Arvicola amphibius (Eurasian water vole): 119822784
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Entry
119822784 CDS
T08327
Symbol
Tgfbrap1
Name
(RefSeq) LOW QUALITY PROTEIN: transforming growth factor-beta receptor-associated protein 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119822784 (Tgfbrap1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119822784 (Tgfbrap1)
Membrane trafficking [BR:
aamp04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
119822784 (Tgfbrap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
zf-Vps39_C
Clathrin
CNH
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
119822784
NCBI-ProteinID:
XP_038198242
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Position
9:complement(98240272..98269821)
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AA seq
861 aa
AA seq
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MMNIKAFTLVSAVERELLTGDREHISIECVECCGRNLYVGTNDCFIYHFLLEGEDFGLQG
RPHSCHQQLHRHLGFKKACEXVDVRASALNRLLVLCDQLYTLVNMLNLEPVPSGARIKAA
TTFAVNENPVNGDPFCVEVCIISVKRRTVQMFRCNEDRVHDCQGGVTPEQASCCGCDGYF
LCLALTTQYIILNYSTGLPRTCFPYCSEEKPPIVKRIGRQEFLLAGPGGLGMFATVAGIS
QRAPVHWSENVIGAAVCFPYVIALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIV
ATSKGVYILVPLPLEKQIQDLLASRRVEEALVLAKGARRNIPKDKFQVMYRRVLQQAGFI
QFAQLQFLEAKELFRSSQLDVRELISLYPFLLPTSSSFTRSHPPLHEYADLNQLTQGDQE
KMAKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEADHDSLLDLLVTENFCLLTDS
AAWLEKHKKYFALGLLYHYNKQDASAVQLWVKIVNGDIQDSTRSDLYEYIVDFLTYCLDQ
ELVWTHADWLLQKSEEIGVQVFTKRPLDEKQQTGFNPDDIISCLKKYPKALVKYLEHLVI
DRRLQKEEYHTHLAILYLEEVLRQRVATGSKDVDATEAQTKLRRLLQKSDSYRVHLLKEK
IQGAGLPMESAILHGKLGEHEKALHILVHEMGDFSAAEDYCLWGSEGQDAACRQRLFHTL
LAMYLHAGPSAHALTVAAVDLLNHHAREFDATQVLQLLPDTWSVQLLCPFLTGAMRDSIH
ARRTTQVALGLARSENLIYMYDKVKLKGSAVWLSDKKLCQLCQNPFGEPVFVRYPNGGLA
HTHCAASRHTTPSSPSPGTRT
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacatcaaggccttcaccttggtctctgcagtggagcgggagctgctgacgggt
gacagagagcacatcagcattgagtgtgtggagtgctgtggcaggaatctctatgtcggc
actaatgactgcttcatctaccacttcctgttggagggagaagactttggcctacaggga
cggcctcattcatgccaccaacagctacacagacacctgggcttcaagaaagcctgtgaa
tgagttgatgtgcgggcctcagctctcaataggctgctggtgctctgtgaccaactctat
accctggttaacatgctgaacctggagccagtcccctcaggggcccgcatcaaggcggcc
acaacatttgcagtgaacgagaaccctgtgaatggggaccccttctgcgtggaagtgtgc
atcatctccgtgaagcgaaggacagtccaaatgtttcggtgtaacgaggaccgagtacat
gattgtcaaggaggtgtcactccagagcaggcctcttgctgtggctgtgatggctacttc
ttgtgcctggccctgaccacacaatacatcatcctgaactacagcacaggccttcccagg
acctgtttcccctactgcagcgaggagaagccacccatcgtcaagaggataggcagacag
gagttcctgctggctggccccggaggcctgggcatgtttgccactgtggccgggatttcc
cagcgtgcccctgtgcactggtcagagaatgtgattggggcggctgtttgcttcccctac
gtcatagcactcgatgacgaattcatcacggttcacagcatgctggatcagcagcagaaa
cagaccttgccctttaaagaaggtcacatcctgcaggactttgaaggaagagtgattgtt
gccacaagtaaaggagtttacatcttggttccattacctctggaaaaacaaatacaggat
ctgttagcaagccgaagagtggaggaggctttggttttagcaaaaggagcccggaggaac
attccaaaagacaaatttcaggtgatgtacaggagggttctgcagcaggcaggctttata
cagtttgcacagctccagttcctggaagccaaagagctcttcagaagcagccagctggat
gtccgggagctgatctctctctaccccttcctgttgcccacctcctcttccttcacccgg
tctcaccctcctcttcatgagtatgcagacctgaaccagctgacgcagggtgaccaggag
aagatggccaagtgcaagcgcttcctcatgagctacctgaatgaagttcgcagcacagag
gtagcaaacggctacaaggaagacatcgacacggccctactcaagctgtatgcagaggct
gaccatgacagcctgctggacctcttggtcactgagaacttctgcctgctgacagacagc
gctgcctggctggaaaagcacaaaaagtattttgcattaggactgctctatcattacaat
aaacaggatgcctctgcggttcagttgtgggtgaagattgtgaacggggacatccaggat
tccacacgctcagacctgtatgaatacatcgttgattttcttacctactgcttagaccaa
gagctggtgtggacccatgctgactggctgttgcagaaaagtgaggagattggagttcaa
gttttcaccaagagacctttggacgagaagcagcagactggttttaatccagatgacatt
atcagttgccttaagaaataccctaaagccctggttaaatatctggagcatcttgttatc
gacaggagactgcagaaagaagagtatcacacccacctggccatcctctacctggaggaa
gtgctgcggcagagggtggccactggcagcaaggacgtagacgccactgaggcgcagacc
aaactccgaaggctgctccagaagtctgactcctaccgcgtccacttgttgaaagagaag
atccagggtgctggcctgcccatggagagcgccatcctccacgggaagctgggcgagcac
gagaaagccctgcatatcctggtgcacgagatgggggacttctctgcagctgaggactat
tgcctctggggctccgagggtcaggacgcagcctgccgtcagcgccttttccacacactg
ctcgccatgtacctccatgcaggcccctctgcccatgcgctgactgtggccgctgtggac
ttgctgaaccatcacgccagggagtttgatgccacccaggtcctacagctgctgcctgac
acgtggtcggtgcagcttctctgcccgttcctcacaggagctatgagggacagcatccat
gccaggaggaccacacaggtggctcttggcctggccagatcagaaaacctgatttacatg
tatgataaggtgaagctgaagggaagtgcagtctggctctcagacaaaaagctctgccaa
ctctgccagaacccttttggtgagcctgtgtttgtcagatacccaaatggagggctcgcg
cacacccactgtgctgccagcagacacacgacccccagctcacccagccctggcactcgg
acttga
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