Arvicola amphibius (Eurasian water vole): 119822912
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Entry
119822912 CDS
T08327
Symbol
Trerf1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X2
KO
K26583
transcriptional-regulating factor 1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119822912 (Trerf1)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
119822912 (Trerf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-met
Myb_DNA-bind_7
Zn_SUZ12
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
119822912
NCBI-ProteinID:
XP_038198495
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All DBs
Position
9:complement(70364318..70405581)
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AA seq
1113 aa
AA seq
DB search
MGDQQLYKTNHVAHSGENLFYQQPPLGVHSGLNHSYGSTISGAGMDAPQASPISPHFPQD
TRDSLGLPIGSKNLGQMDTSRQGGWGSHAGPGNHVQLRSNLANSNMMWGSPAQVEPTDGY
QYAYSQASEIRTQKLTSGVLHKLDSFTQVFANQNLRIQVNNMAQVLHTQSAVMDGASDSA
LRQLLSQKPVEPSASAIASRYQQVPQQPHPGFTGGLPKPALPVGQHAPQGHLYYDYQQPL
AQMSMQGGQPLQAPQVLSSHMQPMQQHQYYPQPPSQQQQAGLQRISMQEMQQQPQQQIRP
SQPQQQQQLQLQQRQGSLQIPQYYQPQPMMQHLQEQQQPPMHLQPPSYHRDPHQYTPEQA
HAVQLIQLGSMPQYYYQEPQQPYSHPLYQQSHLSQHQQREDSQLKTYSSDRQTPAMLSSH
GDMGPPDTGVVDPASSEMTRVSSTLPHQPLLSPSGIHLNNVGPQHQQPSPSAMWPQMHLP
DGRAQPGSPESSGQTKGAFGEQFDAKNKLTCSICLKEFKSLPALNGHMRSHGGMRASPSL
KQEIPRKQHPPITAKVEEPLKTLPEKKKFRHRPEPLFIPPPPSSYTPNPTSYSGATLYQS
QLRSPRILGDHLLLDPAHELPPYTPPPMLSPVRQGSGLFSNVLISGHGSGVHPQLPLTPL
TPTPRVLLCRSSSIDGSNVTVTPGPGEQTVDVEPRINIGLRFQAEIPELQDVSALAQDTH
KATLVWKPWPELENQALQQQVENLLNLCCSSALPGGGTNSEFALHSLFEAKGDVMAALET
LLLRKPVRLKCHPLANYHYAGSDKWTSLERKLFNKALATYSKDFIFVQKMVKSKTVAQCV
EYYYTWKKIMRLGRRHRTRLAETIDDCMTSEEEEEAEEEEEDPEEDRKSIKEEESEVAKS
PEPPPVPALAPTEGPPLQATGQPSGSFICEMPNCGAVFSSRQALNGHARIHGGTNQVTKT
RGAVPSGKQKPGGTQSGYCSVKSSPSHSTTSGETDPTTIFPCKECGKVFFKIKSRNAHMK
THRQQEEQQRQKAQKAAFAAEMAATIERTTGPVGAPELLPLDQLSLMKPVKDVDILDDDV
VQQLGVMDEAEVVGTDLLLDDQDSVLLQGDTEL
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccagcagttgtacaagaccaaccatgtggcccacagtggtgagaacctcttc
taccaacagccacctcttggtgtccacagcgggctgaaccacagctatgggagtacaatc
tctggggccggaatggatgccccgcaggcctcgcccatctctcctcacttccctcaagat
actcgggatagtttgggcttgccgattggctccaaaaaccttggccaaatggatacctcc
aggcagggaggatggggaagccatgcggggcctgggaaccacgtccagcttcgtagcaac
ttggccaactcaaacatgatgtgggggtcgccggctcaggtagagcccactgatggctac
caatacgcttactcccaggccagcgagatccggacccagaaactcaccagtggtgtttta
cacaagctggactctttcacccaggtgtttgccaaccaaaacctgcgaattcaggtcaac
aatatggcccaggtgctgcacactcagtcagcagtgatggatggagcctctgacagtgct
cttcgccagctgctctctcagaagcccgtggagccctcagcatcagctatagcgtctcgc
taccagcaggtgccccagcagcctcaccctggcttcacaggtggactgcccaaaccagcc
cttccggtcgggcagcacgctccccaagggcacctatattatgactaccagcagcccctg
