Arvicola amphibius (Eurasian water vole): 119821499
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Entry
119821499 CDS
T08327
Symbol
Tmc1
Name
(RefSeq) transmembrane channel-like protein 1 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
119821499 (Tmc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aamp02000
]
119821499 (Tmc1)
03037 Cilium and associated proteins [BR:
aamp03037
]
119821499 (Tmc1)
Transporters [BR:
aamp02000
]
Other transporters
Pores ion channels [TC:
1
]
119821499 (Tmc1)
Cilium and associated proteins [BR:
aamp03037
]
Other cilia and associated proteins
Stereociliary proteins
119821499 (Tmc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Toddler
Motif
Other DBs
NCBI-GeneID:
119821499
NCBI-ProteinID:
XP_038196487
LinkDB
All DBs
Position
1:complement(162290522..162432111)
Genome browser
AA seq
757 aa
AA seq
DB search
MPPKKVQIQVEEKEDDTEESSSEEEDKLPRRESLRPKRKRTRDVINEDDPEPEPEDEETR
KAREKERRRRLRRGAEEEEEIDEEELERLKAQLDENRQMIATVKCKPWKMEKKIEVLKEA
KKFVSENEGALGKGKGKKWFAFKMMMAKKWAKFLRDFENFKAACVPWENKIKAIESQFGS
SVASYFLFLRWMYGVNMVLFILTFSLIMLPEYLWGLPYGSLPRKTVPRAEEASAANFGVL
YDFNGLAQYSVLFYGYYDNKRTIGWLNFRLPLSYFLVGIMCIGYSFLVVLKAMTKNIGDD
GGGDDNTFNFSWKVFCSWDYLIGNPETADNKFNSITMNFKEAIIEERAAQVEENVHLIRF
LRFLANFFVFLTLGASGYLIFWAVKRSQEFAQQDPDTLGWWEKNEMNMVMSLLGMFCPTL
FDLFAELEDYHPLIALKWLLGRIFALLLGNLYVFILALMDEINNKIEEEKLVKANITLWE
ANMIKAYNDSLSGNTTGPPFFVHPADVPRGPCWETMVGQEFVRLTVSDVLTTYVTILIGD
FLRACFVRFCNYCWCWDLEYGYPSYTEFDISGNVLALIFNQGMIWMGSFFAPSLPGINIL
RLHTSMYFQCWAVMCCNVPEARVFKASRSNNFYLGMLLLILFLSTMPVLYMIVSLPPSFD
CGPFSGKNRMFEVIGETLEHDFPSWMAKILRQLSNPGLVIAVVLVMALTIYYLNATAKGQ
KAANLDLKKKMKMQALENKMRNKKMAAARAAAAGGGQ
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgccacccaaaaaagtgcaaatccaagtggaggagaaagaagatgacacagaagaaagc
tcaagtgaagaagaagacaaactacctagaagagaaagcttgagacccaagagaaaacgg
actagggatgtcatcaacgaggatgatccagaacctgagccagaggatgaagaaacaagg
aaggcaagagaaaaagaaaggcggaggaggctgaggagaggagcggaagaagaagaagag
attgatgaagaggaattagagcgactgaaggcacagttggatgagaatagacagatgatt
gctactgtcaaatgcaaaccttggaaaatggagaagaaaattgaagttctcaaggaagca
aagaaatttgtgagtgaaaatgaaggggctcttgggaaaggaaaagggaagaagtggttt
gcatttaagatgatgatggccaagaaatgggcaaaattcctccgtgactttgaaaacttc
aaagctgcttgtgtcccgtgggagaacaaaatcaaggcaattgaaagtcagtttggctca
tcagtggcctcgtacttcttgttcctgcggtggatgtatggtgttaacatggttctcttc
atcctgacattcagcctcatcatgttaccagagtacctctggggtttaccatatggcagc
ttacctaggaaaacagtcccaagagctgaagaggcatctgcagccaacttcggcgtgttg
tacgacttcaatggcctggcacagtactctgtcctcttttatggctactacgataataaa
cgcacaattggatggctgaatttccggctacctctctcctacttcctggtgggaattatg
tgcattggatacagctttctggttgtcctcaaagcgatgaccaaaaatattggtgatgat
ggaggtggcgatgacaatactttcaatttcagctggaaggtattctgcagctgggactat
ctgattggtaaccctgaaacagctgacaacaaatttaattctatcacaatgaactttaag
gaagccatcatagaagaaagagcggcccaggtggaggagaacgtccacctcatcagattc
ctgaggtttcttgctaacttcttcgtgttcctaacacttggtgcaagtggatacctcatc
ttttgggctgtgaagcgatcccaggaatttgcacagcaagatcctgacacccttgggtgg
tgggaaaaaaatgaaatgaacatggttatgtccctcctggggatgttctgtcccacactg
tttgacttatttgctgaattggaagattaccatcctctcattgctctgaagtggctcctg
gggcgcatttttgctcttcttctaggcaacctgtatgtatttattcttgccttgatggat
gagattaacaacaagattgaagaggagaagcttgtgaaggccaatattaccctgtgggaa
gccaacatgattaaggcttataatgactctctctctgggaacaccacaggaccaccgttt
tttgttcatcctgcagatgtacctcggggaccctgctgggaaacaatggtgggacaggag
tttgtgcgactcaccgtttctgatgttctgaccacttacgtcacgatcctcattggtgac
ttcctcagagcatgctttgtgaggttttgcaactactgctggtgctgggatttggaatac
ggatatccctcatacacagaatttgacatcagtggcaatgtcctcgctctgatcttcaac
caaggcatgatctggatgggctccttctttgccccgagccttccaggtatcaacatcctc
aggctccacacatccatgtatttccagtgctgggctgtgatgtgctgcaatgttcccgag
gccagagtctttaaagcttccagatccaacaatttctaccttggcatgctgctgctcatc
ctcttcctgtccaccatgcccgtgctctacatgatcgtctccctcccaccatcctttgat
tgtgggcccttcagtgggaaaaacaggatgtttgaagtcattggcgagaccctggaacat
gatttcccaagctggatggcgaagatcctgcggcagctttctaaccccgggctggtcatt
gctgtcgttctggtgatggctttgaccatctattatctcaatgctaccgccaagggccag
aaagcagcaaatctggatctaaaaaagaagatgaaaatgcaagctttggagaacaaaatg
agaaacaagaaaatggcagctgcgcgagcagctgcagctggtggtggccagtaa
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