Arvicola amphibius (Eurasian water vole): 119822749
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Entry
119822749 CDS
T08327
Symbol
Rxrb
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X3
KO
K08525
retinoid X receptor beta
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03320
PPAR signaling pathway
aamp04659
Th17 cell differentiation
aamp04919
Thyroid hormone signaling pathway
aamp04920
Adipocytokine signaling pathway
aamp04928
Parathyroid hormone synthesis, secretion and action
aamp05200
Pathways in cancer
aamp05202
Transcriptional misregulation in cancer
aamp05207
Chemical carcinogenesis - receptor activation
aamp05216
Thyroid cancer
aamp05222
Small cell lung cancer
aamp05223
Non-small cell lung cancer
aamp05226
Gastric cancer
aamp05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
119822749 (Rxrb)
09152 Endocrine system
04920 Adipocytokine signaling pathway
119822749 (Rxrb)
03320 PPAR signaling pathway
119822749 (Rxrb)
04919 Thyroid hormone signaling pathway
119822749 (Rxrb)
04928 Parathyroid hormone synthesis, secretion and action
119822749 (Rxrb)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
119822749 (Rxrb)
05202 Transcriptional misregulation in cancer
119822749 (Rxrb)
05207 Chemical carcinogenesis - receptor activation
119822749 (Rxrb)
09162 Cancer: specific types
05226 Gastric cancer
119822749 (Rxrb)
05216 Thyroid cancer
119822749 (Rxrb)
05222 Small cell lung cancer
119822749 (Rxrb)
05223 Non-small cell lung cancer
119822749 (Rxrb)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
119822749 (Rxrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aamp03000
]
119822749 (Rxrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
aamp03310
]
119822749 (Rxrb)
Transcription factors [BR:
aamp03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
119822749 (Rxrb)
Nuclear receptors [BR:
aamp03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
119822749 (Rxrb)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
119822749
NCBI-ProteinID:
XP_038198168
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All DBs
Position
9:123155010..123161113
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AA seq
520 aa
AA seq
DB search
MSWAARPPFLPPRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAGEQQTPEPEPGD
AGRDGMGDSGRDSRSPDSSSPNPLSQGIPPSSPPGPPLTPSAPPPPMPPPPLGSPFPVIS
SSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPPVLGVRGLHCPPPPGG
PGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRC
QYCRYQKCLATGMKREAVQEERQRGKDKDGDGDGAGGAPEEMPVDRILEAELAVEQKSDQ
GVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQVILLRAGWN
ELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRSLSRVLTELVSKMRDMRM
DKTELGCLRAIILFNPDAKGLSNPGEVEVLREKVYASLETYCKQKYPEQQGRFAKLLLRL
PALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcggctcgtccgcccttcctcccgccgcgacatgccgcggggcagtgtggg
ccggtgggggtgaggaaagagatgcattgtggggtcgcgtcccggtggcggcggaggcgg
ccctggctggatcccgcggcggccggagagcagcagaccccggagccggagccgggggac
gctggccgggacgggatgggcgacagcgggcgggattcccgaagcccagacagctcctcc
ccaaatcccctttcccaggggatccccccctcttctcctcctggcccacctcttacccct
tcggcacctccacctccaatgccaccccctccactgggctcccccttcccagtcatcagc
tcttccatggggtcccctggtctgccccctccggctcccccaggattctccgggcctgtc
agcagtcctcagataaactccacagtgtcgctccctgggggcgggtccggcccccctgaa
gatgtgaagccaccggtcttaggggtccggggcctgcactgtccaccccctccaggtggc
cctggggctggcaaacggctgtgtgcaatctgcggggatcgaagctcaggcaagcactat
ggtgtttacagctgcgagggctgcaagggcttcttcaaacgcaccatccggaaggacctg
acctactcctgccgcgataacaaagactgcacggtggacaagcgccagcgcaaccgttgt
cagtactgccgctatcagaagtgcctggccactggcatgaaaagggaggcggtacaggaa
gagcggcaacgggggaaagacaaggacggggacggggacggggctgggggagcccctgag
gagatgcctgtggacaggatcctggaggcagagcttgctgtggagcagaagagtgaccaa
ggcgttgagggtcccggggggaccgggggtagcggcagcagcccgaatgacccagtgact
aacatctgccaggcagctgacaagcaactgttcacacttgtcgagtgggcgaagaggatc
ccacacttctcctccctacctctggatgaccaggtcatattgctacgggcaggctggaat
gagcttctcattgcctccttctcccaccggtccattgatgtccgagatggcatccttctg
gccacgggtcttcacgtgcacagaaactcagcccattccgcaggcgtgggagccatcttt
gatcggtccctctccagggtgctgacagagctagtgtccaaaatgcgcgacatgaggatg
gacaagacggagctcggctgcctgcgggcgatcattctgtttaatccagatgccaagggc
ctctccaatcctggtgaggtggaggtcctgcgggagaaggtctatgcatcactggagacc
tactgcaagcagaagtaccccgagcagcaaggccggttcgccaagctgctgctacgtctt
cctgccctccgctccatcggcctcaagtgtctggagcacctcttcttcttcaagctcatt
ggcgacacccccattgacaccttccttatggagatgcttgaggctccccaccagctagcc
tga
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