Arvicola amphibius (Eurasian water vole): 119822432
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Entry
119822432 CDS
T08327
Symbol
Shank3
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 3 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
119822432 (Shank3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
SAM_1
Ank
Ank_4
SAM_2
SH3_2
Ank_3
PDZ_6
Ank_5
SH3_9
PDZ
SH3_1
FERM_f0
Motif
Other DBs
NCBI-GeneID:
119822432
NCBI-ProteinID:
XP_038197668
LinkDB
All DBs
Position
9:47841330..47900084
Genome browser
AA seq
1799 aa
AA seq
DB search
MQLNRAAVAAAAAPAEPPEPLSPALAPAPAPPGPLPRSAVGGAPAGGQGGPGRRAESPCA
PLSAGNSPGPGASTGMDGPGASAVVVRVGIPDLQQTKCLRLDPTAPVWAAKQRVLCALNH
SLQDALNYGLFQPPSRGRAGKFLDEERLLQDYPPNLDTPLPYLEFRYKRRVYAQNLIDDK
QFAKLHTKANLKKFMDYVQLHSTDKVARLLDKGLDPNFHDPDSGECPLSLAAQLDNATDL
LKVLRNGGAHLDFRTRDGLTAVHCATRQRNAGALTTLLDLGASPDYKDSRGLTPLYHSAL
GGGDALCCELLLHDHAQLGTTDENGWQEIHQACRFGHVQHLEHLLFYGANMGAQNASGNT
ALHICALYNQESCARVLLFRGANKDVRNYNSQTAFQVAIIAGNFELAEVIKTHKDSDVVP
FRETPSYAKRRRLAGPSGLASPRPLQRSASDINLKGDAQPAASPGPTLRSLPHQLLLQRL
QEEKDRDRDSEPEKDIIGPAAGRGSHNKISPSGPGGSGPAPGPGPASPAPPAPPPRGPKR
KLYSAVPGRKFIAVKAHSPQGEGEIPLHRGEAVKVLSIGEGGFWEGTVKGRTGWFPADCV
EEVQMRQYDTRHETREDRTKRLFRHYTVGSYDSLTSHSDYVIDDKVAILQKRDHEGFGFV
LRGAKAETPIEEFTPTPAFPALQYLESVDVEGVAWRAGLRTGDFLIEVNGVNVVKVGHKQ
VVGLIRQGGNRLVMKVVSVTRKPEEDGARRRAPPPPKRAPSTTLTLRSKSMTAELEELEK
LDEILAVAAEPTLRPDIADADSRAATVKQRPTSRRITPAEISSLFERQGLPGPEKLPGSL
RKGIPRTKSVGEDEKLASLLEGRFPRSTSMQDTVREGRGIPPPPQTAPPPPPAPYYFDSG
PPPTFSPPPPPGRAFDTVRSSFKPGLEARLGAGAAGLYDSGAPLGPLPYPERQKRARSMI
ILQDSAPEVGDVPRPVPAATPPERPKRRPRPSGPDSPYANLGAFSASLFAPSKPQRRKSP
LVKQLQVEDAQERAALAVGSPGPVGGSFARDPSPTHRGPRPGGLDYSSGEGLGLAFGGPG
PGPGKERRLEERRRSTVFLSVGAIEGSPPSAELPSLQPSRSIDERILGTGAPTGRDLLLP
SPVSALKPLVSGPSLGPSGSTFIHPLTGKPLDPSSPLALALAARERALASQTPSRSPTPV
HSPDADRPGPLFVDVQTRDSERGPLASPAFSPRSPAWIPVPARREAEKSPREERKSPEDK
KSMILSVLDTSLQRPAGLIVVHATSNGQEPNRLGAEEERPGTPELAPAPMQAATVAEPMP
SPRAQPPGSIPSDPGPGQGSSEEEPELVFAVNLPPAQLSSSDEETREELARIGLVPPPEE
FANGILLATPPPGPGPLPTTVPSPASGKPSSEMPPAPESAADSGVEEADTRSSSDPHLET
TSTISTVSSMSTLSSESGELTDTHTSFADGHTFLLEKPPVPPKPKLKSPLGKGPVTFRDP
LLKQSSDSELMAQQHHAASTGLASAAGPARPRYLFQRRSKLWGDPVESRGLPGPEDDKPT
VISELSSRLQQLNKDTRSLGEEPVGGLGSLLDPTKKSSPIAAARLFSSLGELSTISAQRS
PGGPGGGASYSVRPSGRYPVARRAPSPVKPASLERVEGLGAGVGGAGRPFGLTPPTILKS
SSLSIPHEPKEVRFVVRSVSARSRSPSPSPLPSPSPGSGPSAGPRRPFQQKPLQLWSKFD
VGDWLESIHLGEHRDRFEDHEIEGAHLPALTKDDFVELGVTRVGHRMNIERALRQLDGS
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgcagctaaaccgtgccgccgtcgccgccgccgctgcgcctgcggagcccccggagccg
ctgtcccccgcgctggccccggccccggccccccccggccccctcccgcgtagcgcggtc
ggcggggctccggcggggggtcagggggggccagggcgccgcgcggaatccccgtgcgct
cctctctccgccggcaacagtccgggccccggcgctagcaccgggatggacggccccggg
