Arvicola amphibius (Eurasian water vole): 119822460
Help
Entry
119822460 CDS
T08327
Symbol
Vars1
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
119822460 (Vars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
aamp01007
]
119822460 (Vars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aamp03016
]
119822460 (Vars1)
Enzymes [BR:
aamp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
119822460 (Vars1)
Amino acid related enzymes [BR:
aamp01007
]
Aminoacyl-tRNA synthetase
Class I (U)
119822460 (Vars1)
Transfer RNA biogenesis [BR:
aamp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
119822460 (Vars1)
Prokaryotic type
119822460 (Vars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1_2
tRNA-synt_1g
Val_tRNA-synt_C
GST_C_2
tRNA-synt_1e
Jag_N
Arc1p_N_like
Motif
Other DBs
NCBI-GeneID:
119822460
NCBI-ProteinID:
XP_038197721
LinkDB
All DBs
Position
9:124144924..124157628
Genome browser
AA seq
1263 aa
AA seq
DB search
MSILYVSPHPDAFPSLRALIAARYGEAGDGPGWGGPHPRICLQPPPSSRTPLPPPRLPAL
EQGPGGLWVWGAPAVAQLLWPAGLGGPGGSRAAVLVQQWVSYADTELVPAACGATLPALG
LRSPGQDPQAALGALGKALSPLEDWLRLHTYLAGDAPTLADLAAVTALLLPFRYVLDPAV
RRIWGNVTRWFNTCVRQPEFRAVLGEVVLYSGARSVTQQPGLEVTAPQKTAAQLKKEAKK
REKLEKFQQKQKAQQQPPPGEKKPKPEKKEKRDPGVITYDLPTQPGEKKDVSGTMPDSYS
PQYVEAAWYPWWERQGFFKPEYGRPSVSAPNPRGVFMMCIPPPNVTGSLHLGHALTNAIQ
DSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWRERGVNRHQLGREAFLQEVWKWKE
EKGDRIYHQLKKLGSSLDWDRACFTMDPKLSVAVTEAFVRLHEEGVIYRSTRLVNWSCTL
NSAISDIEVDKKELTGRTLLSVPGYKEKVEFGVLVSFAYKVQGSDSDEEVVVATTRIETM
LGDVAVAVHPKDSRYQHLKGKSVIHPFLSRSLPVVFDDFVDMEFGTGAVKITPAHDQNDY
EVGQRHGLEAISIMDSKGALVNVPPPFLGLPRFEARKAVLAALKERGLFRGIKDNPMVVP
LCNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPEAHQRTWHSWMDNIRDWCI
SRQLWWGHRIPAYFITVHDPAVPPGEDPDGRYWVSGRTEAEAREKAAREFGVSVDKISLQ
QDEDVLDTWFSSGLFPLSILGWPNQSEDLNVFYPGTLLETGHDILFFWVARMVMLGLKLT
GRLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSLQGLHDQLLNSNLDPTEVEK
AKEGQKADFPAGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKFAL
RGLGKSFVPLPTSKPEGHESLVDRWIRSRLTEAVRLSNEGFQAYDFPAITTAQYSFWLYE
LCDVYLECLKPVLNGVDEAAAECARQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRTPA
APASLCVTPYPEPSECSWKDPEAEAALELALGITRAVRSLRADYNLTRTRPDCFLEVADE
ATGALASAVSGYVQALASAGVVAVLALGAPAPQGCAVAVASDRCSIHLQLQGLVDPAREL
GKLQAKRSEAQRQAQRLQERRAASGYSAKVPLEVQEADEAKLQQTEAELRKVDEAIALFQ
KML
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcctctacgtctcccctcaccccgacgccttccccagcctccgagccctcatc
gccgcccgctacggggaagccggcgacggccccgggtggggaggtccgcacccccgcatc
tgcctgcagcctcccccgagcagccggactccgctgccgccgcctcgcctgcccgccctg
gagcaggggcccggcgggctgtgggtgtggggggccccggctgtggcgcagctgctgtgg
ccggcaggcctggggggtcctgggggcagccgggcggccgtcctcgtccagcaatgggtc
agctacgccgacaccgagctcgtgccggcggcctgcggggcgacgctgcccgcgctggga
ctccggagtccggggcaggatccccaggctgcccttggggccctgggcaaggccttgagc
cccttggaggactggcttcggctgcacacctacctggccggggatgctcccactctggct
gacttagctgccgtgacagccttactgctgcccttccgatacgttctggaccctgctgtc
cgccggatctggggtaatgttactcgctggtttaacacttgtgtccggcaaccagaattc
cgggctgtgctaggagaagtggtcctgtactcgggggccaggtctgtcactcaacagcca
ggtcttgaagtcactgcaccccaaaaaacagctgctcagctcaagaaagaagcaaagaaa
cgggagaagctagagaaattccagcagaagcagaaggcccagcagcagcccccaccaggg
