KEGG   Arvicola amphibius (Eurasian water vole): 119823516
Entry
119823516         CDS       T08327                                 
Name
(RefSeq) high mobility group protein B1-like
  KO
K10802  high mobility group protein B1
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Pathway
aamp03410  Base excision repair
aamp04140  Autophagy - animal
aamp04217  Necroptosis
aamp04613  Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    119823516
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    119823516
  09143 Cell growth and death
   04217 Necroptosis
    119823516
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    119823516
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aamp03036]
    119823516
   03400 DNA repair and recombination proteins [BR:aamp03400]
    119823516
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aamp04147]
    119823516
Chromosome and associated proteins [BR:aamp03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    119823516
DNA repair and recombination proteins [BR:aamp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     119823516
   MMR (mismatch excision repair)
    Other MMR factors
     119823516
Exosome [BR:aamp04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   119823516
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 HMG_box_5
Other DBs
NCBI-GeneID: 119823516
NCBI-ProteinID: XP_038199495
LinkDB
Position
9:complement(83456298..83456789)
AA seq 163 aa
MSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKEKFEDMAKADKAPYE
REMKTYIPPKGETKKKFKDPNAPKRPPSAFLFCSEYRPKIKGEHPGLSIGDAAKNLGEMW
NNTAAHDKQPYEKKAAKLKEEYEQDIAAYRAKGKPDAAKRGRG
NT seq 492 nt   +upstreamnt  +downstreamnt
atgtcctcgtatgcattctttgtgcaaacttgccgggaggaacacaagaagaagcacccg
gatgcttctgtcaacttctcagagttctccaagaaatgctcagaaaggtggaagaccatg
tctgctaaagaaaaggaaaaatttgaagacatggccaaggctgacaaggctccttatgaa
agagaaatgaaaacctacatcccccccaaaggggagaccaaaaagaagttcaaggacccc
aatgcacccaagaggcctccttcggccttcttgttctgttctgagtatcgccccaaaatc
aaaggagagcaccctggcttatccattggtgatgctgcaaagaacctgggagagatgtgg
aacaacaccgctgcacatgacaagcagccctacgaaaagaaggctgccaagctgaaggag
gagtacgaacaggatatcgctgcctacagagctaaaggaaaacctgatgcagcgaaaagg
ggtcgggggtag

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