Arvicola amphibius (Eurasian water vole): 119823493
Help
Entry
119823493 CDS
T08327
Symbol
Col14a1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
119823493 (Col14a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
aamp00535
]
119823493 (Col14a1)
Proteoglycans [BR:
aamp00535
]
Extracellular matrix (ECM) proteoglycans
Others
119823493 (Col14a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
VWA_3
DUF4992
Motif
Other DBs
NCBI-GeneID:
119823493
NCBI-ProteinID:
XP_038199457
LinkDB
All DBs
Position
9:17006004..17192506
Genome browser
AA seq
1797 aa
AA seq
DB search
MKIFQREMRFWLLLAFLAVAYFCTIVRSQVAPPTRLRYNVISHDSIQISWKAPRGKFGGY
KLLVAPASGGKTNQLNLQNAATKAIIQGLLPEQNYTVQLIAYNKDKESKPAQGQFRIKDL
EKRKDPTKPRVKVVDKGNGSKSTSPEEIKFFCETPAIADIVILVDGSWSIGRFNFRLVRN
FLENLVTAFNVGSEKTRIGLAQYSGDPRIEWHLNAFNTKDEVIDAVRSLPYKGGNTLTGL
ALNFIFENSFKPEAGSRSGVPKIGILITDGKSQDDIIPPSRNLRESGVELFAIGVKNADL
NELQEIASEPDSTHVYNVAEFDLMHTVVESLTRTVCSRVEEQDREIKASALATIGPPTEL
MTSEVTARSFMVNWTHTPGKVEKYRVVYYPTRGGKPEEVVVGGSVSSVVLKNLMSSTEYQ
IAVFAVSAHTASEGLRGTETTLALPMASDLELYDVTESSMRVKWDAVPGATGYLILYAPL
TEGLAGDEKEMKIGETHTDIELSGLFPNTEYTVTVYAMFGEEASDPATGQATTLPLTPPR
NLRISNIGSNSARLTWDPTSRKINGYRIVYTSADGTEINEVEVDPITTFPLKGLTPLTEY
SVAIFSIYEEGQSLPLVGDFTTEEVPAQQYLEIDEVKTDSFRVTWHPLSAEEGQHKLMWI
PVYGGKTQEVALKEEQDSYVVEGLDPGTEYEVSLLAVLDDGSESEVVTAVGTTLDDFWTQ
APTTVEPTSPVTSVLQTGIRNLVVDDETSTSLRVTWDISDSNVEQFRVTYLTAQGDPMEE
VVGTVLVPGMQNNILLKTLIPDTEYKVTVTPIYTTGEGVSVSAPGRTLPSSGPQNLRVSE
EWYNRLRITWDPPSAPVKGYRIVYKPVSVPGQTLETFVGADINTIVITNLLSGMDYNVKI
FASQAAGFSDALTGLVKTLFLGVTDLQAHQVETTSLCARWQIHRHATAYRIVLESLQDTH
AQESTLGGGVNRHCFYGLQPDSDYKISVYTKLQEIEGPSVSIMQRTQSLPTEPPTFAPTI
PPAKEVCKAAKADLVFMVDGSWSIGDDNFNKIINFLCSTVGALDKIGADGTQVAMVQFTD
DPRTEFKLDAYKTKETLLDAIRHISYKGGNTKTGKAIKYVRDTLFTAESGTRRGIPKVIV
VITDGRSQDDVNKISREMQADGYNIFAIGVADADYAELVRIGSKPSARHVFFVDDFDAFK
KIEDELITFVCETASATCPMVHKDGTDLAGFKMMEMFGLVEKDFSAVEGVSMEPGTFNLF
PCYQIHKDALVSQPTKYLHPEGLPSDYTMSFLFRILPDTPQEPFALWEILNKNSDPLVGI
ILDNGGKTLTYFNYDYTGDFQTVTFEGPDIRKMFYGSFHKLHVVISKTLAKVVVDCKEVG
QKAINASSNITSDGVEVLGRMVRSRGPNGNSAPFQLQMFDIICSTTWANKDRCCELPGLR
DEEACPDLPRSCSCSETNEVALGPAGPPGGPGLRGPKGQQGEQGPKGPEGPRGETGPAGP
QGPPGPQGPSGLSIQGMPGMPGDKGDKGDAGLPGPQGVPGGVGSPGRDGSPGQRGFPGKD
GSSGPPGPPGPIGIPGAPGVPGITGSMGPQGASGPPGVPGPKGERGERGDLQSQAMVRAV
ARQVCEQLIQSHMARYTAILNQIPSHSSSIRTIQGPPGEPGRPGSPGTPGDQGPPGAPGF
PGNAGVPGTPGERGLTGLKGEKGNPGIGTQGPRGPPGPAGPSGESRPGSPGPPGSPGPRG
PPGHLGVPGPQGPSGQPGYCDPSSCSAYGVGVSHPDQPEFTPVQDEQEAMDLWSSSI
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttttcagcgtgagatgcggttctggctgcttctggcttttttggcggttgct
tacttctgcaccatcgtccggagtcaagtggctcctcccacaaggttaagatacaatgta
atatcccacgacagtatacagatttcatggaaagctcccagagggaaatttggtggatac
