Arvicola amphibius (Eurasian water vole): 119822622
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Entry
119822622 CDS
T08327
Symbol
Pcgf6
Name
(RefSeq) polycomb group RING finger protein 6 isoform X1
KO
K11470
polycomb group RING finger protein 6
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03083
Polycomb repressive complex
aamp04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119822622 (Pcgf6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
119822622 (Pcgf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119822622 (Pcgf6)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
119822622 (Pcgf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
RAWUL
zf-RING_2
zf-RING_UBOX
zf-RING_6
zf-C3HC4_3
zf-RING_5
zf-RING_10
PBP1_TM
zf-C3HC4_4
TRAF3_RING
RING_XB3-XBAT31
zf-C3HC4_5
Motif
Other DBs
NCBI-GeneID:
119822622
NCBI-ProteinID:
XP_038197990
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All DBs
Position
1:complement(186798845..186818745)
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AA seq
358 aa
AA seq
DB search
MEEAETDATENCRASESKRASAMPPPPPPISPPALTPAPAAGEEGPASLPEAGAPGCSRS
LPPELEPERSLGRLRGRFEDYDEELEEDEEMEEEEEEEEDMSHFSLRLESGRPDSEDEEE
RLLNLAELTPYIMCSICKGYLIDATTITECLHTFCKSCIVRHFYYGNRCPKCNIVVHQTQ
PLYNIRLDRQLQDIVYKLVINLEEREKKQMHDFYKERGLEVPKPASLFLSQLAVPQPVPS
NKGKTKKVLESVFRIPPELDMSLLLEFIGANEDTGHFKPLEKKFVRVSGEATIGHVEKFL
RRKMGLDPACQVDIICGDHLLERYQTLREIRRAIGDAAMQDGLLVLHYGLVVSPLKIT
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggctgagacggacgccacggaaaactgtcgcgcctccgagtccaagcgagcc
tctgccatgccgccgccgccgcctcccatctctccgcccgccctcaccccggcgcccgcg
gccggtgaggagggcccggcgtccctgcccgaggcgggcgctcccggctgctcccgctct
cttcccccggagctggagcccgagcgcagcctgggccgtttgaggggccgcttcgaggac
tacgacgaggagttggaggaggatgaggagatggaggaggaagaggaagaggaggaagac
atgagccacttctcgctgcggctggagtcggggcggccggactccgaggacgaggaggag
cgcctgctgaaccttgctgaactgaccccatacatcatgtgttccatttgcaaggggtac
ttaatagacgcaactaccattacagagtgtcttcataccttttgtaaaagctgcattgta
agacatttttactacggcaacagatgcccaaaatgcaacatagttgtccaccagactcag
cctctttataatataagattggaccgacagttacaagacatagtgtacaaattagtgatc
aatctagaggaaagagaaaaaaagcaaatgcatgatttctataaagaaagaggtctagaa
gtacccaaacctgcttctttgtttctgtctcaattagctgttccacagccagtcccttca
aacaaaggaaaaaccaagaaagtcctagagtcagtgtttcgtattccacctgaacttgat
atgtctttattacttgagttcattggtgctaatgaagatacaggacactttaagccatta
gaaaagaagtttgtgcgtgtttcaggagaagcaactattgggcatgtagagaaatttctt
agaagaaaaatgggtcttgatccagcttgtcaggtagatatcatctgcggtgatcactta
ttggaacgctaccaaactctacgggaaatccggcgtgcaataggtgatgcagcaatgcag
gatggtctccttgttcttcattatggtcttgtggtttctcctttgaaaataacatga
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