Arvicola amphibius (Eurasian water vole): 119823209
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Entry
119823209 CDS
T08327
Symbol
Gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03022
Basal transcription factors
aamp03420
Nucleotide excision repair
aamp05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119823209 (Gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
119823209 (Gtf2h4)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
119823209 (Gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aamp03021
]
119823209 (Gtf2h4)
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119823209 (Gtf2h4)
Transcription machinery [BR:
aamp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
119823209 (Gtf2h4)
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
119823209 (Gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
119823209
NCBI-ProteinID:
XP_038198996
LinkDB
All DBs
Position
9:complement(124611845..124617362)
Genome browser
AA seq
463 aa
AA seq
DB search
MESTPARGGLNRAHLQCRNLQEFLGGLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMRM
LFLEQPLPQAAVALWVKKEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPIFRQNLR
IALLGGGKAWSDDTSQLGPDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLL
SQAGLMKSTEPGEPPCITSAGFQFLLLDTSAQLWYFMLQYLQTAQSRGMDLVEILSFLFQ
LSFSTLGKDYSVEGMSDSLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGVSGAGG
TVHQPGFIVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASGI
TAQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFE
LLLAHARELGVLVFENSAKRLMVVTPAGHSDVKRFWKRQKHSS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggagagcacccctgcaaggggtggactgaaccgagcacacctacaatgtaggaatcta
caggagttcttagggggcctgagccctggggtgctggaccgattgtatgggcacccagcc
acttgtctggctgtcttcagggagctcccttctctggcaaagaactgggtgatgcggatg
ctttttctggagcagcctctgccgcaggctgcagtggccctgtgggtgaagaaagagttc
agcaaggctcaggaggagagtacagggctccttagtggcctccgcatttggcatacgcag
ctgctccctggtggactccagggcctcatcctcaaccccatcttccgccagaacctccga
attgcccttctgggtgggggcaaggcctggtctgatgacacaagtcagctgggaccagac
aagcacgcccgggatgtcccctcgcttgacaagtacgctgaggagcgctgggaggtggtc
ttgcacttcatggtgggctcccccagtgcagctgtcagccaggacctggcccagctcctc
agccaggctgggcttatgaaaagcactgaacctggagagccgccctgtatcacttctgct
ggcttccagttcctgctgctggacacgtctgcccagctctggtacttcatgctgcagtat
ctgcagacagcgcagagtcggggcatggacctagtggagattctctccttcctcttccag
ctcagtttctctactctgggcaaggactattccgtagagggtatgagtgattctttgttg
aacttcctgcaacacctgcgtgagtttggactagttttccagaggaagaggaagtcccgg
cgttactaccccacacgcctagccatcaacctctcatctggtgtctctggggctgggggc
acggtacatcagccgggctttattgtcgtggaaaccaattaccgactgtatgcctatacc
gagtcggagctgcagattgctctcattgccctcttctccgagatgctctatcggttcccc
aacatggtggtggcacaggtgacccgggagagcgtgcagcaggccattgccagtggcatc
acagcccagcagataatccatttcctaaggacaagggcccatccagtgatgctcaaacag
actcctgtgctgcctcccaccataacagaccagattaggctatgggagctggagagggac
agacttcgtttcactgaaggcgtcctgtataaccagttcctgtcgcaagtggactttgag
ctgctgctggcccacgcgcgggagctgggcgtgctggtgttcgagaactcggccaagagg
ctgatggtggtgacgccggccgggcacagcgacgtcaagcgcttttggaagcggcagaag
cacagctcctga
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