Arvicola amphibius (Eurasian water vole): 119821898
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Entry
119821898 CDS
T08327
Symbol
Tdrd12
Name
(RefSeq) LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119821898 (Tdrd12)
Enzymes [BR:
aamp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
119821898 (Tdrd12)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Gene silencing
piRNA pathway
119821898 (Tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
Helicase_C
Motif
Other DBs
NCBI-GeneID:
119821898
NCBI-ProteinID:
XP_041911548
LinkDB
All DBs
Position
8:84021294..84091175
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AA seq
1332 aa
AA seq
DB search
MLEVLVLKIEDPGCFWVIIKGCSQFLEQEVDYQKLNSAMNDFYSSMCXDIEIKPLMLEEG
QVCVVYCQELKCWCRAVIKSIVSSADHYLAECFLVDFAKCIPVKSKNIRVAVESFMQLPY
RAKKFRLYCTKPVTLHIDFCEDSAEIIPATKWDSAAIQYFQNILRGKARGVTHCFELIHV
VAYTSVARCLKIHMHGCDPLHGAPEVTLSPCVYPCDCRPSDTVFVALHSVRQGLTLSPWF
IHSGESSSQVCVNDDLVAKNFAYYVSPMGNKSLNTLEKPRPSLNSVPCSSKLSPSLTLWP
MLMQGKDRRGMENKAEKYKDSLRDSPKVLFEKKQQCPPLKHMNECIESSAYWPTKRGITI
YADPDIPAASGFSQKPNVKLPRLTEKRDCDEKNGCVKLLQFLNPDPLRADEISDLQQLQK
VKLGTLQPGVVLRNRIEPCLTLEKSPLSADLKKALQRNKFPGPSHTASYSWPPVARGCDV
VVISHCGNDPSLYLPPLLTVLQMGGCYKSLPSRNGPLAVIVCPGWKKAQFIFELLGDYSM
SSRPLHPVLLTIGLHKDEAKNMKLPRGCDVIVTTPHSLLRLLTYRSLLFLRLCHLVLDEV
QVLFFEANEQMLAILDNFKKNVEVEERESAPHQIVAVGVHWNRHIDHLVREFMKDPYVVI
TALEEAALYGNVQQVVHLCLECEKTSTLLQVLDFVPSQAQKTLIFTCSVAETETVCKVVE
SNSIFCLKMHKEMAFNLKSILEQWKKKLSPGSHVVLTLTDDCIPLLAITDATCVVHFSFP
SSPKVFGGRLYCMSDHFQSVTEQGSPAEQGDKKTKSVLLLTERNASQAVGVLRYLERADA
KIPSELYEFTAGVLEAKEDKKARRPLCSYLKSFGFCKDKRICPDRHHINPEMDIPRKLSS
EALPVSGHVRIIPFYVSNATNYFGRIIDKHLDLYATLNAEMSEYFKDPSNKTAAEKVESL
GLYGLEEKTLFQRVQVLEVSQKEDNWGLASVLVKFIDEGRTKLIARDKLLLLPEKFHTLP
PQAVEFIVCRVRPADSEIEWNPKVTRYIHHKIVGKMHDAKVVLALGNTLWIDPMVHVTKL
SNLKTSIIDYNVRAEILSMGMGIDNSEHIEQLKKLCKEAKLPAFEDLLGQTSTPTTVEDA
MCLQGTQQGDGDTEKSAASKVDLDTQKAEVLSEDTGSDSISRTPQPHLRSFHPQVKWFQK
DDVLILKIKIRNVKDYKCKFFTDRVIFSAWVGDKFYLADMELQGDIRKDDCKCVIKDDEP
LITLAKEKRARWRGLLKQRHPNVAFDFDHWEECEEDSPFSKVVNSKNLSCKVAVLAENSG
TSSDTTGGSDSE
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgctggaggtcctggtgctaaagattgaagatccaggttgcttttgggtaattataaaa
ggatgtagtcaatttttagaacaagaagtcgactatcaaaaactgaacagtgccatgaat
gacttctatagcagcatgtgtncagacatagaaataaagccgttaatgctggaagaaggg
caggtgtgtgtggtatactgtcaggagctgaagtgctggtgcagggctgtgattaagtca
atcgtctcttccgcagaccattacctggcagagtgtttccttgtggattttgccaagtgc
attccagtaaaatccaaaaacatccgagtcgcagtagaatcctttatgcagcttccttat
agagcaaaaaagttcagactttattgtaccaagcctgtgacattgcacattgacttctgt
gaggacagcgctgagattatacctgccacaaaatgggacagtgcagctatccagtacttt
cagaacattctaagaggtaaggccaggggtgttacacactgctttgagttgatacatgtg
gtagcttacacttctgttgccagatgtctgaagatccacatgcatgggtgtgaccccctt
catggtgctcctgaagttacattgagtccatgtgtgtatccatgtgattgtaggcccagt
gatactgtctttgtcgctctccactctgtgaggcagggtcttacactgagtccttggttc
attcattctggagagtctagcagccaggtttgtgtaaatgatgatcttgtcgcaaagaac
tttgcttattatgtgtcacccatgggaaataaaagcctcaatacgttggagaagcccaga
cccagtctcaattcggtgccctgctccagtaagctcagcccatcacttactctgtggcca
atgcttatgcaagggaaagaccgtcgtggaatggaaaataaagctgaaaaatacaaggat
tccttgagagactcacctaaagttctgtttgagaagaagcagcagtgcccccctttaaaa
