Arvicola amphibius (Eurasian water vole): 119822762
Help
Entry
119822762 CDS
T08327
Name
(RefSeq) germinal-center associated nuclear protein isoform X1
KO
K24317
germinal-center associated nuclear protein [EC:
2.3.1.48
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aamp03019
]
119822762
03036 Chromosome and associated proteins [BR:
aamp03036
]
119822762
Enzymes [BR:
aamp01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
119822762
Messenger RNA biogenesis [BR:
aamp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
119822762
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
119822762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM3AP_GANP
NupH_GANP
SAC3_GANP
CID_GANP
RRM_1
DUF5726
CNOT11
Motif
Other DBs
NCBI-GeneID:
119822762
NCBI-ProteinID:
XP_038198197
LinkDB
All DBs
Position
9:116197889..116250870
Genome browser
AA seq
1977 aa
AA seq
DB search
MNPGNPFIGKQPSAFAVSSSTTGTFQTKSPFRFGQPSLFGQNPTLSKNLGFSQVPSFAAP
SGISHSSSLPTFGLPQTSSAGLFTSLESTPSFPATSGPSSSSASGNTGFSFKSPSSVGVF
PSGSTFGPETGEVASSGFRKTDFKFKPLENAVFRPILGAEAEPEKTQSQAASGFFKFSQP
VSSASGGLTPFSFPQATSSSVTSSNFVFSKPANSNTSALIPPLSNQSVEEEKRGPKSVFG
SSNTGFTTFPMSSGSLGEHFPGNKTGIHQGCEEAISLVEPLPTPMKGLKRKEDQDRSPRR
HCHETAEDSDPLSRGDHPPDKRPVRLNRPRGGTLFGRTIQDVFKSNKEVGRLGSKESKKE
TGFVESGESDHMTIPGGNQSALVPPRLPAVSKEEEAEGRDEKEDSLRGASGRPSKRSEST
DSLGGLSSLESTAIQCKNIPDYLNNRTILENHFGKIAKVQRIFTRRSKKLAVVHFFDHAS
AALARKKGKSLHKDMSIFWHKKKISPSKKTFSTKEKKLGDGETSQGIEDAPFQHSPLGKP
IVRPAAGSLLNKSSPVKKPSLLKIHQFEIDPFDSGSEGSEGLGSCVSSLSILIGTVAETS
EEKYRLLDQRDRIMRQARVKRTDLDKARAFVGTCPDMCPEKERYLRETRSQLSVFEVVPG
TDQVDHAAAVKEYSRSSADQEEPLPHELRPSAVLSRTMDYLVTQIMDQKEGSLRDWYDFV
WNRTRGIRKDITQQHLCDPLTVSLIEKCTRFHIHCAHFMCEEPMSSFDAKINNENMTKCL
QSLKEMYQDLRNKGVFCTSEAEFQGYNVLLNLNKGDILREVQQFHPDVRNSPEVNFAVQA
FAALNSNNFVRFFKLVQNASYLNACLLHCYFSQIRKDALRALNVAYTVSTQRSTVFPLDG
VVRMLLFRDCEEATDFLNCHGLTVADGCVELNRSAFMEPEGLSKARKSVFIARKLTVSVG
EVVNGGPLPPVPRHTPVCSFNSQNKYVGESLATELPISAQRSGADAAGGGRGEEHEAEVD
VPPLALLPQPPLAPSSTPVIHVAPLAPAVAPGLFQSSMQPELLPPKPAPVYSDSDLVQVV
DELIQETLQVDCEEVSTAGAAYVAAALGVSDAAVEDLITAETAGILRRVAAEEVSMERQR
REEEKRQAEEERLKQERELVLTQLSEGLAAELTELMVTECVRETCSQELKSAVETDQKVR
MARCCEAVSEHLVDLFLAEEIFQTAKETLQELQCFCKYLQRWREAVAARKKLRRQMRAFP
AAPCCVDMNDRLQALVPSAECPIAEENLARGLLDLGHAGKVGISCTRLRRLRNKTAHQMK
VQHFHQQLLSNAAWAPLDLPSFVAEHLPVKREHMFWKLVLVLPDGEEQTPESPGRILENW
