Arvicola amphibius (Eurasian water vole): 119822408
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Entry
119822408 CDS
T08327
Symbol
Ddx17
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aamp03041
]
119822408 (Ddx17)
Enzymes [BR:
aamp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119822408 (Ddx17)
Spliceosome [BR:
aamp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119822408 (Ddx17)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
SAA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
119822408
NCBI-ProteinID:
XP_038197600
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All DBs
Position
9:38202447..38223541
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AA seq
652 aa
AA seq
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MRGGGFGDRDRDRDRGGFGARGGSGLPPKKFGNPGERLRKKKWDLSELPKFEKNFYVEHP
EVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQC
QGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQ
VQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRC
TYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINV
GNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMR
RDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSS
EDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGG
GGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSTSYRDRSETDRASYANGS
GYGSPNSAFGAQAGQYTYAQGTYGAAAYGTSGYTAQEYAAGTYGASSTTSTGRSSQSSSQ
QFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPPSRK
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggaggcggttttggggaccgggaccgggatcgggaccgtggagggtttggagca
agaggtggtagtggccttcccccaaagaagtttggtaatcctggagagcgtttacggaaa
aagaagtgggatttgagtgaactcccgaaatttgagaagaatttttatgtggagcatcca
gaagtagcaagactgactccgtatgaggttgatgaactccgtcgaaagaaagagatcaca
gtgagaggaggcgatgtctgtcccaagcctgtcttcgctttccatcatgcgaacttccca
cagtatgtaatggatgtgctgatggatcagcattttacagaaccaactcccattcagtgc
caaggatttcctttggctcttagtggccgggatatggttggcattgcacagactggctct
gggaagacattggcgtatttgctgcctgcaattgttcatataaaccaccagccatacttg
gaaagaggagatggcccaatttgtttagtgctggctcctaccagagaacttgctcagcag
gtgcagcaggtggctgatgattatggaaagtgttctaggttgaagagcacatgcatttat
ggaggggctcctaaaggtcctcagattcgagacttggaaagaggtgttgagatttgcata
gccactcctgggcgcctaattgattttctggaatcaggaaagacaaatcttcgccgatgt
acttaccttgtgttggatgaggctgaccgaatgcttgatatgggctttgagccccagatc
cgtaaaattgttgaccaaatcaggcctgaccggcagacactgatgtggagtgcaacctgg
ccaaaggaagtaaggcagcttgcagaggacttcctgcgtgattacacccagatcaacgtg
ggcaatctggagttgagtgccaaccacaacatcctgcagattgtggatgtctgtatggaa
agtgaaaaagatcacaaattgatccaactgatggaggaaatcatggcggaaaaggaaaat
aagactataatatttgtggagacaaagagacgctgtgatgacctcactcgaaggatgcgc
agagatggttggccagctatgtgtattcatggagacaagagtcaaccagaaagagattgg
gtacttaatgagttccgatctggaaaggctcctatactcattgccacagatgtagcctcc
cgtgggctagatgtggaagatgtgaagtttgtgatcaactatgactatccaaacagctca
gaggactatgttcaccgtattggccgaacggcccggagcaccaacaagggcactgcctat
actttctttaccccggggaacctaaagcaggctagagagctgatcaaagtattggaagag
gctaatcaggccatcaatccaaaattgatgcaactggtggaccacagaggcggtggcggc
ggagggggtaagggaggtcgctctcgataccggactacttcttcagccaacaatcccaat
ctgatgtatcaggatgagtgtgaccggaggcttcgaggggtcaaggatggtggccggaga
gattctacaagctaccgagatcgcagtgaaaccgatagagccagttatgctaatggcagt
ggctatggaagcccgaattctgcctttggggcacaagcaggccaatacacctatgcccaa
ggcacctatggggcagctgcttatggtaccagtggctacacagcccaggagtatgctgct
ggcacttatggggctagtagcaccacctcaactgggaggagctcccagagctctagtcag
cagtttagtggtataggccgatctgggcagcagccacagccactgatgtcacagcagttt
gcacagcctccaggagctaccaatatgataggctatatggggcagactgcttaccagtat
cctcccccccctcctccccctcctccttctcgtaaatga
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