aaactactcgtggctccagcttcaggggggaaaaccaaccagctgaatctgcagaacgct
gcaacaaaagcgattatccaaggccttctgccagagcagaattacacggttcaacttatc
gcctacaataaagacaaagaaagcaaaccagctcaaggccagttcagaattaaagattta
gagaaaagaaaggatccgacaaagcccagagtcaaggttgtggacaaaggaaatggaagt
aaatcaacttcaccagaagagataaaattcttttgtgagactccagccatcgctgacatt
gtcatcctggtcgatgggtcgtggagtattgggagattcaacttcaggctggtgcggaat
ttcttggaaaacctggtcacagcgttcaacgtgggctcagagaagacccggattggcttg
gcacaatacagtggggaccccagaatagagtggcacttgaatgcctttaacacaaaagat
gaagtgattgacgctgtccgaagccttccctacaaaggaggaaacactctaacaggcctt
gctctgaacttcatttttgagaatagctttaagccagaagcagggtcaaggagtggagtt
cccaagatcggcattttaatcacagatggaaagtcccaagatgatattatcccaccatcc
agaaacctccgggagtctggtgtagagctctttgccataggggttaaaaatgctgacctg
aatgagctgcaggagatcgcctctgagccagacagcactcacgtctacaatgttgctgaa
ttcgacctgatgcacacagtagtggagagcctgaccaggactgtgtgctccagagtggaa
gagcaagacagggagattaaagcctcagcccttgccaccattgggccacctacagagctg
atgacttctgaagttaccgccaggagctttatggttaactggactcacaccccaggaaaa
gtggaaaagtacagagtggtgtattatcccacccgaggtgggaaaccggaagaggtggtg
gtgggcggaagtgtgtcttctgtagtgttgaaaaacttgatgtcatcgactgagtaccag
atagcagtgttcgcagtatctgcccacacagccagtgaaggcctgcggggaacggaaacc
acactggccttacccatggcttccgacctggagctgtacgatgtgaccgagagcagcatg
cgtgtgaagtgggacgcggtgcctggcgccacgggctatctgatcctctatgctcctctc
actgaagggctggctggggatgaaaaagagatgaaaattggagagacccacacagacatt
gagctgagcggcctgttccccaacacagaatatacagtcaccgtgtacgccatgtttgga
gaagaggccagcgaccctgctacagggcaagcgacaaccctgcccttaaccccaccaaga
aatttgagaatctccaacattggctctaatagtgctcggttaacctgggatcccacatca
agaaagatcaatggttacagaattgtgtataccagtgcagatgggacagaaatcaacgag
gttgaagttgatcccatcactacgttccccctgaaaggcttgacccccctcacggagtac
tccgttgccattttctccatctatgaggaggggcagtccctgcctctggttggagacttt
acaacagaggaagttcccgcccagcaatacttggaaattgatgaggtgaagacagacagt
ttccgggtgacctggcatccgctctcggctgaggaagggcaacacaaactcatgtggatt
ccagtctatggcgggaagactcaggaggttgccctcaaggaagagcaggactcctacgtt
gttgaaggcctggaccctggaactgagtatgaagtctcgctgttagctgtgctcgatgac
ggcagcgagagcgaagtggtgactgctgtggggaccacacttgatgacttttggacacaa
gcacccacaactgtagaacctaccagccctgtgacttcagttctccagacgggaatcaga
aacctggttgtagatgatgaaacttctactagcctgcgggtcacatgggacatttctgac
agcaatgtggagcagtttcgggtgacctacctgacagcccaaggggaccctatggaagaa
gtggtaggaacggttctggtgcctggaatgcagaacaatatccttctgaagactctaatt
ccagacaccgaatacaaagtcaccgtgactcccatctacacaaccggagaaggcgtcagc
gtctccgcccctgggagaactttgccgtcttctggacctcagaacttacgggtctcggaa
gaatggtacaaccggttgcgcattacatgggacccaccatctgcccccgtgaagggctat
aggattgtctacaaacctgtgagcgttcctggtcaaactctggagacgttcgtgggcgct
gacattaacaccattgttatcaccaatctcctcagtggaatggactataacgtgaagata
tttgcttcccaggccgcaggcttcagcgacgctctgactggcctcgtgaaaaccctgttc
ttaggtgtgacggatctccaagcccatcaggttgaaacaacaagcttgtgtgctcggtgg