LKVKFTGDDSLVDDIRDGGGDIQTLTVFNALSSKGDQTVSVNVCIKVAHGTLSDSALDAV
ETRKDLLGASGLMLLLPPKVKSEDVAEEDLYWLAALLQLKQLLQAKPFQPALPLVVLVPS
SKGDSMEKEVEDGLMLQDLVSAKLISDYIVVEIPDSVNDLQGTVKVSGAVQWLVSRCPQD
LDLCCQTLIQYVEDGISREFSGRFFHDRRERRLGGLTSQEPSTIIELFNSVLQFLASVVS
SEQLCDISWPVTEFAEVGGSQLLPHLHWNSAEHLAWLKQAVLGFQLPQMDLPPAGAPWLP
VCSMIIQYTSQIPSSCQTQPVLHSRVENLLCRTYQKWKSKSLSPGQESGPSVAEIPWDDI
ITLCINHKLSDWTPPRLPITAEALSEDGQICVYFFKNLLRKYDVPLSWEQARMQTQRELQ
LSQRRLGMKAFHPSASSFSTPLLHVHRKGKKNEESGREENLSTDNLMRGASVEELLAQCL
SSSLLEEKEENKRFEEQLQQWVSQDSQAFAESACLPLYLPQTLISFPDTIKTQTVLKTSP
TRRPQNTGAGEQLQFSEISDMSLTGRLKHLERLIRSSREEDVASELHLSALLDMVDI
NT seq
5934 nt
NT seq
+upstream
nt +downstream
nt
atgaacccggggaaccccttcattgggaagcagcccagtgcttttgcagtatcttctagt
accacaggaacattccagacgaagtcaccatttcgatttggccagccttccctttttgga
caaaaccccacgctgagcaagaaccttggcttttcacaggtaccgagctttgcagcaccc
tctggaataagtcattcttcctcactgccaacgtttggacttccccaaacctctagtgct
ggactgtttactagtcttgaatccacaccttcttttccagctacctctgggccttcaagt
tcatctgcgtcgggaaatacaggatttagttttaaatcaccctctagtgttggggttttc
ccaagcggttctacttttgggccagagactggagaagtagcaagctctggttttaggaaa
acggatttcaagtttaaacctctggaaaatgcagtattcagaccaatcctgggggcggag
gcagagccagagaaaacccagagtcaagctgcgtctggctttttcaagttttcccagcct
gttagtagtgcctctgggggcctgacccctttttcttttcctcaggcgacaagtagttca
gtgactagttcaaattttgtcttttcaaagccagctaatagtaatacatctgcccttatc
cctcctttgtccaaccagagtgtggaggaagagaagaggggacctaaatcagtatttgga
agttcgaatactggtttcaccactttccccatgtcatctggatctttgggggagcacttc
ccaggcaacaaaacaggtatccatcaaggatgtgaggaagccatttctctggtagagccg
cttcctactcccatgaaaggactaaaaaggaaagaggaccaggatcgctccccaaggaga
cactgccatgagacagcagaagattcggaccccctgtcccggggcgaccatcctccagat
aaacgacctgtccgcctaaatagaccccggggaggcactttgtttggtcggacgatacag
gatgtcttcaaaagcaataaagaagtaggtcgcctgggcagcaaggaatctaaaaaggaa
acgggctttgtggaatctggggaaagtgaccacatgaccatcccaggaggaaatcagtct
gccctggtacctccccggcttcctgctgtgagtaaagaggaagaagcagaaggtagagat
gaaaaagaagattccctcaggggagcatctgggcgcccgagcaaaaggagtgagagcaca
gacagtctcgggggcttgtcttccttagagtccacagccatccagtgcaagaacatcccc
gactatctcaacaacaggaccatcttggagaaccacttcggcaaaatcgccaaagtacag
cggatcttcacccggcgcagcaaaaagctggcagtggtgcatttttttgatcatgcatct
gcagccctggctaggaagaaggggaaaagtctgcataaggatatgtctatcttttggcac
aagaagaaaataagtcccagcaaaaaaaccttttccacgaaggagaagaagcttggtgat
