
VKRLIRPRREGALHGGPRLGADGAGSTESLGGPLETELPEGREADGTGSSSPAPMRRAQS
SLCLGDETLAGGQRRRLSSRFPVGRISESFSPGDTPRQRFRQRRPGPLGAPSAHGKGSGV
EWDGSIKTLQEHETDASREALQEQKPEKHPLTPSLSQ
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atggagggggccaaggggcctagactcaaagacttcctgagtgggagtctggccacctgg
gcgctgggactggctgggctggtgggggaggcagaggaatcagcggggacagaggaggag
gataaggggcctctttgtacagagaagagattcctgcagctgagtgatggggccttactc
cttcgggtgctgggcatcattgctcctagttcccgaggaggaggacttcggatggtcagg
ggccatgatagtcctgcagcctgtcggatgtggaacctccatcatctgtggggacgactg
agagatttctatcaggaggaactgcagctgctgatcctgtcaccgcccccagacctccag
acattggggtttgaccccctttcagaagaggcagtggatgagctggaaggcatccttcgg
ctgttgttgggggcctcagtgcagtgtgaacaccgggagctcttcatccgtcacatccgg
ggcctcagtcttgatgtccagagtgagctggctgctgtaatccaagaggtgacgcagcct
ggtgctggtgtggtactggctctggctggaccagagtctggagagctgatggctgtggag
cttgagatgcagttacggaacctgatggggacgatgtccaggctggtgcgagagcgtgat
ctggaggcacagcggttggctgaactgcttctggagcgggagccagcccgcttgctgttg
ccggaagctcctgctaatgcttctgcggagggtccctcgcaccatctggctctgcagctg
accaacgccaaggcccagctgagacgactgcggcaggaggtggaagagaaggccgagctg
ctgctggactcccaagcagaggtgcagggcttagaggctgaaattcgaaggctccgccag
gaggcccaggcactgtccggacaagccaaacgcgccgagctctaccgcgaggaggcagag
gcactgcgcgagcgggccggccgcctgccacgcctgcaggaggagctgcggcgctgtcgt
gagaggctgcaggctgctgaagtcttcaagggccagctggaggaggagcgggtgctttct
ggggccctggaggcctccaaggcgatgctggaggaacagctggaggtggcccgagagcgc
tcagccaggctgcatgagacccagcgggagaacctgctgctgcgcaccaggctgggcgag
gcccatgcggagctggactctctgcggcatcagctggagcagctggtggaggaaaatgtg
gagctggagctggagcttcagaggggcctggagccacccccaagctcccctggggaggcc
cccctacccggaacagcaccctcactgcaagatgaggtgagggaagcagaggctgggcgg
ctaaggacagtggagcgggagaatcgggagcttcgaggcctgctgcagatgctccaggaa
caacttggcagtcagcaccctctactggaagagcagagcaaggactccgtgctggctgtg
ctcaatggggcttccctgactcccatgaccccagatcacagcctcaaaaattgggcttgc
cagaagggagatgaagactctgactccttggacccaacttcctcagcgtcagactctgat
atcacaaggtcacctgagtgtccgcaggctcctgattcacacccagaggcgacggagagt
tctctcaagatggtttctcaggatccccagacctcagccccaactcctcaagaatcagac
cctactgtggagacacatgggtctccggagaagaccagccacagagtctctctccagggc
cccattgtcttggccccaccactgggtccagagatgagaactgaggtgcaggagttccta
ggagagactggaagcagggaggctctccaaggggaactggtgcctgaggcccaggtccca
aaacaggagagccctcaatgcaggcccagatcttcagagttcaaactcccggagccgctg
aaggatcacaagacgctggatcaggaggggctagaactgtccgagcaccagacagagaca
ggagggcaagaacagaggctcaaggggttggtcagcacaccagtccctcagaaaccgccg
cagacatcagaagaggctcccgatgcctggtccagggaggagtcaatcctaggtgagacc
ctggccagtgctgtcccagaggagcaggccctcagagaggaggtggcacaattaagaagg
gaggttgtggaccttgaggctaaactacaagctcaggcccaaagactggaggcccgaagt
gcagaggctatctgcctctctgaggagctggcccaagcacacaaagcagaggctgaggcg
caccaggaggcagagacccaggcccgggagcaggcccgtctgcgtgaagccctggacaca
gctagcctggagctggaagctgcatcccgagagcgggaggcactgggagaggcactagca
gcagcaggccgtgagcgaaggcagtgggaacgtgagggacccaggctgagggctcaaact
gaggccgctgagcagcaggtgcagactctggagagccaggtccgtcgtcatctggaggag
gcggagagggagcatctggagaaacaagccctcagggaggagctagagaaggccatggta
cggggccaggagctgggggccaggctggagcatctgcagcgagagctggaacaggcagcc
ttggagcgccaggagttccttcgagaacaggagagccagcaccagaggtaccagggcctg
gagcagcggctggaagctgagctgcaggcagcggccaccagtaaggagcaggctttgatg
gagctcaaggcccgatccctgaagctggaggaggagctgattcagctgcgacagtacccc
atggggctggcggcagaggtgagagctcagcctcggactgtggagacccagagtggccgg
ctcattgaggtggagcgaagtaatgccacactggtggccgagaaggcggctctgcagggg
cagctgcagcacctggaggggcagctagggagcctgcagggccgggcacaggagctcctg
ctacagagtcagcgggcacaggaacacagcagccgcctgcaggctgaaaagtctatgatg
gagatgcagggccaggagctgcacaggaagttgggggtgctagaagaggaggtgcgggca
gcaagacgggcccaggaggagactcgtgggcagcagcaggctctgcttcgagaccatgag
gccctggcccagctgcagcggagacaagagacggagctggagggactgctgggacggcac
cgagatctcaaggccaatatgcgcgcgctggagctggcccaccgcgagctgcagggccgg
catgagcagctgcaggcccagagggccagtgtggaagcacaagaggtggccttactggca
gagcgtgagcgcctgatgcaggatgggcaacggcagcggggcctggaggaggagctgcgg
agacttcagaatgagcacgacagagctcagaagctactggctgaggtgtctcgcgagcga
ggggagctccagggtgaacgtggggaactgcgggcccgcctggcgaggctggaactggag
cgggcacagctggagatgcagagccagcagctgcgtgagtccaaccagcagctggacctg
agcgcctgtcggctgacaacacagtgcgagctgctgacacagcttcgcagcgcccaggag
gaagagaacaggcagctgctagctgaggtacaggccctgagccgggagaaccgagagctg
ctggagcgcagtctggagagtcgcgaccacctgcatcgagagcagcgagaatacctggac
cagcttaatgctttacgccgggagaagcagaagctggtggagaaaatcatggaccagtac
cgcgtcctggaacctgggcccctgccccgcaccaagaagggcagctggctggcagacaag
gtgaagcggctgattcggccccggcgggagggggccctccatggggggccacgcctgggg
gccgatggggctggcagcacggagagcctggggggccccctggagacggagctccctgag
ggcagggaggcagatgggacagggtcctcgtcaccggcacccatgcgccgtgcccagagc
tctctctgcttgggagatgagaccctggcaggtgggcagcggcggagactcagctcccgg
ttcccagtcgggcgaatctctgagtcattcagtccaggggacaccccaaggcagcgattc
cgacagcgcaggccaggccccctgggggcacccagtgcccatggcaaaggatctggtgtg
gaatgggatggctccattaagaccctccaggaacatgaaacagatgccagtcgagaggcc
ctccaggagcagaaaccggagaaacatccccttaccccttccctcagccagtga
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integrated database retrieval system