gcccagatgtcaatgcaaggaggacagccactgcaagcccctcaggtgctgtccagccat
atgcaaccaatgcagcagcaccagtattacccacagccgccgtctcagcagcagcaagcc
ggtctgcagcggatctcgatgcaagaaatgcagcagcaaccgcagcagcagattcgcccc
tcacagcctcagcagcagcagcagctccaactgcagcagcggcagggttcactgcagata
cctcagtattatcagccccaacccatgatgcaacacttgcaagagcagcagcagccccca
atgcacctgcagcccccttcctatcacagggaccctcatcagtataccccggagcaggca
catgctgtccagctgatccagctgggctccatgccgcagtattactatcaggagcctcaa
cagccctatagccacccgctctatcagcagagccacctgtcccagcaccagcagcgtgaa
gacagtcagttgaagacatactctagcgacaggcagactccagctatgctgagctcccac
ggtgacatggggcccccagatacaggggtggtagacccagcaagctcagagatgacccga
gtcagcagtacccttcctcaccaaccgctcctgtcccccagtggaatccacctcaacaac
gtggggccccagcatcagcagccgtctcccagtgcgatgtggccccagatgcacctacct
gatgggagagcgcagccagggtccccggaatcaagtggccaaaccaaaggagcgtttggg
gaacaatttgatgccaagaacaagctgacttgctccatctgcctgaaggagttcaaaagc
ctgcctgccctgaacggccacatgcggtcccacgggggaatgagggcctcccccagcctc
aaacaggaaatcccccggaaacagcatccacccatcaccgccaaagttgaggagcccctc
aagaccctaccagagaagaagaagttccggcaccggcctgagccgctcttcatcccgcca
ccgccttcttcctatactcccaaccccacttcttactcgggggccaccctataccagagc
cagctgcgctccccacgcatcctcggggaccacctgctcctggaccccgcccacgagttg
cccccctacacgccgccacccatgctgagcccggtgcgccagggctcagggctcttcagc
aatgtcctcatctcgggccacggctcaggagtgcacccccagctgcccctcactcccctc
acgcccacgccacgcgtgctgctgtgccgctccagcagcatcgatggcagcaatgtgaca
gtcaccccaggacctggagagcagactgtggacgtcgaaccacgcatcaacattggcttg
agattccaagcagagatcccagaactgcaagatgtctccgccctggctcaggacacacac
aaggccacgctggtgtggaagccgtggcctgagctggaaaaccaggccctccaacaacaa
gtggagaatcttctgaatttgtgctgctccagtgcactgccgggtggagggaccaattca
gaatttgcgctgcactctctctttgaggccaaaggtgatgtgatggctgctctggaaact
ctgctgctacggaagccagtcaggttaaaatgtcatcctttagcaaattaccactatgcc
ggctctgacaagtggacctctctagaaaggaaactgtttaacaaagcgctggccacctac
agcaaggactttatctttgtgcagaagatggtgaagtccaagacagtggctcagtgcgtg
gagtactactacacctggaagaagataatgcggctggggaggagacaccggacacgccta
gcggaaaccattgatgactgcatgacaagtgaagaggaagaagaggcagaggaggaagaa
gaggacccggaagaagataggaaatccataaaagaagaggagagtgaagtggccaagtca
ccagagccaccacctgtccccgccctggctcccactgaggggccacccctgcaggccact
ggccaaccatctggctctttcatctgtgaaatgcccaactgtggggctgtgttcagctcc
cgacaggcactgaatggccatgcccgcatccacggcggcaccaaccaggtgaccaagacc
cgaggtgctgtcccctctgggaagcagaagccaggtggcactcagagtgggtactgttca
gtaaagagttcaccatcacacagcaccaccagtggagagacagaccccaccactatcttc
ccctgcaaggagtgtggcaaggtcttcttcaagatcaaaagccggaatgcacacatgaaa
acccaccggcagcaagaggagcagcagaggcagaaggctcagaaggcggctttcgcagca
gaaatggcagccaccatcgagaggactactgggccggtgggggcacctgagctgctgccc
ctggaccagctgagtctcatgaagccggtcaaggacgtggacatcctggacgatgatgtg
gtccagcagttaggggtcatggacgaggccgaggtggtgggcacggatcttctcttggat
gaccaagattcggttttgcttcagggtgacacagaactctaa
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