ggtgaaaccagtcaaggcatagaggatgccccctttcagcattcccctcttggcaagccc
atagtgaggcctgcagctggcagcctgctgaataaaagctctccagtgaagaagccaagc
cttctaaagatccaccagtttgagatagacccttttgactctggatctgagggctccgag
ggccttggttcatgcgtgtcatctcttagcatcctgataggaactgtggctgagacatct
gaggagaagtaccgccttctggaccagagagaccgaataatgcggcaagctcgggtgaag
aggactgatctggacaaagcaagggcatttgttgggacgtgccctgacatgtgtcctgag
aaggagcgctacttgcgggagacccggagccagctgagcgtgtttgaagtggttccaggg
actgaccaggtggaccatgcagcagctgtgaaggagtacagccggtcctctgcagatcag
gaggagcccctgccacatgagctgaggccctcagcagttctcagcaggaccatggactac
ctggtgacccagatcatggaccaaaaggaaggcagccttcgggactggtacgacttcgtg
tggaaccgcacacggggtatacggaaggatatcacgcagcagcacctctgtgaccccctg
acggtgtctctgattgagaaatgtacccgattccatatccactgtgcccacttcatgtgc
gaggagcccatgtcctccttcgatgccaagatcaacaatgagaatatgaccaagtgtcta
cagagtctgaaggagatgtaccaggacctgaggaacaaaggtgttttctgtaccagcgag
gcggagttccagggctacaatgtcctgctcaatctcaacaaaggagacattttgagagaa
gtacagcagttccaccctgatgttaggaactcccccgaggtcaactttgctgtccaggct
tttgctgcattgaacagtaataattttgtgagattcttcaaactggtccagaatgcttct
tacctgaatgcgtgcctgctacactgttactttagccagatccgtaaggacgccctccga
gcactcaatgttgcatacactgtgagcacacaacgctctactgtcttccctctggatggt
gtcgtgcgcatgctgctattcagagattgtgaagaggcaacagacttcctcaattgccat
ggcctcactgtggctgacggctgcgttgaacttaatcggtcggcattcatggaaccagag
ggattatccaaggccaggaagtcagtgtttattgcccggaagctgactgtgtcggttgga
gaagttgtgaatggagggccacttccccctgtacctcgccatacacctgtgtgcagcttt
aactcccagaataagtatgttggggagagcctggcgacagagctgcccatcagcgctcag
agatctggtgccgacgcagccggtggtgggcgaggagaggaacatgaggcagaggtggat
gtgcccccactagctctcctcccacagccgcctctcgcaccctcatccacaccagtgatt
cacgtggcaccgctggcccccgctgtggcacctggtctcttccagtcctccatgcagcct
gagctgctgcctccaaagcctgctcctgtgtactctgactcggacctggtgcaggtggtg
gacgagctcatccaggagactcttcaagtggactgtgaggaagtcagcacggctggggca
gcctatgtagccgcagctctgggtgtgtctgatgctgctgtggaggatctgatcacagcc
gaaaccgcaggcatcttgaggcgtgttgctgctgaagaagtgtccatggaaaggcagagg
agagaggaggaaaagcggcaggctgaagaggagaggttgaagcaagagagagaactggtg
ttgactcagctgagtgagggcctggctgcagagctgactgaactcatggtgacagagtgt
gtgcgggagacctgctcccaggagttaaagagtgcagtagagacagaccagaaggtccgc
atggcccgctgttgtgaagccgtctctgaacacctggtggatttgtttcttgctgaggaa
attttccagactgcaaaagagacactccaggaacttcagtgcttctgcaagtatctacaa
cggtggagggaagctgttgcggcccggaagaaactccggcgtcagatgcgggccttccct
