Arvicola amphibius (Eurasian water vole): 119822829
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Entry
119822829 CDS
T08327
Symbol
Tubgcp6
Name
(RefSeq) gamma-tubulin complex component 6 isoform X1
KO
K16573
gamma-tubulin complex component 6
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119822829 (Tubgcp6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aamp04812
]
119822829 (Tubgcp6)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
119822829 (Tubgcp6)
Cytoskeleton proteins [BR:
aamp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
119822829 (Tubgcp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP6_N
GCP_C_terminal
GCP_N_terminal
DUF4573
GCP5-Mod21_C
Motif
Other DBs
NCBI-GeneID:
119822829
NCBI-ProteinID:
XP_038198354
LinkDB
All DBs
Position
9:complement(47439405..47459881)
Genome browser
AA seq
1818 aa
AA seq
DB search
MASITQLFDDLCEALLPAAQAHPGQRPVDRKRAKLSLKRVAYNALFANLFQEDNHQRPPD
SAKRPVKNKVLMLSFDLRVGGLGPEADRLEELVEKLEATPGCPLVEVESVLDLLVQLAGS
GPPQVLRRKRDFFFNNKHAGRNVPYGGYDCYDLSVFEMDVRSLISGEEYLCHNMFQGALQ
VMEATPGTGLPTVGRFSVGDSCGDRFERDTRVSLFGALVHSRTYDMDVKLDLPPVPDSAD
FSGLAIKVPQIVDQWEDEGFQSASNLTPDSQSEPSMTPDLDLWEAVLTYEASKRRCWERI
GCPPGYREEPYLTEAGRDAFDRFCRLCHGELQALSGGLLQAPKPVLVEESELVKDSLNVL
LGVVSATFSLCQQTQAFVVELGVHVSGASPESISSILSEVAEYGTYYTRLSRFSLQPVVG
SLCSRGLVFQAFTSGIRRYLQYYRACVLSTPPTLSLLTIGFLFKKLGRQLRYLAELCGVG
TVSLVTSGEPRAVFPTGVKLLSYLYQEALDNCSNEHYPVLLSLLKTSCEPYTRFIHDWVY
SGVFRDVYREFMIQVNHEYLSFRDKFYWTHGYVLISKEVEDCVPVFLKHIAHDVYVCGKT
INLLKLCCPRHYLCWSDVPVPRISVIFSLEELKEIEKDCAVYVGRMESVARHSSISKEEK
ELRMEIAKQELIVHAREAASRILTELSDRQMSEQMAVDTRKREQFQRLKEQFLKDQERRL
AARQEELDDDFSYARELRDREKRLKALEEELERKARQALVDHYSKLSAEAARREQKALWR
IQRHRLESARLRFLLEDQKHIQEMLSDMEAHQPQKPPSVVPITCTQVTSPNTEHADEGRS
SDLGSTEQCWDCLSLPGASTPSTHKSAAEGADNSGAGQTEGAGPFSTGLNITDFLPMGPG
TEQPMDNIGAPFLEVALQTISSDLPPITPGPAAGPQPAQSEYDFNTVLRPTLATSSLPGP
FQDVQNSLDSEKPHLLGDMPTKLDSCVHDMQETLPCPHSLKQDTPEYGSSQPVGKLLEHM
SGSAVPIQSLASGMAPCQQLRSTSTCVSDASIKQGDYMLDMALPQPQWNIHGHVSEASIG
VGENVSDVTPRRPRWNVHGHVSDASIKVGENVSDVIPSRPRWNIHGHVSDASIRVGENVS
DVTPSRPRWNVHGHVSEANIKVGENVSDVTPSRPRWNVHGHVSEANIKVGENVSDVTPPR
PRWNVHGHVSEASIKVGENVSDVAPSRPRWNVHGHVSEASIKVGENVSDVIPSRPRWNVH
GHVSEASIRIGENVSEEALQPPLILEEPLSEAEPDLLEPHQCSPARVSQSGLCVEAQSPV
LECGPQLPKEMKPTTCSSPGSTEKGSPTKPPIVAEPGTLRNGIPEETGPGRNRDAEDLSP
WPPSSQEDTAVPSSPGPSEELSDTETEARRWSKEQAYLADLTKLYHLEQYPDSYESMSEP
PVAHLVHHMLPQAFAFPVDPQVQSAVDESAVQLSELLTLPVLMKRSLTAPLAAHVTLVNK
AAVDYFFVELHLETHFEALRHFLLMEDGEFAQSLSDLLFEKLGAGQTPGELLNPLVLNSI
LSKALQYSLHGDTPHAANLSLALKYLPEVFAPNAPDVLSCLELRYKVDWPLNIVITESCL
NKYSGIFSFLLQLKLMMWTLKDICFHLKRTALVSHTAGSVQFRQLQLFKHEMQHFVKVIQ
GYIANQILHVSWCEFRARLAVVGDLEEIQRAHAEYLHRAVFRGLLTEKAAPVMNIIHSIF
SLVLKFRSQLISQTWGPATGPRGAEHPNFPLMQQSYSTFKYYSHFLFKVVTNLVNRGYQP
HLEDFLLRINFNNYYQDS
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atggccagtatcacccagttgttcgatgacctctgcgaggctctcttaccggccgcccag
