Arvicola amphibius (Eurasian water vole): 119822355
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Entry
119822355 CDS
T08327
Name
(RefSeq) interferon-induced protein with tetratricopeptide repeats 1-like
KO
K14217
interferon-induced protein with tetratricopeptide repeats 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
119822355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_17
TPR_19
TPR_16
TPR_14
TPR_11
TPR_8
TPR_7
TPR_CcmH_CycH
ANAPC3
TPR_Slam
TPR_10
TPR_9
TPR_15
ARM_TT21_C
TPR_MalT
Fer2_3
DUF7017
Motif
Other DBs
NCBI-GeneID:
119822355
NCBI-ProteinID:
XP_038197458
LinkDB
All DBs
Position
1:complement(175190931..175195266)
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AA seq
458 aa
AA seq
DB search
MGENAGTDHVKENLGQLSCHFTWTLLFEDVDIPDLEMRILEQVEFLDVKSPVGMHNILAY
VRHLKGQHEEALQSLKEAEALGQREQLGKRSLVTWGNCAWVHYHMGSLAEAQSYLDKVEN
TCKEFASPFRYRMECAEMHCEEGWALLKCGGQNYRRAMACFAKALEAEPENPEYNTGYAV
AAYREDFDDNNISLEPLRKAVRLNPEDPYIKVYLALKLQDVGETDEAERHIEEALSSASC
QTYVFRYAAKYYRRKDCIDKALELLYMALQTSPESAYLHFQIGLCYRQQMIQLKTSRRQG
SMQEMAQRAISEFQKTVELRPKFDVAYVCLAEVQAEIRQYEEAEANFQIVLDMQNLTSHR
KQDIHLRYGRYQQFHQKSEDKAITHYLKGLKIEETSYARRKLLIALEKVASRWVQQNVRP
VESTSLLGLVHKLKGNTHEALLYYERALRLTGEMNPEF
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgggagagaatgctggtactgatcatgtcaaggagaatctgggtcagctgagctgtcac
ttcacgtggacactgctgtttgaagacgttgacatacctgatttggaaatgagaatcttg
gagcaggtcgagtttctagacgtcaagagcccagtggggatgcacaacatcctggcctac
gtgagacacctgaaaggccagcatgaggaagccctgcagagcctgaaagaagcagaagcc
ttgggccagagagagcagttgggcaagagaagcctggtgacctggggcaactgtgcctgg
gtgcattaccacatgggcagcttggcagaagcccagagctacctggacaaggtggagaat
acttgcaaggaatttgcaagtcccttccgctacaggatggagtgtgccgagatgcactgt
gaggaaggctgggccttgctgaagtgtggaggacagaattatagacgagccatggcctgc
tttgcaaaagctctggaagctgagcctgaaaaccccgaatacaacactggctatgccgtc
gctgcctatcgtgaagacttcgatgacaataatatttctctggaacccctgaggaaggct
gtcaggttaaatccagaagatccgtatattaaagtttatcttgccctgaaacttcaggat
gtaggagaaacagatgaagcagaaagacacattgaagaagccctcagcagtgcatcctgt
caaacctatgtctttcgttatgcagccaagtattaccgaaggaaagactgcatagacaaa
gctctcgaacttctatatatggccttgcagacatcacctgagtctgcctacctgcatttc
caaatagggctctgttacaggcaacaaatgatccaactgaagacatccagaaggcagggc
agcatgcaggaaatggcacaacgggccatttctgagtttcagaagacagtggaactgagg
cccaagtttgatgtagcttatgtttgcttggctgaagtgcaggcagaaattcgccaatat
gaagaagctgaggcaaatttccagatagtgctggacatgcagaaccttacaagtcacaga
aaacaagacatccatctacgctatggccgttatcagcaatttcatcaaaaatcagaagac
aaggcgatcacccactacttaaaaggtctaaaaatagaagaaacgtcctatgcccggagg
aaactactcatagctttggagaaagtggctagcagatgggttcagcagaatgttcgacct
gtggagagcaccagcctccttgggttagtacacaagctgaaagggaacacgcacgaggcc
ctgctatactacgagagggctctgaggcttactggggagatgaaccctgagttctga
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