KEGG   Arvicola amphibius (Eurasian water vole): 119823166
Entry
119823166         CDS       T08327                                 
Symbol
Helq
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aamp03400]
    119823166 (Helq)
Enzymes [BR:aamp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     119823166 (Helq)
DNA repair and recombination proteins [BR:aamp03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    119823166 (Helq)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF4332 alpha-hel2
Other DBs
NCBI-GeneID: 119823166
NCBI-ProteinID: XP_038198920
LinkDB
Position
1:7562719..7602294
AA seq 1059 aa
MEDGGPRIRRRVSVRKRNRGSIESLCVAPAPAESQPSEDPEVEGAAGRRRRKTGSPEPAQ
ENDSEEDMFSDYDSFTENSFLAQAEDLEQKYTQLPEHGELASDSATKGLCSESMENKLPV
LAVSSSSDPETNQHIKNQSAADGPAGPEPDSDLLFDVPSSQVLYFEHLQNSSNDLGDQSA
KERDGNSHKSPNEEPVCSHQELPQPKDDLSEARASSETSRRRSIADHLKSAMAGNATAQT
PVFSRSKHLKETLLSEEISVARKAMESPSDDLGPFYSLPSKVRDLYAQLKGIKKLYDWQH
TCLTLSSVQKRKNLIYSLPTSGGKTLVAEILMLQELLCRQKDVLMILPYVAIVQEKIASL
SSFGVELGFFVEEYAGSKGKFPPTKRREKKSLYIATIEKGHSLVNALIEAGRISSLGLVV
VDELHMIGEGSRGAILEMTLAKVLYTSKTTQIIGMSATLNNVQDLQEFLKAEYYTSQFRP
VELKEYLKVNDAIYEVDSGAESGMTFSRLLNYKYSDALKKMDPDHLVALVTEVIPKYSCL
VFCPSKKNCENVAEMLCKFLSKDFLNHREKEKSAVIKNLRDMGNGKMCPVLKRTVPFGVA
YHHSGLTSDERKLLEEAYSTGVLCLLTCTSTLAAGVNLPARRVILRAPYVAREFLRRNQY
KQMIGRAGRAGIDTVGESILLLQEKDKQQVLELINGPLENCYSHLVEELTRGIQSLFLSL
ISLKIATSLGDLYQFMNGTFFGVQQKILLKEKSLWEITVESLSYLTEKGLLRRDSCGALE
EAQCCFHITKLGHASFKGAIDLAYCDILYRDLKKGLEGLVLESLLHLVYLTTPYDLAAQS
EPDWMVYFRQFSQLSPAEQNVAALLGVSESFIGKKASGQAIRKKVDKNIVNRLYLSFVLY
SLLKETNVWSVSEKFNMPRGHIQSLLTGAASFSSSVLHFCEELEEFWVYRALLVELTKKL
TYCVKAELIPLMEVTGVLEGRAKQLYGAGYKSIMHLANANPDVLVRTIEHLSRRQAKQIV
SSAKMLLHEKAETLQEEAEELLRLPADLPGLGASDTKKV
NT seq 3180 nt   +upstreamnt  +downstreamnt
atggaggacggcggtccccgcatccgccggcgggtgtctgttcgcaaaaggaaccgcggc
agcatagagagcctctgcgtcgccccggccccggccgagtcccagccctccgaggacccg
gaggtcgaaggggcggccgggaggcggcggcgcaaaaccgggagcccggagcccgcccag
gagaacgacagtgaagaggacatgtttagtgactacgacagctttacagaaaattccttt
ttagctcaagctgaggacctggaacagaaatatacacaactgcctgaacacggggagctt
gcctcagactcggccaccaaaggtctttgttcagaaagcatggaaaacaaactccctgtc
ttggctgtgagcagctctagtgaccctgaaactaaccaacacataaagaaccagagtgct
gcagatggccctgctgggcctgaacctgacagtgatcttttgtttgatgtgccttcttct
caggttttatactttgaacatttacagaactcatcaaatgatttgggtgatcagtctgct
aaggaaagagatgggaactcacataaatcaccgaatgaggagccagtctgtagccatcaa
gagctaccacagccaaaggatgacctctctgaagccagagcttcttcggagacgagcagg
aggaggagtattgcagaccacctgaaaagtgccatggctgggaatgccacagcccaaaca
ccggtgttttccaggagtaaacacctcaaagagaccctcctttctgaggagatcagtgtt