gagaagaaaccaaaaccagagaagaaggagaaaagggaccctggggtcattacctatgac
ctccctacccaacccggggaaaagaaagatgtaagtggcaccatgcccgactcctacagc
cctcagtatgtggaggctgcctggtacccttggtgggagcgccagggcttcttcaagcca
gagtatgggcgtcctagcgtgtcagcaccaaatccccgaggggtcttcatgatgtgcatc
ccaccccccaacgtgacaggctccctgcacctgggccacgcgctcaccaatgccatccag
gactccctgactcgatggcaccgtatgcgtggggagaccaccctgtggaacccgggctgt
gaccatgcaggcattgccacccaggtggtggtggaaaagaaattgtggagagagcggggt
gtgaaccggcaccagctgggccgcgaggcctttctccaggaggtctggaagtggaaggag
gagaagggtgacaggatttaccaccagttgaagaaacttggcagctccttggactgggat
cgagcctgtttcaccatggaccctaaactgtcagtagctgtaacagaggctttcgttagg
ctccatgaagaaggtgtcatctaccgtagcacccgcctggtcaactggtcctgcaccctc
aattctgccatttctgacattgaggtggataagaaggagctgacgggtcgcaccctgctt
tctgtgcctggctacaaggagaaggtggagtttggggtcctcgtgtcctttgcctacaag
gtccaaggctcagacagtgacgaggaagtggtggtggcaacaactcggattgagacaatg
ctgggagatgtggctgtagccgtgcaccccaaagactctagataccagcacctaaaggga
aagagtgtcattcatccgttcttgtcccggagcctccctgttgtcttcgatgactttgtg
gacatggagtttggcacaggtgccgtgaagatcacccctgcccacgaccagaacgactat
gaggttgggcagcggcatgggctggaggccatcagcatcatggactcaaagggggcgctt
gtcaatgtgcctccacctttcttgggcctgcctaggtttgaggctaggaaggcagtgctg
gctgcactgaaggagcggggactgttccgtggcatcaaggacaaccccatggtggtgccg
ctttgcaaccgctccaaggatgtggtagaacctctgctaaggccgcagtggtacgtgcgc
tgtggggagatggctcaggccgccagtgcggctgtgacccggggcgacctccgtatcctg
cctgaggcccatcagcggacttggcattcttggatggacaacattcgagactggtgcatc
tctcggcagctgtggtggggccaccgaatccctgcctactttatcaccgtccatgaccca
gctgtaccccccggggaggaccctgacgggcggtactgggtgagcggacgtaccgaagca
gaggccagagaaaaggcagcacgcgagtttggcgtgtccgttgacaagatcagccttcag
caagatgaggatgtattggacacctggttctcttctggtctctttcccttgtccatcctt
ggttggcccaatcagtcagaagaccttaatgtgttctaccctgggaccctgctggagacg
ggccatgacatcctcttcttctgggtggcccggatggtcatgctcggcctgaaactcaca
ggcagactgcccttcagagaggtctatctccacgcaatcgtacgtgatgctcatggcagg
aagatgagcaagtctctcggcaatgtcatcgaccccctggatgtcatccatggagtttct
ttgcagggcctccatgaccaactgttgaacagcaacctggaccccactgaggtggagaaa
gccaaagaaggacagaaagccgacttcccagcagggattcccgagtgcggtacagatgcc
ctgcgctttggactctgtgcctacacatcccaaggtcgagacatcaacctggatgtaaat
aggatcctggggtaccgccacttctgcaacaaactctggaatgccacaaagtttgccctg
cgtggccttgggaagagtttcgtgcccttgcccacctctaagcctgaagggcatgagagt
ctggtggaccgctggatccgcagccgactcactgaggccgtgaggctcagcaatgaaggc
ttccaggcctacgattttccggccatcaccaccgcccagtacagcttttggctctatgag
ctctgtgacgtctacttggaatgcctaaaacccgtgctgaatggagtggatgaggcggca
gcggaatgtgcccggcagaccctctacacctgcctggacgtcggcctgcggctgctctca
cccttcatgcccttcgtcacagaggagctgttccagaggctgccccgacggacaccagca
gctcccgctagcctgtgtgtcaccccctacccagagccctcagagtgctcctggaaggac
cccgaggctgaagctgctcttgagctggcgctgggcatcacccgagctgtgcgctccctg
cgtgccgactacaacctgacccggaccaggcctgactgtttcttggaagtagctgacgag
gccacaggcgccttggcatcggcagtgtcgggctatgtgcaggcgctggccagtgcaggt
gtggttgctgtcctggccctgggggctcctgcaccacagggctgtgctgtggctgtggcg
tcagaccgctgctccatccacctgcagctgcaggggctagtggacccagcccgggagctg
ggcaagctgcaggccaagagaagtgaggcccagcgccaggctcagcggctgcaggagcgc
cgtgctgcctctggctactcagccaaggtgccccttgaggtccaggaggcagacgaggcg
aagttgcaacagacagaggcggagctcaggaaggtggatgaggccattgctctgttccag
aagatgctgtga
DBGET
integrated database retrieval system