cacatgaacgagtgtattgaatcttcagcatactggccaactaaaagaggcataactata
tatgctgatccagatattccagcagcaagtgggtttagccagaaacccaatgtgaagctg
ccgcggttgacggagaagagagactgtgatgagaagaacggctgtgtgaaattactacag
tttttaaaccctgatcctttgagagctgatgagatctctgacctgcagcagttgcagaag
gtgaagctgggcacactgcagcctggtgtggtactccggaacaggatcgagccctgtctg
accctggagaaatcccctctgtcagcagatctgaagaaggctcttcaaagaaacaagttc
ccgggacccagccacactgcatcttactcttggccccctgttgcgcgtggctgtgacgtg
gtggtcatctctcactgtggaaatgacccttcattgtacctgccaccgctgcttacggtt
ttgcagatggggggctgctacaagtcattaccaagtagaaatggacctcttgcagtcatc
gtgtgtcctgggtggaaaaaggcccagtttatttttgagttattgggagactatagcatg
tcctccaggcctcttcatcctgtgttactaacaattggacttcacaaagatgaagccaaa
aatatgaagcttccaagggggtgtgatgtgattgtcacaactccacacagcctcttgaga
cttctcacgtaccgaagcctgttgtttcttagactctgccacctggttctggatgaagtg
caagtattgttctttgaagctaatgagcaaatgcttgccatattagataactttaaaaaa
aacgttgaagtggaagagcgggagtctgcaccacaccagattgtggcagtgggtgttcac
tggaacagacacatcgaccatctagtcagagagttcatgaaggatccctatgtcgtgatc
accgccctggaggaggctgccctctatggcaatgtccagcaggtggtgcacctgtgcctg
gagtgtgagaaaacctcgactttacttcaggttcttgattttgttccaagtcaggcccag
aagaccttgatcttcacctgctctgtggctgaaacagaaactgtgtgtaaggtagtggaa
agcaattcaatattttgcttgaaaatgcataaagagatggcttttaacttaaaaagtatt
ttagaacagtggaagaagaagctaagtcctggctctcacgttgtattaaccttaacagac
gactgcatacccctcctggctatcaccgacgccacatgtgtagttcacttcagctttcct
tcttccccaaaagtgtttggtggacgcctgtactgcatgtctgatcattttcagagtgta
actgaacagggttctcctgcagagcagggagataaaaaaaccaaatctgtcttgttgctg
acggagagaaatgcaagccaagctgttggtgtcctgcgatacttggaacgagcagatgcc
aaaatcccatcagagctgtatgagtttactgctggggtcctggaagccaaagaagataag
aaggccagaagacctctttgttcatatcttaagagttttggcttttgcaaagacaaaagg
atctgccctgaccggcaccacattaatccggaaatggatatcccaaggaagttatccagc
gaagctctgccagtgtctggacacgttaggataatacccttttacgtttcaaatgcaacc
aattactttggtcgtataattgataaacacttggatctttatgcaactctcaatgcggaa
atgagtgaatattttaaggatcccagtaacaaaacagctgctgaaaaggtggagagtttg
gggttgtatggattagaagagaaaacacttttccagagggttcaagtattggaggtgagc
cagaaggaagataactggggtttggcgagtgtcttggtgaaattcatagatgaaggcagg
accaagctcatcgcgagagacaagctgctgctgctcccagagaaattccacactctgccc
cctcaggctgtggagttcattgtttgtagggtgagaccagctgacagtgaaattgaatgg
aacccaaaggttactagatacattcatcataagattgttgggaaaatgcatgatgccaaa
gtggttctagccttgggaaatacgctttggattgatccgatggtgcatgttacaaaacta
tcaaatctaaaaacctctatcattgattataatgttcgagctgaaattttgtccatggga
atgggtattgataattcagaacatatagaacaactgaaaaaactatgcaaagaagccaaa
cttccagctttcgaggaccttctgggccagacctcgacacctaccacagtggaagatgcc
atgtgtctgcagggcactcagcagggagatggagacacagaaaaaagtgctgcttccaag
gtggacttggacacccagaaggctgaagttttatctgaagacactggcagtgactccatc
agcagaactccacaaccacacctgaggagctttcacccacaggtaaagtggttccagaaa
gatgatgtgctcatcttaaagataaagataaggaatgtcaaagattataagtgtaaattc
tttacagacagagtcattttcagtgcctgggtaggagacaagttttacttggctgatatg
gagctgcaaggtgacataaggaaagatgactgcaagtgtgtaattaaagacgatgaacca
ctaatcacacttgcaaaggaaaagagggcacgctggcgcggcctgctcaagcagaggcat
cctaatgtggcttttgactttgatcactgggaggaatgtgaagaggacagccccttctcc
aaggttgtaaattctaaaaacctgtcctgcaaagtggcagtgttggctgagaacagcggc
acctcttccgacactactggtgggagtgacagcgagtga
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