Arvicola amphibius (Eurasian water vole): 119822563
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Entry
119822563 CDS
T08327
Symbol
Taf2
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119822563 (Taf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
aamp01002
]
119822563 (Taf2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aamp03021
]
119822563 (Taf2)
03036 Chromosome and associated proteins [BR:
aamp03036
]
119822563 (Taf2)
Peptidases and inhibitors [BR:
aamp01002
]
Metallo peptidases
Family M1
119822563 (Taf2)
Transcription machinery [BR:
aamp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119822563 (Taf2)
Coactivators
SAGA/TFTC/STAGA complex
119822563 (Taf2)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
119822563 (Taf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1_N
Peptidase_M1
HEAT_2
SR-25
RNA_polI_A34
Motif
Other DBs
NCBI-GeneID:
119822563
NCBI-ProteinID:
XP_038197921
LinkDB
All DBs
Position
9:complement(16728468..16784192)
Genome browser
AA seq
1199 aa
AA seq
DB search
MPPTGIETSKMNRKKGDKGFESPRPYKLTHQVVCINNINFQRKSVVGFVELTIFPTVANL
NRIKLNSKQCRIYRVRINDLEAAFIYNDPTLEVCHSESKQRNLNYFSNAYAAAVSAVDPD
AGNGELCIKVPSELWKHVDELKVLKIHINFSLDQPKGGLHFVVPSVEGSMAERGAHVFSC
GYQNSTRFWFPCVDSYSELCTWKLEFTVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLTI
PTAASNISLAIGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYP
YSCFKTVFIDEAYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRCLAQSLAQQFFGCFIS
RMSWSDEWVLKGISGYIYGLWMKKTFGVNEYRHWIKEELDKIVAYELKTGGVLLHPIFGG
GKEKDNPASHLHFSIKHPHTLSWEYYTMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLA
STASSQKFQSHMWSQMLVSTYGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRK
RNVLELEIKQDYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNK
KKKIPLMNGEEVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYELRYERDVV
AQQESILALEKFPTPASRLALTDILEQEQCFYRVRMAACFCLAKIANSMVSTWTGPPAMK
SLFTRMFCCKTCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIK
YNDNRKNKFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNME
KLLPSYRHTITVSCLRAIRVLQKNGHVPSDSSLFKSYAEYGHFVDIRIAALEAVVDYTKV
DRSYEEFSGYLIWIQTDPVPYVRHKILNMLTKNPPFTKNMESPLCNEALVDQLWKLMNSG
TAHDWRLRCVLVDLYFTLFGLSRPSCVPPCQSLGLVLNLKEKKAVLNPTIFQKLEQAPKN
LRVMPAVTHSLPGFQNPFSSSQDEEEVDMDTVHDSQAFISHHLNMLERPSTPGLSKYRPS
NSRSSFMPQHPLGCDITPPTKPQWSMELSRKGIGKEQPLEMGVHSMVATPLSVFAKESTS
SRHSEHHHHHHHEHKKKKKKHKHKHKHKHKHDSKDKDKEPFAFSSPASGRSVRSPSLSD
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccaccggcatagagacttccaagatgaacaggaagaaaggagacaagggcttc
gagagcccacggccgtacaaattaacccatcaggtcgtctgtatcaataacataaacttc
cagagaaaatctgttgtgggattcgtggagttgactatatttcctacagttgcaaacttg
aatagaatcaaattgaacagtaaacagtgtagaatataccgagtcaggatcaatgacttg
gaggctgcttttatttataatgatccaaccttagaagtttgtcacagtgaatcaaaacag
agaaatctcaactatttttccaatgcatatgcagctgcggttagtgctgtggatcctgat
gcggggaatggagagctctgcattaaggttccctcagagctctggaagcatgtcgatgag
ttaaaggttctgaagatacatattaacttctctttggatcagccaaaaggaggtcttcat
tttgtggtacccagtgtagagggcagtatggcagagagaggtgctcatgtcttctcttgt
gggtatcaaaattctacaagattttggttcccatgtgttgattcatactctgagctgtgc
acatggaagttagaatttacagtagatgctgcaatggtcgccgtgtccaatggggatttg
