Arvicola amphibius (Eurasian water vole): 119823399
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Entry
119823399 CDS
T08327
Symbol
Ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aamp03009
]
119823399 (Ddx21)
03036 Chromosome and associated proteins [BR:
aamp03036
]
119823399 (Ddx21)
Enzymes [BR:
aamp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119823399 (Ddx21)
Ribosome biogenesis [BR:
aamp03009
]
Eukaryotic type
Pre-60S particles
Helicases
119823399 (Ddx21)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
119823399 (Ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
AAA_30
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
119823399
NCBI-ProteinID:
XP_038199312
LinkDB
All DBs
Position
9:complement(104492476..104510699)
Genome browser
AA seq
772 aa
AA seq
DB search
MPGKLRSESRLGSDAAEENMEKLPKSSDKKTKKEKTKSKTEEATDRTEETVSSKAKSVKK
KGPAEDDVDPPKPKKTKKQEEAPQDNTASKSKTSKKKKEPLDKKSASAKTKEIKTEEPSE
EDTDVPKPKKMKKGKEANGDIGEKSPDLKNGLSHPESSDATGEDGSETEKEIPVEQKEGA
FSNFPISEETIKLLKARGVNYLFPVQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEK
LQSGLQERKRGRAPQVLVLAPTRELANQVSKDFSDITKKLSVACFYGGTPYGGQIERMRS
GIDILVGTPGRIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILCVAYKKDSED
NPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKAAITVEHLAIKCHWSERAAVI
GDVIRVYSGHQGRTIIFCETKREAQELSQNSCIKQDAQSLHGDIPQKQREITLKGFRNGS
FGVLVATNVAARGLDIPEVDLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQHKEEY
QLVQVEQKAGIKFKRVGVPSATEIIKASSKDAIRLLDSVPPTAISHFKQSAEKLIEEKGA
VEALAAALAHISGATSVDQRSLINSQAGFVTMILQCSIEMPNISYAWKELKEQLGEGIDA
KVRGMVFLKGKLGVCFDVRTEAVTEIQEKWHDSRRWQLSVATEQPELEGPVDGYRGGRGQ
RDGNRGAFRGQRGGSRNFRGQGQRGGNKNFRGQRPGGGNKGQKRSFSKAFGQ
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgccgggaaaactccgcagcgagtccaggttgggatcagacgcggccgaggagaacatg
gagaagctgccgaagtcaagcgacaagaaaactaaaaaagaaaagacaaaatccaagact
gaagaagcaacagacagaacagaagaaactgtttcctccaaagccaaatcagttaaaaag
aaagggcctgctgaagatgatgtggacccccctaagcccaagaagaccaaaaagcaagag
gaggcacctcaggacaacactgcttctaaaagcaagacctccaagaagaaaaaggagccc
cttgacaagaaatcggcctctgctaaaaccaaagaaataaaaactgaggaaccttctgag
gaagacacagatgttcctaagcccaagaagatgaagaaagggaaggaagcaaatggagac
attggagagaaaagccccgacctgaagaacggactctctcatcctgagtcgagtgacgct
actggcgaagatggcagtgagacagagaaggaaatacccgtggaacagaaagaaggcgct
ttttctaatttccccatatctgaagagactatcaagcttctcaaagctcgtggggtgaat
tacctgtttcctgtacaagccaagacattccaccatgtgtacagtgggaaagacttaatt
gcccaggcacggacaggaactgggaagacgttctcctttgccatccctttgattgagaag
cttcagagtgggctacaagagaggaagagaggccgtgctcctcaggtactagttctcgca
cctacaagagaattagcaaatcaagtgagcaaagacttcagtgacatcacaaaaaagcta
tcggtcgcttgcttttacggtggaactccctatggtggtcaaatcgagcgaatgcggagt
gggattgatatcctggttgggaccccgggtcgtattaaagaccacctgcagaatggaaag
ctggatctcaccaaacttaaacatgttgtcctggatgaagttgaccagatgttagatatg
ggttttgctgatcaagtagaagaaattttatgtgtggcatataagaaagattctgaagac
aacccccaaacattgcttttctctgcaacttgccctcattgggtatttaatgttgctaag
aaatacatgaaatctacatacgaacaggtggacctgattggtaaaaagactcagaaagca
gccataactgtggagcacctggcgattaagtgccactggagtgagagggcagcggtcatt
ggggatgtgatccgggtgtacagcggtcaccagggtcgcactatcatcttctgcgaaacc
aagagagaagcccaggaactgtcccagaactcgtgcataaagcaggatgcccagtcgttg
cacggcgacattccacagaagcaaagggaaatcaccctgaaaggtttccgaaatggcagt
tttggagttttggtggcgaccaatgttgctgcacgtggattagacatccctgaggttgac
ttggttgtccaaagctgcccaccaaaagatgtggagtcgtacattcaccgttcagggcgg
acaggcagagctggaaggacaggggtttgcatctgcttttatcagcacaaggaagagtac
cagttagtgcaagtggagcagaaagcgggaattaaatttaagcgggtaggtgttccttct
gcaacagaaataataaaggcctccagcaaagatgccatcaggcttttggattctgtgcct
cccaccgccatcagccacttcaagcagtcagctgaaaagctgattgaggagaagggagct
gtagaggccctggcagccgcgctggcccacatttccggggccacatcagtcgaccagcgc
tccttgatcaactcacaagcgggctttgtcaccatgatcctacagtgctcgattgagatg
cccaacattagctatgcttggaaagaacttaaggagcagctgggcgagggcattgatgcg
aaagtgagggggatggtcttcctcaaaggaaaactgggagtttgttttgatgtccgcact
gaagcagtcacagaaatacaggagaagtggcatgattcaagacgctggcagctcagtgtg
gccacggagcagccggagctggaaggacccgtggatggatatcgaggtggcaggggtcag
cgtgatggcaaccgcggtgcattcagaggacagcggggtggaagcaggaacttcaggggg
caggggcagcgaggaggaaataaaaacttcagaggacagcgacccggaggtggcaacaaa
ggccagaagcggagttttagtaaagcgtttggtcagtga
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