Arvicola amphibius (Eurasian water vole): 119823296
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Entry
119823296 CDS
T08327
Symbol
Vps52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119823296 (Vps52)
Membrane trafficking [BR:
aamp04131
]
Protein recycling
Others
EARP complex
119823296 (Vps52)
Endosome - Golgi transport
Tethering complex
GARP complex
119823296 (Vps52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Dor1
Sec3_C-term
COG6_N
DUF1664
ATG16
Motif
Other DBs
NCBI-GeneID:
119823296
NCBI-ProteinID:
XP_038199152
LinkDB
All DBs
Position
9:123103420..123112146
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AA seq
723 aa
AA seq
DB search
MAAAATMAAAARELVLRAGASDMEEEEGPLGGASGLQEPLQLGELDITSDEFILDEVDVH
IQANLEDELVKEALKTGVDLRHYSKQVELELQQIEQKSIRDYIQESENIASLHNQITACD
AVLERMEQMLGAFQSDLSSISSEIRTLQEQSGAMNIRLRNRQAVRGKLGELVDGLVVPSA
LVTAILEAPVTEPGFLEQLQELDAKAAAVREQEARGTAACADVRGVLDRLRVKAVTKIRE
FILQKIYSFRKPMTNYQIPQTALLKYRFFYQFLLGNERATAKEIRDEYVETLSKIYLSYF
RSYLGRLMKVQYEEVAEKDDLMGVEDTAKKGFFSKPSLRSRNTIFTLGTRGSVISPTELE
APILVPHTAQRGEQRYPFEALFRSQHYALLDNSCREYLFICEFFVVSGPAAHDLFHAVMG
RTLAMTLKHLESYLADCYDAIAVFLCIHIVLRFRNIAAKRDVPALDRYWEQVLALLWPRF
ELILEMNVQSVRSTDPQRLGGLDTRPHYITRRYAEFSSALVSINQTIPNERTLQLLGQLQ
VEVENFVLRVAAEFSSRKEQLVFLINNYDMMLGVLMERAADDSKEVESFQQLLNARTQEF
IEELLSPPFGGLVAFVKEAEALIERGQAERLRGEEARVTQLIRGFGGSWKASVESLSQDV
MRSFTNFRNGTSIIQGALTQLIQLYHRFHRVLAQPQLRALPARAELINIHHLMVELKKHK
PNF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcggcgaccatggcagctgctgcccgcgagctggtgttgcgggccggggcc
tcagatatggaggaggaggagggcccgctggggggtgcttctggactccaagagcccctg
cagcttggggagctggatatcacctctgatgaattcatcctggatgaagtggatgttcac
atccaggcaaatctggaggatgagttagtgaaggaagctctcaagacgggtgtggatctg
cgacactattcgaagcaggtggagctggagctgcagcagattgagcaaaaatcgatccgg
gactatatccaagagagtgaaaacatcgcgtctctgcacaatcagatcacagcctgcgac
gctgtcctggagcgcatggagcagatgctgggagctttccagagtgacctcagctccatc
agctccgagatccggaccctgcaggagcagtcaggagccatgaacatccgacttcgtaac
cgacaagcagtgcggggaaaacttggggaacttgtagatgggctagtggtgccctctgct
ctggtcacagcaattctggaagctccagtgacagagcccgggttcctggagcagctgcag
gagctggacgccaaggcagctgcggtcagagagcaggaggcgagaggcacggctgcctgc
gcagacgtcagaggcgtgctagaccggctgcgggtcaaggcagtgacaaagatccgcgag
ttcatcctccagaagatttattccttccgcaagccgatgaccaactatcagataccccag
acagccctgctgaagtacaggttcttctaccagttcctgttgggcaacgagcgagcaaca
gccaaggagatcagggatgagtacgtggagacgctgagcaagatctacctgtcttacttc
cgctcctacctggggcgcctcatgaaagtgcagtacgaggaggttgctgagaaagacgat
ctaatgggtgtggaagacacagcaaagaaaggattcttctcgaagccatccctccgaagc
aggaacaccatcttcaccctgggcacccgaggttctgtcatctcccccactgaacttgag
gcccccatcctggtgccccatactgctcagcgtggagagcagaggtatccgtttgaagct
ctcttccgcagccaacactacgccctcctcgacaattcttgccgtgaatatcttttcatc
tgtgaattttttgttgtatctggcccagctgcacatgacctattccacgctgtcatgggc
cgcacactcgccatgaccctgaaacacctggagtcctacctggccgactgctacgacgcc
attgctgtttttctctgcatccacattgttctccgattccgcaacattgcagccaagagg
gacgttcctgctctggacaggtactgggagcaggtgcttgccttgctgtggcctcggttt
gagttgatcctggagatgaatgtccagagcgtccgcagcaccgacccccagcgccttggg
gggctggacactcggccccactatatcacacgccgctatgctgagttctcctctgcactg
gtcagcatcaaccagaccatccccaatgaacgtaccttgcagctgctgggacagctacag
gtggaggtggagaattttgttctccgagtggctgcagagttctcctctaggaaggagcag
cttgtgtttctgatcaacaactacgacatgatgctgggtgtgctgatggagcgggctgct
gacgacagcaaagaggtggagagtttccagcagctgctcaatgctcggacacaggaattc
attgaggagttgctatctcctcccttcgggggtctggtggcgtttgtgaaggaggctgag
gctttgattgagcgtggacaggctgagcgccttcgaggggaagaagcccgagtcactcag
ctgatccgtggctttggtggttcctggaaggcgtcggtggagtctctgagtcaggacgtc
atgcggagtttcaccaactttcgaaatggaaccagcatcatccagggggcactgacccag
ctgatccagctctaccaccgcttccaccgggtgttggcacagccgcagctccgggctctg
ccagctagggccgagcttatcaatattcatcacctcatggtggagctcaagaaacacaag
cccaacttctga
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