gccagcgccgtggtcgtgcgcgtcggcatcccggacctgcaacaaacgaagtgcctgcgt
ctggacccaaccgcgcccgtgtgggccgccaagcagcgtgtgctctgcgccctcaaccac
agccttcaggacgcactcaactacgggctattccagccgccctcccggggtcgcgccggc
aagttcctggatgaagagcggctcttacaggactacccgcctaacctggacacgcccctg
ccctatctggagtttcgatacaagcggagagtttacgcccagaacctcatagatgacaaa
cagtttgcaaagctgcacacaaaggcaaacctgaagaagttcatggactatgtccagcta
cacagtacagacaaggtggcccgcctgctggacaaggggctggaccccaattttcatgac
cctgactcaggagagtgccctctgagccttgcggcacagttggacaatgccactgacctc
ctgaaggttcttcgcaacggcggtgctcacctggacttccgaacccgagacgggctaaca
gctgtccactgcgccacccgccagaggaatgcaggggcattgacgaccctgctggacctg
ggggcttcacctgactacaaggacagccgcggcctgacgcccctgtaccatagtgcccta
gggggtggggatgccctctgctgcgagctgctgctccatgaccatgcacagctggggacc
actgatgagaatggctggcaggaaatccatcaggcctgccgctttggacacgtgcaacac
ttggagcacttgctgttctatggggccaacatgggtgcccagaatgcctcgggaaacaca
gccttgcacatctgtgccctctataaccaggagagctgcgctcgtgtcctgcttttccgt
ggtgccaacaaggacgtccgcaattacaacagccagacagcctttcaggtggccattatt
gcagggaactttgagcttgctgaggtaatcaagacccacaaagactcggatgtcgtacca
ttcagggaaacccccagctatgcaaagcgacgacgtctggctggcccaagcggcttggca
tcccctcgacccttacagcgctcagccagtgatatcaacctgaaaggcgatgcccagccc
gctgcttctcctgggcccactctccgaagcctcccacatcaactgctgcttcagaggctt
caggaggagaaagatcgggacagggatagtgagccggaaaaggacatcattggccctgcg
gcaggcaggggtagccacaacaagatcagccccagcgggcccggcggatccggccccgcg
cccggccccggcccggcgtctcccgcgccccccgcgccgccgccccggggcccgaagcgg
aaactttacagtgccgtccccggccgcaagttcatcgctgtgaaggcgcacagcccgcag
ggcgagggcgagatcccgctgcaccgcggcgaggccgtgaaggtgctcagcattggggag
ggcggtttctgggagggaaccgtgaagggccgtactggctggttcccagctgactgcgtg
gaggaagtgcagatgcggcagtatgatacacggcatgaaacacgagaagaccggacaaaa
cgtctcttccgtcactacactgtgggttcctatgacagcctcacttcacacagtgattat
gtcattgatgacaaggtggctatcctgcaaaaacgggaccatgagggttttggcttcgtt
ctccggggagccaaagcggagacccccattgaggaatttacacccacgcccgccttccct
gcgctccagtacctggagtctgtagatgtggaaggtgttgcctggagggccgggcttcga
accggggacttcctcatcgaggtgaatggagtcaacgtcgtgaaggtcgggcacaagcaa
gtagtgggtctcatccgccagggcggcaaccgcctggtcatgaaagtcgtgtctgtgacc
aggaaacccgaagaggatggtgctcggcgcagagccccaccacccccaaagagggccccc
agcaccacgctgaccctgcgctccaagtccatgacggctgagcttgaagaactcgaaaag
ttggatgagatcctggcagttgctgcggagccgaccctgaggccagacattgcagatgct
gactccagggcagccactgtcaagcagcggcccaccagtcggaggattacccctgccgag
atcagctcattgtttgagcgccagggcctcccaggcccagagaagctgccgggctctctg
cggaaggggattccacggaccaaatctgtaggggaggacgagaagctggcatccctactg
gaagggcgcttcccacgcagcacatcaatgcaggacacagtgcgtgaaggtcgtggcatt
ccaccccctccgcagaccgctccaccacccccacccgcgccctactacttcgactcgggg
ccacctcccacattctcaccgccaccgccgccaggccgagcctttgacactgtgcgctcc
agcttcaagccaggcctggaggctcgccttggagcgggggccgctggtctgtatgattct
ggagctcctctgggcccgctgccctaccctgagcgtcagaagcgtgcgcgctccatgatc
