Arvicola amphibius (Eurasian water vole): 119822658
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Entry
119822658 CDS
T08327
Symbol
Trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aamp03016
]
119822658 (Trub1)
Enzymes [BR:
aamp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
119822658 (Trub1)
Transfer RNA biogenesis [BR:
aamp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
119822658 (Trub1)
Prokaryotic type
119822658 (Trub1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
119822658
NCBI-ProteinID:
XP_038198057
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All DBs
Position
1:196804198..196844609
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AA seq
331 aa
AA seq
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MAAAEAEVVSPPIADAAPDAAETAAVVAARTGSPAQVSKAALAAKLLSLSGVFAVHKPKG
PTSAELLNRLKEKLLAEAGMPSPEWHKRQKQTLKIGHGGTLDSAAQGVLVVGIGRGTKML
TSMLSGSKRYIAVGELGKATDTLDSTGKVTDEKPYDKITQEDIEGVLQKFTGNIMQAPPL
YSALKKDGQRLSTLMKRGEVVEARPARPVTVYSISLLRFQPPLFTLDVECGGGFYIRSLV
NDIGKELSSCANVLELTRTKQGPFTLEEHALPEDRWTIDDITQALQHCTSLLPEESAFKK
PKSEKSGDQVLSYEYITLSETKREEDAIKTL
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgctgaggcagaggtggtgtcccctccgattgccgacgcagcccccgatgct
gcagaaacggccgcagtggtagcggcccggaccggatcgccagcccaggtctccaaggcc
gccctggctgctaagctgctgtcgctcagcggcgtgttcgccgtgcacaagcccaaaggg
cccacttcagccgagctgctgaatcggctgaaggagaagctgctggcagaagctggaatg
ccttccccagaatggcacaagaggcaaaagcagacattgaaaattggacacggagggacg
ttggacagtgctgcacaaggagtcctggtggttgggattggaagaggaacaaaaatgttg
accagcatgctgtcggggtccaagaggtatattgccgttggagaactggggaaagctacc
gacacgctggattctactgggaaggtaacggacgagaagccatatgataaaataacacaa
gaagatattgaaggcgttctgcagaagttcactgggaatataatgcaagcccccccactc
tattctgcgctgaagaaggatggccaaaggctttcgacgttaatgaagagaggtgaagtg
gttgaggccagacctgccagaccggtgactgtctacagcatctccctcctgaggttccag
ccaccgctcttcaccttagatgttgagtgcggaggaggcttttacatcagaagcttggtc
aatgacattggcaaagagctctcttcctgtgccaacgtgctggagctgacccgcaccaaa
caggggccatttacccttgaagagcacgcccttcctgaagataggtggaccatcgatgac
atcacacaggcccttcagcactgcacatcccttctgccagaagagtcggcgtttaaaaaa
ccaaaatctgagaaatctggtgaccaggttttaagctatgaatatataactctaagtgag
acaaagagagaagaggatgcaattaagacactctga
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