gctcacccgggtcagcgccccgtggacaggaagagggcaaagctgagcctgaagagggta
gcctacaatgctcttttcgccaatctatttcaagaggataatcatcagcggccgcctgac
tcggcgaagcgccccgtgaaaaacaaggtcctcatgctgtccttcgatttgagggtgggt
ggcttggggccagaggccgaccgtttggaggagcttgtggagaagttggaagcaacccct
ggctgtcctctggtggaggtggagtcagtgctggacctcttggtccagttggcagggagc
ggcccccctcaagtgctgcggaggaaacgggatttcttctttaacaacaagcacgcaggc
agaaacgtaccctacggcggctacgattgctatgacctgagtgtgtttgaaatggacgtc
cggtcacttatctctggagaggagtatttgtgtcataacatgttccagggagcccttcag
gtgatggaggctaccccaggcactggcctgcccaccgttgggcgcttctctgttggtgac
tcttgtggtgacaggtttgagagagacacccgggtctcactctttggtgccctcgtgcac
agccgcacatatgacatggatgtgaaactggatctgccccctgtgccggacagcgcggac
ttttctggactggccattaaggtcccacagattgtggatcagtgggaagatgaaggattc
cagtcagcttccaatttaactcctgactcccagtctgaaccaagcatgaccccagatttg
gacctgtgggaagctgtgctcacatatgaagccagcaagcggaggtgctgggagcgcatt
ggatgccctcctggttaccgagaggagccctacctcaccgaggcagggagggatgccttt
gacagattctgcaggctctgccatggggagctgcaggccctcagtgggggtctactacag
gcccccaagcctgtgctggtggaggaaagcgagctggtgaaagactcactgaatgttctg
ctgggtgttgtttctgctacattttctctgtgtcagcaaactcaagcttttgtagtggag
ctgggtgtccatgtatcaggtgcatctcctgagagcatcagcagcatcctttcagaggtg
gcggagtatggaacctactacacacgcctgagccgtttctctctacaacctgtagtaggc
tccttgtgcagcaggggccttgtgttccaggccttcaccagtggcattaggaggtacttg
cagtattaccgggcctgtgttctctccactccgcctaccctgagtctcctcaccattggc
tttctcttcaagaaactgggccggcagctcaggtacttggctgagctttgtggtgttggc
actgtatccctggtgaccagtggagagcctagggctgtgttccccaccggtgtgaagctc
ctgtcctacctctaccaggaggcactggataattgtagtaatgagcactatcctgtgctg
ctgtctctcctgaagaccagctgtgagccctacacacggttcatccatgattgggtgtac
agtggagtcttcagagatgtttatagggagttcatgatccaggttaaccatgaatacctc
agcttcagagataagttttactggacccatggctacgtgctcatttccaaagaggtggag
gactgtgttcctgtgttcctgaaacacattgcccatgatgtgtatgtctgtgggaagacc
atcaacctgctgaagctctgttgtccccggcactacctctgttggtctgatgtccctgtc
cctcgcatctcagtgattttctctcttgaggagttgaaggagattgagaaggactgtgct
gtctatgttgggcgaatggagagtgtcgcccgtcacagctctatcagcaaggaggaaaag
gaattgcgtatggaaattgcaaaacaagaattaattgtccatgcccgggaagcagcatct
aggatcctaactgagctgagtgaccgacagatgtcagagcagatggctgtggacaccagg
aagcgagagcaattccagaggctgaaggaacagtttctaaaggatcaggagcgacgcctg
gcggctagacaagaggagctagatgatgatttcagctatgctcgtgagctccgtgaccgg
gagaagaggctaaaggccctggaagaagagctggagagaaaggccaggcaggcgctggtt
gaccattatagcaagttgtctgcagaggcagctcgtcgagagcagaaggctctgtggaga
atccagaggcatcggctggaaagcgcacggcttcgttttctcctagaagaccagaagcac
attcaggagatgctgagcgacatggaggctcaccagccgcagaagccaccgagtgtggtc
ccaatcacatgcactcaggtcacatctccgaacactgagcatgcagatgaaggccgtagc
agtgatctggggtccacagaacagtgttgggattgtctaagtctacccggtgcatcaaca
ccatcaacccacaagtctgcagcagagggagctgataactctggggctggacagacagag
ggagccgggccgttctctactggtctcaacattacagactttctgcctatgggccctggg
actgaacagcctatggataacattggtgctcccttcttagaggtggcactgcagaccatc