atcttgcaggactctgcgccagaagtgggcgatgtcccccggccggtgcctgcagctaca
ccgcctgagcgccccaagcgccggcctcgaccgtccggccctgatagcccttatgccaac
ctgggcgccttcagtgccagtctctttgctccgtcgaaaccacagcgccgcaagagccca
ctggtgaagcagcttcaggtggaggacgctcaggagcgcgcggccctggccgtgggtagc
ccgggtccagtgggtggaagctttgcacgagatccctccccaacgcaccgtgggccccgg
ccgggtggccttgactacagctctggagaaggtctggggctcgcttttggcggcccgggc
cctggccccggcaaggagcggcgcctggaggagcgacgccgttccactgtgttcctatct
gtgggtgccatcgagggtagccctcccagcgccgagctgccatccctacagccctcccgc
tccatcgatgagcgcatcctagggacaggcgcccccactggccgtgatttgctgctcccc
tcccctgtatcagctctgaagccattggtcagtggccctagccttgggccctcaggctcc
actttcatccaccctctcactggcaaacccctggatcctagctcacccctagccctcgct
ctggctgcccgagagcgggctctggcctcgcaaacgccttcccggtcccccacacctgtg
cacagccctgatgctgaccgccctggacccctctttgtggatgtgcagacccgagactct
gagcgagggccgttggcttcaccagccttctcccctcggagcccagcctggattccagtg
cctgctcgcagagaggcagagaaatcccctcgggaagagcggaagtcaccagaggacaag
aaatccatgatcctcagcgtcttggacacgtccttgcagcggccagctggtcttattgtt
gtgcatgccaccagcaatggacaggagcccaacaggctgggggctgaagaggagcgcccg
ggtactccggagctggccccagcccccatgcaggctgcaactgtggcagagcctatgcca
agccccagggcccagcctcctggcagcatcccatcagatcctgggccaggccaaggtagc
tcagaggaagagccagagctggtatttgctgtgaacctgccacctgctcagctgtcctcc
agcgatgaagaaactagggaggagctggcccgcattgggctagtgccaccccctgaagag
tttgccaatgggatcctgctggccaccccaccccctggaccgggccccttacccaccacg
gtacccagcccggcctcagggaagcccagcagcgagatgccccctgcccctgagtctgca
gctgactctggagtagaggaggctgacactcgaagctccagtgacccccatctggagacc
acaagcaccatttccacagtgtccagcatgtccaccctgagctcggagagtggggaactc
actgacactcacacctcctttgccgatggacacacttttctactcgagaagccaccagtg
cctcccaagcccaagctcaagtccccgctggggaaggggccggtgaccttcagggacccg
ttgctgaagcaatcctcggacagtgagctcatggcccagcagcaccatgctgcctctact
gggttggcttctgctgctgggcctgcccgccctcgctacctcttccagagaaggtccaag
ctgtggggggaccccgtggagagtcgggggctccctgggcctgaagatgacaaaccaact
gtgatcagtgagctcagctcccgtctgcagcagctgaacaaagacacacgctccttgggg
gaggaacccgttggtggcctgggcagcctgctggaccctactaagaagtcgtcgcccatt
gcagcagctcggctcttcagcagcctcggtgagctgagcaccatctcagcgcagcgcagc
cccgggggcccgggcggaggggcctcctactcggtgcggcccagcggccggtaccccgtg
gcgagacgagccccaagcccagtgaagcccgcatcgctggagcgggtggaggggctgggg
gcgggtgtgggaggcgcggggcggcccttcggcctcacgcctcccaccatcctcaagtcg
tccagcctctccatcccgcacgaacccaaggaagtgcgcttcgtggtgcgaagtgtgagt
gcgcgcagccgctccccctcgccatctccgctgccctcgccttctcccggctctggcccc
agtgctggcccccgtaggccattccagcagaagcccctgcagctctggagcaagttcgat
gtgggcgactggttggagagcatccacttgggcgagcaccgagaccgcttcgaggaccat
gagatcgaaggcgcacacctgcctgcgctcaccaaggacgacttcgtggagctgggcgtc
acacgcgttggccaccgcatgaacatcgagcgtgcgctcaggcagctggatggcagctga
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integrated database retrieval system