gcagcaccatgctgtgtggacatgaatgaccgactgcaggcactagtgcccagtgcagag
tgccccattgctgaggagaacctggccaggggcctcttggacctgggccatgcagggaaa
gtaggcatctcctgtaccaggttgaggcggcttagaaacaagacagctcatcagatgaag
gttcagcacttccaccagcagctgctcagtaatgctgcatgggcacctctggacctgccg
tccttcgtggctgagcacctccctgtgaagcgtgagcacatgttttggaaactggtgctg
gtgttgcctgatggagaagagcagactccagagagtcctggcagaatactagaaaattgg
ctgaaggtcaagttcacaggcgatgacagcctggtggatgacatacgtgatggtggcggg
gatatccagacactcacagtctttaatgcgctcagtagtaaaggggatcaaacagtttct
gtcaacgtgtgcataaaggtcgcccatggcacccttagtgacagtgcccttgatgctgtg
gagacacggaaggacctgttgggagccagtgggctcatgctgctgcttcctcccaaagtg
aagagcgaggacgtggccgaggaggacctgtactggctggcggccctgctgcagctcaag
cagttacttcaggccaagcccttccagcctgcacttccgctggtggttctcgtgcccagc
tccaaaggagactccatggagaaggaagtggaggatggtctgatgttacaggatttggtt
tcagctaagctgatttcagattacattgttgttgagatccctgattctgttaatgattta
caaggcacagtgaaggtttctggagcagtccagtggctggtctcccgatgccctcaagac
ctggacctttgctgccagacccttattcagtatgttgaggatgggatcagccgtgagttc
agtggtcggtttttccacgacagaagagagaggcgcctgggtggcctgacctcccaagag
cccagcaccattattgagttgttcaatagtgtgctccagttcctggcctctgtggtgtcc
tctgagcagctgtgtgacatctcctggcctgtcacggagtttgctgaggtggggggcagc
cagctgcttcctcatctgcactggaactcagcagagcatctagcttggctgaagcaagct
gtgcttggcttccaacttccacagatggatctcccacctgcaggagcgccctggctccct
gtgtgttccatgatcattcagtatacctcccagattcccagctcttgccagacccagcct
gtcctccactcccgggtggagaacctgctgtgcaggacttaccagaagtggaagagcaag
agcctctctccaggccaggagtcagggccttcagttgctgagatcccgtgggatgacatc
atcaccttgtgcatcaatcacaagctgagtgactggacaccccccagacttcccatcaca
gcagaggcactgagtgaagatggccagatatgtgtatattttttcaaaaatctcttaaga
aaatatgatgttcccctttcatgggaacaagccagaatgcagacacagagggagctacag
ctgagtcaaagacgtttggggatgaaggcttttcatccttctgcaagcagtttttctact
ccactgcttcatgtgcaccgtaaagggaagaaaaacgaggagagtggccgagaggagaac
ctcagtacagacaatctgatgcgcggagcttcagtggaagagctcctggcacagtgtctg
tccagcagtctgctggaggagaaggaagagaacaaaaggtttgaagagcaactccagcag
tgggtatctcaagactcacaggcattcgcagagtcagcttgccttcctctctaccttcct
cagacactcatatctttccctgacactatcaaaactcagactgtgctgaaaacatctcca
acaaggagaccccagaatacaggggcaggagagcaattacagttctcagagatatcagac
atgtcgctaactggaaggctgaagcacctggaaaggctgattcgaagttcaagggaagaa
gacgttgcctctgagctccacctgtctgcgctactggacatggtggacatttga
DBGET
integrated database retrieval system