agctcagacctaccccctataactccagggccagcagctgggccccagcctgcccagtca
gagtatgatttcaataccgtcctgaggccaactttggctacctcttctttaccaggaccc
ttccaggatgtccaaaatagtttggacagtgaaaagccgcatctactgggggacatgccc
acaaaacttgattcatgtgtccatgacatgcaggagactttgccttgcccacattcactc
aagcaggacactcctgagtatgggagctcccagcctgtggggaagctccttgaacatatg
tcagggagtgctgtccccatacagagccttgcttctggaatggctccttgccagcaactt
aggagtacttccacatgtgtgtcagatgccagcatcaagcagggggactatatgttagac
atggctcttcctcagccacagtggaacatccatggacatgtgtcagaagccagcatcgga
gttggggagaatgtatcagatgtgactcctcgtaggccacggtggaatgtccatggacat
gtatcagatgccagcatcaaggtaggggagaatgtatcagatgtcattccttctcggcca
cgatggaacattcatggtcatgtgtcagatgccagcatcagggttggggagaatgtatca
gatgtgactccttctcggccacgttggaacgtccacggacatgtgtcagaggcaaacatt
aaggttggggagaatgtatcagatgtgactccttctcggccacgttggaacgtccacgga
catgtgtcagaggcaaacattaaggttggggagaatgtatcagatgtgactcctcctcga
ccacgttggaacgtccacggacatgtgtcagaggcaagcattaaggttggggagaatgta
tcagatgtggctccttctcgaccacgctggaacgtccacggacatgtgtcagaggcaagc
attaaggttggggagaatgtatcagatgtgattccttctcgaccacgttggaatgtccat
ggtcatgtgtcagaggcaagcatcaggattggggagaatgtgtcagaagaggctcttcag
cctcccttgattctggaggagcccttgtcagaagctgagcctgacctacttgagccccat
cagtgctctcctgcccgtgtgtcccagtcaggcctttgtgtggaagcacagagccctgtt
ctggaatgtgggccacaactacctaaagaaatgaagcctaccacctgttctagccctggc
agcacagaaaaaggcagcccaaccaagccccctattgtggctgagcctggcacgctaaga
aatggtatccctgaggagacaggtccagggaggaacagggatgctgaagacctctctcca
tggcctccaagctcacaggaagacacagctgtcccaagcagcccaggccctagtgaggag
ttatcggacacagagactgaggccagacgctggagcaaggagcaagcctatttggcagac
ctcacaaagctctaccacctggagcagtacccagacagctatgagtctatgtcagaacct
cctgttgctcacctggtacaccacatgcttccccaggcctttgctttccctgtggatccc
caggttcagtcagcagtagacgagagtgcagtgcagctaagtgagctgctgaccttgcct
gttcttatgaagcgctcccttacggcacctctggctgcccatgtcaccttggtgaacaaa
gctgcagttgactatttctttgtggagttgcacctggagacacattttgaagcgctgcgg
catttcctgctgatggaagatggagagtttgctcagtctcttagtgacctgctctttgag
aagctaggggctggacagacacctggggagctgctcaacccattggtccttaacagcatc
ctgagcaaggcactgcagtacagcctccatggggataccccacatgctgccaacctgtct
cttgccctcaaatacttgcctgaggtgtttgcccctaatgcccctgatgtgctgagctgc
ctggagctcaggtacaaggttgactggcccctcaacattgttatcaccgagagctgcctg
aacaagtacagtggtatcttctccttcctgttgcagttgaagctcatgatgtggacactc
aaagacatctgcttccacctcaagcgtacagccctagtgagccacacagctggctcagtg
cagttccgccagctgcagctgtttaagcatgagatgcagcatttcgtgaaggtcatccag
ggttacattgcaaaccagatcctgcatgtcagctggtgtgagttcagagcccggctagct
gtagtgggtgacttggaggagatccagcgggcccatgctgagtacctgcacagggctgtt
ttcaggggcctactgacagagaaggcagcaccagtcatgaacatcatccatagcatcttc
agcctggtgctcaagttccgaagccagctcatctctcagacctggggcccggctactggc
ccccgtggagccgagcaccccaacttcccactcatgcagcagtcctacagcaccttcaag
tactactcccacttcctcttcaaagtggtgaccaaccttgtgaaccgtggctaccagcct
caccttgaggacttcctgcttcgcatcaacttcaacaactactaccaggattcctga
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