Arvicola amphibius (Eurasian water vole): 119823461
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Entry
119823461 CDS
T08327
Symbol
Pex6
Name
(RefSeq) peroxisome biogenesis factor 6 isoform X1
KO
K13339
peroxin-6
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
119823461 (Pex6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119823461 (Pex6)
Membrane trafficking [BR:
aamp04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
119823461 (Pex6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_33
AAA_lid_3
AAA_22
AAA_11
RuvB_N
NPHP3_N
nSTAND3
AAA_5
TsaE
TIP49
AAA_25
AAA_19
RNA_helicase
AAA_30
AAA_28
Mg_chelatase
PEX6_4th
Vps4_C
IstB_IS21
AAA_14
DUF815
SLFN-g3_helicase
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
119823461
NCBI-ProteinID:
XP_038199411
LinkDB
All DBs
Position
9:complement(70977356..70993040)
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AA seq
980 aa
AA seq
DB search
MAVAVLRVLEPFPTETPPLSVLLPPGGPWSATGLGLVLALRPASESPAGPALLVAALEAP
VPQNEQRGPGPPQLLVSRALLRLLALGPGARVRARPVRRPPALGWALLGTSPGPGLGPRV
GPLLVRRGETLPVPGSRVLETRPALQGLLGPGTRLAVTELRGRATLGPESSDHSCPPPPP
VVSSFAFSHAIRQLKGVLGGTGDALGVSRSCLRGLGLFQGEWVWVARVGEIPNPSQPHLA
KVQVLEPRWDLSERLGPSSGQLGEPLADQLVFVPPTLAFNLGCDPLEVGELRLQRYSEGS
ISPEDRGSCSLLAEPPFARELHIEIVSSPHYSANGNYDRVLYRHFRTPRVVQEGDVLCVS
TAGQVETLEGHLEKLPRWREVFFKVKKTVGEAPDGPASAFLADATHTSLYMAGSTMSRVP
LLPSGRSTPWDSLSPPGLEALVNELCAVLKPHLQPGGTLLTGASCVLLRGPPGSGKTTAV
TAACNRLGLHLLKVPCCSLCADSSGAVETKLQAAFSRARRCRPAVLLLTAVDLLGRDRDG
LDEDARVVATLRHLLLDEDPLSSCPPLMVVATTSRAQDLPTDVHTAFPHELEVPVLSEEQ
RLSVLQALTAHLPLGQEVDLPQLARRCAGFVVGDLYALLTHTSRVACARIRTSGLAGALS
EEDEGELCVAGFPLLAEDFGQALDQLQTAHSQAVGAPTIPSVSWHDVGGLQDVKKEILET
IQLPLEHPELLSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQ
SEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTG
DVFVIGATNRPDLLDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLVS
VLDCCPPQLTGADLYALCSDAMTAALKRRVRDLEEGLELGSSALLLTMEDLLQAAARLQP
SVSEQELLRYKRIQHKFAAC
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagctgtcttacgcgtcctggaacccttcccgactgagacgccaccgttgtcg
gtgctgttgccgcccgggggcccgtggtctgcgacagggctgggcctggtgcttgcgctg
cggccggcgagcgaaagtcctgcggggcccgcgctgctcgttgcggccctggaagctccg
gtcccccagaacgagcagcgcgggcccgggcctccgcagctgctggtgagccgcgcgttg
ctgcggctcctggcgctaggccccggggcgcgagtgcgagcgcggcctgtgcggcggcct
ccggcgctaggctgggcgctgctcggcacgtctcccgggcctgggcttgggcctcgggtc
ggaccgctgctggtgcgccgcggggagaccctgcccgttcccggttcgcgagtgctggag
acgcggccggccttgcaagggctgctgggcccagggacgcggctagctgtaactgagctc
cgcgggcgggccacactgggccctgagagcagtgaccacagctgtcccccacccccgcct
