Arvicola amphibius (Eurasian water vole): 119822308
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Entry
119822308 CDS
T08327
Symbol
Pkd2
Name
(RefSeq) polycystin-2 isoform X1
KO
K04986
polycystin 2
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aamp03037
]
119822308 (Pkd2)
04040 Ion channels [BR:
aamp04040
]
119822308 (Pkd2)
Cilium and associated proteins [BR:
aamp03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
119822308 (Pkd2)
Ion channels [BR:
aamp04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
119822308 (Pkd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Fer4_24
EF-hand_1
EF-hand_7
CBP_BcsS
SU10_portal
Motif
Other DBs
NCBI-GeneID:
119822308
NCBI-ProteinID:
XP_038197311
LinkDB
All DBs
Position
1:complement(3961492..4000336)
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AA seq
977 aa
AA seq
DB search
MVNSNRVQPQPPGDAKRSPAPRAPGPGRLAAGGAAVGGGLAVPGGLREQRGLEIEMERIR
QAAARDPPAGASASPSPPLSSCSRQAWSRDNPGFEAEEDDDDDEVEGEEGGMVVEMDVEW
RPGSRRSASSSAVSSTGARGRALGSYRGTGHPSGRRRRLEDQGAPCPSPAGGGDPLHRHL
PLDGQPPRVAWAERLVRGLRGLWGTRLMEERSTNREKYLKSVLRELVIYLLFLVVLCILT
YGMMSSNVYHYTRTLSQLFIDTPVSKTEKANFKTLSSMEDFWKFAEGSFLDGLYWKAEAG
NHTQADNRSFIFYENLLLGVPRLRQLRVRNGSCSIPRDLRDEIKECYDVYSVSSEDRTPF
GPRNGTAWIYTSEKDLNGSSHWGVIATYSGAGYYLDLSRTREETASQIAGLRRNFWLDRG
TRATFIDFSVYNANINLFCVVRLLVEFPATGGVVPSWQFQPVKLIHYATAFDFFLAACEI
IFCLFILYYVVEEILEIRIHRLHYFRSFWNCLDVVIVVLSIVAVVINIYRMSNVEGLLRF
LEDQNTFPNFEHVAYWQIQFNNIAAVNVFLVWIKLFKFISFNRTMSQLSTTMSRCAKDLF
GFTIMFLIVFLAYAQLAYLVFGTQVDDFSTFQECIFTQFRIILGDINFAELEEANRVLGP
LYFTTFVFFMFFILLNMFLAIINDTYSEVKSDLAQQKAEMELSDLIRKGYQKALVKLKLK
RNTVDDISESLRQGGGKLNFDELRQDLKGKGHTDAEIEAIFTKYDQDGDQELTEREHQQM
RDDLEKEREDLDLEHSSLPRPMSSRSFPRSLDDSEEEDDEDSGHSSRRRGSISSGVSYEE
FQVLVRRVDRMEHSIGSIVSKIDAVIVKLEIMERAKLKRREVLGRLLDGVAEVSSHELRT
LTGGQVFIDRTGGQVFIDRTGGQVFIDRTGGQVFIDRTGGQVFIDRTGGQVFIDRTGGQV
FIDRNGGQVFIDRNGHT
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggtgaactccaaccgcgtgcagccgcagccgcccggagatgcgaagcgctcgcccgcg
ccgcgagctccgggacccggccggctggctgcgggaggcgcggcggtggggggcggcctg
gcggtccccggaggcctccgggagcagcggggcctggagatcgagatggagcgcatccgg
caggcggctgcgcgggatcccccggccggagcctcggcttccccatcccctccgctctcg
tcgtgctcccggcaggcgtggagccgcgataacccgggcttcgaggccgaggaggacgat
gacgacgacgaggtggaaggggaggaaggaggaatggtggtggagatggacgtggagtgg
cgtccgggcagtcgcaggtcggcctcctcctcggctgtgagctcgacgggagcccgcggc
cgagccctggggagctaccggggcaccgggcacccgagcgggaggaggcgccggctagag
gaccagggcgcgccgtgtcccagtcccgcaggcggcggggacccgttgcatcgccacctc
