Arvicola amphibius (Eurasian water vole): 119822883
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Entry
119822883 CDS
T08327
Symbol
Ddx50
Name
(RefSeq) ATP-dependent RNA helicase DDX50
KO
K13183
ATP-dependent RNA helicase DDX50 [EC:
5.6.2.7
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aamp03041
]
119822883 (Ddx50)
Enzymes [BR:
aamp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119822883 (Ddx50)
Spliceosome [BR:
aamp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119822883 (Ddx50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
119822883
NCBI-ProteinID:
XP_038198436
LinkDB
All DBs
Position
9:complement(104517946..104546369)
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AA seq
738 aa
AA seq
DB search
MPGKLLWGDIMELEAPLEESESQKKERQKSDRRKSRHHYESDEKTETRENGVTDDLDADA
PKPKKAKIREKLNGDTEEGLSRLSNEFSPSHKSRRKDVPNGDADVYEKRSKRVSSFENST
HKSSDKVEETLTREQKEGAFSNFSISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIA
QARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLS
VACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLG
FAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAA
TTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLH
GDIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRT
GRAGRTGICVCFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSY
AAVDFFRPSAQRLIEEKGAVDALAAALAHISGASSFEPRSLITSDKGFVTMTLESPEEIQ
DVSCAWKELNRKLSSTAVSQVTRMCLLKGNMGVCFDVPTNESERLQAEWHDSDWILSVPA
KLPEIEEYYDGNTSSNPRQRGGWSGGRSGRSGRSGGRSGGRSGRQSRQGSRSGSRQDGRR
RNGNRNRSRSGGHKRSFD
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgcccgggaaactcctctggggggacatcatggagctcgaggcacccttggaagagtcc
gagagccagaagaaggagaggcaaaagagtgatagaaggaagtcaaggcaccattatgaa
tcagatgagaaaacagaaacaagagaaaatggtgttacagatgacctggatgctgatgct
cccaagcccaaaaaagctaaaataagagagaagctaaatggagacaccgaagaaggactt
agtagactttccaatgaattctccccatctcataagtcaagaagaaaagacgtaccaaat
ggagatgctgatgtgtatgagaaaaggtcaaagcgagtgtcatccttcgaaaattctact
cataaatcaagtgataaagtggaggagactctaacacgtgaacaaaaggaaggagccttc
tctaatttttccatttctgaggagactataaagcttctaaaaggtcgaggggtaacatat
ctctttcctattcaagttaaaacctttggtcctgtatatgaaggaaaagatttaattgct
caagcccggacaggaacaggaaagacattctcttttgccatacccttgattgaaaggctc
caaagaaatcaagaaacaattaaaaaaagccgctcaccaaaggtacttgttttggctcca
acaagggaactggcaaatcaagtagccaaagatttcaaagatataactagaaaactcagt
gtggcgtgtttttatggtggaacatcatatcaaagccaaattaaccacattcggaatggt
attgacatccttgttgggacccctgggcgtatcaaagaccatctgcaaagtggccgtttg
gatctctcgaagctgcgccatgttgtacttgacgaagtagatcaaatgttagatttaggt
ttcgctgaacaagtagaagatattattcatgaatcctacaaaactgattcagaagacaat
cctcagaccttacttttttctgcaacttgcccacagtgggtatacaaagttgcaaaaaaa
tacatgaaatccagatatgaacaggttgaccttgttggaaaaatgactcaaaaagctgca
accactgtggaacatttggctatccagtgccattggtctcagagaccagcagttattgga
gatgtccttcaggtctatagtggatctgaagggagggctattatcttctgtgagaccaag
aagaatgtaactgaaatggccatgaatccacacataaagcagaatgcccagtgtttgcat
ggggacattgcacagtcacagagagaaattaccttgaaaggcttcagagaaggtagtttt
aaagttttggtggcaactaatgtggctgcccgcggcttggacattcctgaggttgacttg
gtgattcagagttctcctccacaggatgttgaatcctatatccatcgctctggacgcaca
ggtagagctggccggacagggatttgtgtgtgtttttatcagccaagagaaagaggacag
ctgagatatgtggaacagaaagcaggaattacttttaaacgtgtaggtgttccttctaca
atggatttagttaaatctaaaagcatggatgccatcaggtctctggcctctgtttcttat
gctgctgttgattttttccgaccatcagctcaaagactgatagaagagaaaggggcagtg
gatgcattggctgcagcattagctcacatttctggtgcatcaagttttgaaccacgatct
ttgatcacctctgacaaggggtttgtgaccatgactctggaaagcccagaagaaatacag
gatgtcagctgtgcttggaaagagcttaacagaaagctgagtagtactgctgtgtctcaa
gtcaccagaatgtgcctcctaaaaggaaatatgggtgtttgctttgatgttcctacaaat
gagtcagaaagattacaggcagaatggcatgactcagactggatactctcagtgccagcc
aaattacctgaaattgaagagtattatgatggaaacacatcttccaatcccagacagagg
ggcggctggtcaggcggcaggtcaggccgttcaggccgatctggtggtcgatctggtggc
cgatcaggtagacagagtcggcaggggagtcggtcaggaagtcggcaagatggtagaaga
cgaaatgggaacagaaatcgctcaagaagtgggggccataaacggagttttgactaa
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