gtggagacggtgtatacccatgatatgaggaagaagaccttccactatatgcttaccatt
ccgacagcagcatccaatatctccttggccattgggccttttgaaatcctcgtagatcca
tacatgcatgaggttacgcatttttgtttaccccaacttcttccattgcttaaacatacc
acatcgtacctccatgaagtttttgaattttatgaagaaattttgacttgtcgctatccg
tactcctgttttaagactgtcttcattgatgaggcttacgttgaagtggccgcttacgcg
tctatgagtatttttagcacaaaccttctgcacagtgccatgattatcgacgagacaccg
ctgaccagacggtgcttagcgcagtccttggcgcagcagttcttcgggtgcttcatatcc
aggatgtcctggtctgatgaatgggtcctgaaaggaatttcaggctatatttatggactc
tggatgaagaaaacttttggtgttaacgaatatcgccattggattaaagaggagctggat
aaaatagtggcatatgaactgaaaactggaggagttttactacatcccatatttggtggt
gggaaagaaaaggataacccagcttctcaccttcacttttcaataaagcatccgcatacc
ctgtcctgggaatactacactatgtttcagtgcaaagcccacctcgtgatgagactgatt
gaaaacagaatcagcatggagtttatgctccaagttttcaataaactactaagtctggct
agcactgcttcgtctcagaagttccagtcacacatgtggagccagatgctggtttccacc
tatggatttttgaaatcgatttccaatgtctctggcaaagacatccagcccttaataaag
cagtgggtagaccagagtggagtagtaaaattttacggaagttttgcatttaatagaaag
cgaaacgttttggaactagaaataaaacaagattacacatctcctggaactcagaagtac
gtgggaccacttaaagtgacagtgcaagagttagatggatccttcaaccataccttgcaa
attgaagaaaacagtctcaagcatgatataccctgccactctaaaagcagaaggaataag
aagaaaaaaatcccactgatgaatggcgaagaagttgacatggacctttctgcaatggac
gctgattcccctttgctgtggataagaatagacccagatatgtccgtcctgaggaaggtg
gagtttgagcaggctgattttatgtggcagtatgagctccgctatgagagagacgtcgtg
gctcagcaggaatccatcctggctctggaaaagttccccaccccggcatcgcgcctggcg
ctcaccgacatcctagagcaagagcagtgcttctaccgagtccgcatggcagcctgcttc
tgtcttgcgaagattgcaaactcaatggtgagcacatggacgggaccaccagccatgaag
tctctctttactcgaatgttttgttgtaaaacttgtccaaacatcgtgaaaacaaacaac
ttcatgagttttcagagttattttctacagaagactatgccagttgccatggctttgtta
agagatgtgcataatctttgtcccaaagaagttttaacgtttattttagacttaatcaag
tacaatgacaacaggaaaaataagttttcagataactattatcgtgcagaaatgattgat
gctctggctaattctgttacacctgctgtcagtgtgaacaatgaagttagaactttggat
aacttaaatcctgatgttcggctaattcttgaggaaataacccggtttctgaatatggag
aaacttctcccaagttacagacacactatcaccgtcagctgtttgagagccataagggtg
cttcagaagaatgggcacgtgccaagtgattcatctcttttcaaatcctatgctgagtat
ggccattttgtggacatcaggatagcagctttggaagctgttgttgattacactaaagtg
gaccggagttatgaagaattcagtggctacttaatatggattcagactgatcctgtacct
tatgtaaggcataagattctaaacatgttgactaagaatccaccatttacaaagaacatg
gagtctcccttatgtaatgaagccctggtagaccagctctggaaattaatgaattctggt
actgcccatgactggaggttacggtgtgtgcttgtggatttgtacttcactttgtttggc
ctcagtagaccttcctgtgtacccccttgccagagcttggggcttgttcttaatctcaag
gagaaaaaagctgtcttgaatcctaccatattccagaaactggagcaggcacccaagaat
ctgcgagtcatgccggctgtcacgcacagcttgcctggatttcagaaccctttttcaagt
tctcaggatgaggaggaggttgatatggatactgtccacgatagtcaggccttcatttcc
catcatctgaacatgcttgaaaggccatctactccagggctttctaaatatcgaccatcg
aactccagatcttccttcatgccccagcatccattaggctgtgacatcacaccacccaca
aaaccccagtggagtatggaactatcccgaaagggaataggtaaagagcagcctttggag
atgggtgtgcattccatggtagcaactccactctcagtgtttgctaaggagtctacgtcc
tctagacacagcgagcaccatcatcatcatcaccacgagcacaagaagaagaagaagaag
cacaagcacaagcataagcataaacacaagcatgacagcaaggacaaggacaaggagccc
tttgccttctccagccctgccagtggcaggtctgtgcgctcgccttccctctctgactga
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