Arvicola amphibius (Eurasian water vole): 119821538
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Entry
119821538 CDS
T08327
Symbol
Tmc4
Name
(RefSeq) transmembrane channel-like protein 4
KO
K21988
transmembrane channel-like protein
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aamp02000
]
119821538 (Tmc4)
03037 Cilium and associated proteins [BR:
aamp03037
]
119821538 (Tmc4)
Transporters [BR:
aamp02000
]
Other transporters
Pores ion channels [TC:
1
]
119821538 (Tmc4)
Cilium and associated proteins [BR:
aamp03037
]
Other cilia and associated proteins
Stereociliary proteins
119821538 (Tmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
RSN1_7TM
Motif
Other DBs
NCBI-GeneID:
119821538
NCBI-ProteinID:
XP_038196550
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All DBs
Position
8:complement(65208050..65221442)
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AA seq
702 aa
AA seq
DB search
MEELPREAWGQSRDWSSSAKARTGPSLASVLNNLPSAATLRYRGPGVLPWGTPDEDEDED
EGGGRSSQAFSETAQMESHPSRELPWPMQARREHRKRQAREQVASGSESKAAHWTRQLSK
TKGKMKEGFQTIQPWAWTLKKIGGQFGAGTESYFSLLRFLLFLNLVASVIEVCMKLIPTW
LEGTPPGPPSPNISSLCGSYTPQAQGLVTFPTQLFNLLSGAGYLEWSPLFYGFYPPRSNL
AITYLCSVFVIGLIYLLCILHRSVSGLKETLLAETDVLTSYSHRVFSAWNFGLHGEVHVR
LRQRILLYELQVELEEAMVRRRAAEQTLGQRVKVWSVRALLNLLILALLGAAFYGIYWAT
EYTVTLQETPVVQQNPLLKLLVDYLPSISISVFNFVLPIVFKFITSLEGYTRSRQIALIL
IRTVFLRLVSLVFLLVSLWNQITCGGNKEAEGCKTCGYNYRELPCWETRLGQEMYKLVVF
DLLMGLLVMLLVQFPRKIFCGLCPGALGRMMGTLEFQVPDEVLGLIYAQTVVWVGSFFCP
LLPLINTAKFLILFCLKKMALFSIYSPASRTFRASTANFFFPLVLLVGLAISAVPVLYSI
FLIPPSKLCGPFQGKSSIWVQIPESIKSLPQTAQNFFYFLGTQAFAVPLLILSCILMAYT
VALANSYGRLISELKRQIETEAKNKVFLAQRAVALSSANGSL
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacttcccagggaagcctggggccagtccagggattggtctagctccgcgaag
gcaagaacaggcccatcactggcctctgtgctgaataacctcccaagtgctgctactctt
cggtaccgtggccctggtgtgctcccttgggggacaccggatgaggatgaggatgaggat
gagggtggaggaaggagttctcaggccttttcagaaactgcccaaatggaatctcaccct
tcacgggaacttccctggcctatgcaggcaaggcgggaacacaggaagaggcaggctaga
gagcaggtggcctctggctctgaatctaaggctgcccattggacccgacagctttccaag
accaagggaaaaatgaaagaaggctttcaaactatacagccatgggcgtggacgctgaag
aagattgggggccagtttggagcaggcactgagtcctacttctccctgctgcgcttcctg
ctctttctcaacctggtggcatctgtgattgaagtctgcatgaagttgatccccacctgg
ttggaagggactcctccaggtccccctagccctaacatctcttcactctgtggttcctat
accccccaagctcagggcctggtcaccttccccactcagctcttcaacttgctctctgga
gcgggttacctagaatggtctcctctgttctatgggttctacccgccccgatctaacctg
gccatcacttacctgtgctccgtctttgtcatcgggctcatctacttgctgtgcatcctg
caccgttcggtgtccggattgaaggagactctgttggccgagacagatgttctgaccagc
tatagtcatcgggtgttctcagcttggaattttggcctccacggggaagtgcacgtgcgg
ctgcgccaacgcatccttttgtatgaactgcaggtggagctggaggaagccatggttagg
cgccgtgctgcggaacagacgctgggccagagagtcaaggtgtggtcggtgagggctctg
ctcaacctgctgatcctcgcgctcctgggggcagccttctatggcatctactgggctaca
gagtacaccgtgacgctgcaggagacaccagtggttcaacaaaatcccctcctcaagctt
ctggtggattatcttccatccatttccatctccgtgttcaacttcgtgctgcctattgtg
ttcaagttcattacttcactagagggctacactcgcagccgccaaatcgccttgatcctg
attcggactgtgtttttgcgtctggtctccctggtgttccttctagtttctctgtggaat
cagatcacatgtgggggaaacaaggaggcagaaggatgcaaaacctgtggctacaattac
agagaacttccgtgctgggagactcggctgggccaggagatgtacaaacttgtggtcttt
gatctgctgatgggcctgttggtcatgctgttggtccagtttcctaggaagatattctgt
ggcctctgtcctggggcattgggtcgtatgatggggactctggagttccaggtgcccgac
gaggtgttggggctcatctacgctcagaccgtggtctgggtgggaagctttttctgccct
ttactacctttgatcaacaccgccaagttcctgatactcttctgtctgaagaagatggcg
ctcttctccatctactcaccggcctcacgcaccttccgagcctccacagcaaatttcttt
ttccccctggtgctccttgtgggtctggcaatctctgctgtcccggtgctttacagtatc
ttcttgatcccaccttctaaactgtgtggcccattccaagggaagtcgtctatttgggtc
cagatccccgagtccattaaaagcctccctcagactgcccagaactttttctactttctg
gggacccaggcttttgctgtaccccttctgatcctctcttgcatcctgatggcgtataca
gtagccctggctaactcttacggacgcctcatttctgagctcaaacgccagatcgagacg
gaagcgaagaataaagtcttcctagcccagcgagctgtggctctaagctcagcgaatgga
agtctctga
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