gtggtatcctcctttgccttttcccacgcaattcggcaacttaaaggagttttgggaggg
actggagacgcactgggtgtgagccgaagctgtctccggggtctcgggctcttccagggc
gaatgggtatgggtggcccgggtcggagagataccaaacccttcccagccgcacttggct
aaagtacaggtcctagaacctcgctgggacctgtccgagagactgggacccagctctggg
cagctgggagagccacttgctgaccaactggtgtttgtgccgcctactctggcttttaat
ctcggctgtgaccccctggaagtgggagagctcagacttcagagatactcagaaggctcc
atcagccctgaagacagaggaagctgttcactgctggctgagcctccgtttgctagagag
ttacacattgaaattgtgtcctcgcctcactacagcgctaacgggaactatgaccgcgtt
ctttaccggcactttcgcacacccagggtggtccaggaaggggatgttctgtgtgtatca
acagctgggcaagtggagactctggaaggacacctggagaaactgcccaggtggcgggag
gtgttttttaaagtgaagaaaacggttggggaagccccagatggaccagccagtgccttc
ctggcagatgccacccacacctctttatacatggcaggttccaccatgagtcgtgttccg
ctgctgccttcgggaaggtccactccctgggacagcttgtctcctccaggcctagaagcc
ttggtgaacgagctctgtgctgtcctgaagcctcacctgcagcctggaggaaccttgctc
acaggagccagctgtgtgcttcttcggggccccccaggcagcgggaagaccacagcagtc
acagctgcatgtaatcgccttgggctccatttactgaaggtgccctgctgcagcctctgt
gcagacagtagtggggctgtggagacaaaactgcaggccgccttctcccgggcccgccgc
tgcaggccagccgtcctgttgctaacagctgtggaccttctgggccgggaccgtgacggg
ctggatgaggatgcccgtgtggtggccacactgcgtcacctcctccttgatgaggaccct
ctcagcagttgccctcctctgatggtggtggccaccacaagccgtgcacaggacctgccc
actgatgtgcacacagcatttccccatgagctggaggtgccagtgctgtccgaggagcag
cggctcagtgtcctgcaggccctcactgcccaccttcccttgggccaggaggtggacctg
ccgcagctggcacggcgctgtgcgggctttgtggtaggggacctctatgcccttctgacc
cacaccagccgggtagcctgtgccaggatcagaacctcaggtttggcaggtgccctgagt
gaggaggatgagggggagctgtgtgtggctggttttcccctgctggctgaggacttcggg
caggccttagaccaactgcaaactgctcactcccaagctgtgggcgcacccacgatccct
tcggtgtcctggcacgatgtgggtgggctgcaggatgtgaagaaggagatcctggaaacc
atccagctccctctggaacaccctgagctgttaagcctgggcctgaggcgatcgggcctt
ctgctgcatgggcctccaggcacaggcaagaccctcctggccaaggcagtggccaccgag
tgcagcctcaccttcctcagtgtgaagggaccagagctcatcaacatgtatgtgggccaa
agtgaggagaatgtgcgggaagtgtttgccagggctagggccgccgctccgtgcatcatc
ttctttgatgaactagactccttagctccaagccggggacgaagtggagattctggaggt
gtgatggacagagtggtatctcagctcttggctgagctggatggacttcacagtactggg
gacgtgtttgtgattggagccaccaacagaccagacctcttggatcccgcccttctgcgg
cctggcagattcgacaagctggtgtttgtaggggcaagtgaggaccgcgcttcccagctg
cgtgttctgagtgccatcacacgcaagttcaagctggaggcctctgtgagcctggtgagt
gtgctggattgctgcccgccccagctgacaggcgcagacctctatgccctctgctctgat
gccatgacagctgccctcaaacgcagggttcgagacctagaggaagggctagagctgggg
agttcagcactgctgctcaccatggaggacctgctgcaggccgcagccaggctgcagccc
tcagtcagtgagcaggagctgctccggtacaagcgcatccagcacaagtttgcggcctgc
tag
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