caaatacaccgccatgccaccgcctataggatagttctagaatcccttcaggatacacat
gcacaagaatctaccttggggggaggtgtaaacaggcattgcttctacggacttcagcca
gattcagactataaaatcagtgtttacacgaagctccaggagatcgagggaccaagtgtg
agcatcatgcaaagaacacaatcacttcccaccgagccaccaacgtttgctccaaccatt
ccaccagcaaaggaagtatgtaaagcagccaaggcagacctagtgttcatggtggatgga
tcctggagtattggagatgacaatttcaataagatcatcaattttctgtgtagcactgtg
ggagccctggacaagattggtgcagatggaactcaggtggcaatggtgcagttcactgat
gaccccagaacagaattcaaactcgatgcttacaaaaccaaagagacgcttcttgacgca
atcagacacatttcctacaaaggcggaaatactaaaacaggaaaagctattaagtacgtt
cgcgataccttgttcactgcggagtcaggtacaagaagaggcatcccgaaggtcatcgtg
gttatcactgatggaagatcacaagatgatgtcaacaaaatctccagggagatgcaggcc
gatggttacaacatctttgccattggtgtggccgatgccgattatgcggagttggttcgg
attggcagcaaacccagcgcacgccatgtcttctttgtggatgactttgatgccttcaag
aaaattgaagatgaattaattacttttgtctgtgaaaccgcatcagcaacctgcccaatg
gtgcacaaggacggaactgacctggcaggatttaagatgatggaaatgtttggtttagtt
gaaaaggatttttctgcagtagaaggagtttctatggaacctggcaccttcaatttgttc
ccgtgctatcaaatccacaaagatgctctggtttcccagccaaccaagtatctgcatccg
gaagggctgccatctgactatacaatgagtttcctgttccggattcttcctgacactcca
caggagccatttgctctttgggagattttaaataaaaattctgacccactggttgggatc
attttagacaatggagggaaaactctgacttatttcaactatgactatactggagatttt
caaactgttacttttgaaggacctgacatcaggaaaatgttctatggaagctttcacaag
ctccatgttgttatcagcaagactttggccaaagtggtcgttgactgtaaggaagtgggc
cagaaggcaatcaacgcatcctccaatatcacgtcggatggtgtggaagtactggggaga
atggtcaggtcaagaggacccaatggaaactctgcaccattccagttacagatgtttgat
atcatttgctctacaacgtgggccaataaagacagatgctgtgaacttcccggcctgagg
gatgaagaggcttgcccagacctcccacgttcctgctcttgctcagaaactaacgaagtg
gctctaggaccagctggccccccaggtggtccaggactccgaggacctaaaggccaacaa
ggtgaacagggtccaaagggaccagagggccctcgaggggaaacaggtcctgcaggaccc
cagggtcctcctggaccccaagggcccagtggtctgtccattcaaggcatgcctggtatg
cccggtgacaaaggagataaaggagatgctggccttcctggtccacagggtgtccctgga
ggtgtgggttcaccaggacgtgatggctcaccaggccagaggggatttcctggaaaggat
ggttcttctggtcctccagggccacctgggccaattggcattcctggagcccctggtgtc
ccagggatcacagggagcatgggaccacaaggagcctcggggccgcctggtgtccctgga
ccaaagggagagcgaggtgaacgaggagacctgcaatctcaggccatggtgagggcagtg
gcacgccaagtgtgtgagcagctcatccagagtcacatggccaggtacacggccattctc
aaccagattcccagtcattcctcatccatccggaccatccagggccctcccggggagcct
gggagaccaggttcacctggaacccctggagaccaaggacctccaggtgccccaggcttc
ccgggtaatgcaggtgtgccggggaccccaggagaacgaggtctaaccggtcttaaagga
gagaaaggcaatccaggcattggaactcaaggcccaagaggtccccctggaccagcagga
ccctcaggggaaagtcgtcctggcagtcctgggccacctggctctcctggaccaaggggt
cccccaggccacctgggagtgcctggaccacagggtccttctggccagcctggatattgt
gacccatcgtcgtgttctgcctacggtgttggagtgtcccatccggatcagcctgagttc
accccggtccaggacgagcaggaggccatggatctgtggagctcgagcatctga
DBGET
integrated database retrieval system