gctaggaaagcaatggagtcaccgtcagatgatcttggtcctttttattctctacccagc
aaagtgagagacctttatgctcagttgaaaggaatcaaaaaactatatgactggcaacat
acttgtctaacattaagttctgtgcaaaaaagaaaaaatttaatatattccttgccaaca
agtggtggaaaaacccttgtggctgagattttaatgctacaagaactgctctgccgacag
aaagatgttttaatgattcttccatatgtggcaattgtccaagaaaagattgccagttta
tcgagttttggtgtagaacttggtttctttgttgaagaatatgctggaagcaaaggaaaa
tttcctccgactaaaagaagggaaaagaaatctctgtatatcgccactatcgagaaaggg
catagtctggtgaatgccttgattgaagccggacggatcagctctctgggtctggtcgtc
gtcgatgagttgcacatgatcggtgaagggagccgtggcgccatactggagatgacccta
gcgaaagtgctctacactagcaagacaactcagattattggaatgagtgcaacattaaac
aatgtccaagacctgcaggagttccttaaagccgagtattacaccagtcagttcagacca
gttgagctgaaagaatacctgaaagtgaatgacgcaatctacgaggtggacagcggagct
gagagcggcatgaccttctcccgcctccttaactacaagtattctgatgccctgaaaaag
atggatcccgatcacttggtggcgttggtgacagaagttatccccaagtactcctgcctg
gttttctgccctagcaagaagaactgtgagaatgtagcagaaatgctgtgcaaatttcta
agcaaggactttctaaaccacagagagaaagagaaatccgcagtgatcaaaaacttgagg
gacatgggcaacggtaaaatgtgccctgtcttgaagcgcaccgtccctttcggagtggcc
tatcaccacagtggtctaaccagtgacgaacggaagcttctggaagaggcctactccaca
ggcgtgctctgccttctcacctgcacatccaccctggcagcaggggtcaatttgccagct
cgcagagtcatcttaagagccccctacgtggcgagagaattcttaaggaggaatcagtat
aagcagatgattggcagggccggccgtgctgggatagacacagtcggcgagagcattctt
ctactgcaagaaaaagacaagcagcaggtcctggagctgataaacggacccctggaaaac
tgctacagccatcttgttgaggagctcaccaggggaatccagagtttgtttctgtcttta
attagtttgaagattgcaacaagtcttggtgacttatatcagtttatgaacggtacattt
ttcggtgttcagcaaaagattttattgaaagaaaagagtctctgggaaataacggttgag
tcacttagctacctgacagagaaaggccttctccgaagagacagctgcggggccctggag
gaggcccagtgctgcttccacatcacaaaactgggccacgcttcttttaagggggccatt
gatttggcctattgtgacattctgtatagagacctgaagaaaggtcttgaaggacttgta
ctggaaagtcttctccatctggtctacctaacaaccccctacgaccttgctgctcagtct
gagcctgactggatggtgtacttcagacagtttagtcagctcagtccagcagagcaaaat
gtagctgctctccttggagtctcagaaagcttcatcgggaagaaggcatcaggacaagcc
atcagaaagaaggtggacaagaacattgtcaacaggctctatctgtcttttgtcctttat
tccttgctgaaagagaccaacgtttggagtgtgtctgagaaatttaatatgccccgagga
cacatacaaagcctgctcacgggagctgcctctttctcatccagcgtgttacatttctgt
gaggagctggaggagttttgggtttacagagcactgttggtagaacttaccaagaaactg
acgtactgcgtgaaggcggagctaatcccgctcatggaagttaccggggtcttagagggt
cgagcaaagcagttatacggtgcaggttacaagagtataatgcacttagccaatgccaat
ccagacgtgctagtgaggacaattgagcatctgtccaggcgccaggccaagcagattgtt
tcctcagcaaagatgctgctgcacgagaaggcagagactttgcaggaagaagctgaagag
ctgctgagattgcctgccgacctccctgggctgggggcttctgacaccaagaaggtatga

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