ccgctggatgggcagccgccccgagtggcttgggccgagagactggtgcgcgggctgcga
ggtctctggggaacaaggctcatggaggagcgcagcactaaccgggagaaatacctgaaa
agcgtgcttcgggagctggtcatttacctcctgttcctcgtagtcctgtgcatcttgacc
tacggcatgatgagttccaacgtgtaccactacacgcggacattgtcccagcttttcata
gacaccccagtgtctaaaacagagaaagccaactttaaaactctctcctcaatggaagat
ttctggaagtttgcagaaggctccttcctggatgggctctactggaaggcggaggcgggt
aaccacacgcaagccgataaccgaagcttcattttctacgagaacctgctgctaggagtg
cctcgtctacgccagctcagagtcagaaacggatcctgctccattcctcgggacttgcga
gatgaaattaaagagtgctatgacgtctactctgtcagtagtgaggacaggactccgttt
ggaccgcgaaacggaactgcgtggatctacacgagtgaaaaggacttgaatgggagcagc
cactggggagtcattgcaacttacagtggagcaggctattatttggatctgtccaggacc
agagaggaaacggcttctcagattgccggcctcaggaggaacttctggctggaccggggg
acccgagccactttcattgacttttcagtgtacaacgccaacattaacctgttctgtgtg
gtcagattactggtggaattcccagcaacagggggcgtggtgccctcttggcagttccag
cctgtgaaactgatccactatgccacagcctttgatttcttcctggcagcctgtgagatt
atcttttgtttatttatcctttactatgtggtggaagagatattggagattcggattcac
agactacactatttcaggagtttctggaattgtctggatgttgtgattgttgtgttatcc
atagtggctgtggtaattaacatttaccgaatgtcaaatgtagagggtctattgcggttt
ctcgaggatcaaaatactttccccaactttgagcatgtggcatactggcaaatacagttc
aacaatatagccgctgtcaatgtatttttggtctggatcaagctcttcaaattcatcagc
tttaacaggaccatgagccagctctccacaaccatgtctagatgtgccaaagacctcttt
ggattcaccattatgttcctcattgttttcttggcatatgctcagttggcataccttgtc
tttggcactcaagttgatgacttcagtactttccaagagtgtatcttcactcagtttcgc
atcattttgggcgacatcaacttcgcagagctcgaggaagcgaaccgggttttggggcca
ctttatttcactactttcgtgttctttatgttcttcattcttctgaacatgtttttggcc
atcatcaatgacacttattcggaagtgaaatcggatctggcccagcagaaagcggaaatg
gaactctcagaccttatcagaaagggctaccaaaaagcactggtcaaactaaaacttaaa
agaaacactgtagacgacatctcagagagtctccggcaaggtgggggcaagttaaacttt
gatgaacttcggcaggacctgaaagggaaaggccatactgatgcagaaattgaggccata
ttcactaaatatgaccaggatggcgatcaggagctgacggaacgtgagcatcaacagatg
agagatgacttggagaaagagagggaggacctggacttggaacacagctctttgccgcgt
cccatgagcagcagaagtttccctagaagcctggatgactcggaggaggaggatgatgaa
gacagtgggcatagctccaggaggaggggcagcatctccagcggggtttcctatgaagag
ttccaggtgctggtgagacgcgtggaccgcatggagcactccataggcagcatcgtgtcc
aagatcgatgctgtgattgtcaagcttgagatcatggagcgggcgaagctcaagaggcga
gaggtgttagggaggctgctggatggagtggctgaggtgagcagtcatgagcttaggacg
ctgactggtggacaggtctttattgacaggactgggggacaggtctttattgacaggact
ggtggacaggtctttattgacaggactgggggacaggtctttattgacaggactggtgga
caggtctttattgacaggactgggggacaggtctttattgacaggactggtggacaggtc
tttattgacaggaatggtggacaggtctttattgacaggaatggacacacgtga
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