Arvicola amphibius (Eurasian water vole): 119823530
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Entry
119823530 CDS
T08327
Symbol
Stx1b
Name
(RefSeq) syntaxin-1B isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04130
SNARE interactions in vesicular transport
aamp04721
Synaptic vesicle cycle
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
119823530 (Stx1b)
09150 Organismal Systems
09156 Nervous system
04721 Synaptic vesicle cycle
119823530 (Stx1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119823530 (Stx1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aamp04147
]
119823530 (Stx1b)
Membrane trafficking [BR:
aamp04131
]
SNARE
Syntaxin (Qa)
Stx-PM
119823530 (Stx1b)
Exosome [BR:
aamp04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
119823530 (Stx1b)
Exosomal proteins of other body fluids (saliva and urine)
119823530 (Stx1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
AAA_13
Lzipper-MIP1
Spectrin_Anc-1
Relaxase_C
GNVR
FAD_binding_1
Baculo_PEP_C
ARM_ECM29
TolA_bind_tri
CAP_N
VBS_C3G9
Motif
Other DBs
NCBI-GeneID:
119823530
NCBI-ProteinID:
XP_038199521
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All DBs
Position
1:complement(129948671..129986553)
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AA seq
289 aa
AA seq
DB search
MAPGPFYRVLKAKDSDDEEEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSA
ILAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQH
STLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDD
IKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHS
VDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGVVLASSIGGTLGL
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggctccaggccccttttacagagtcttgaaggcgaaagacagcgatgatgaagaggag
gtggtccacgtggatcgagaccactttatggatgagttctttgaacaggtggaagagatc
cgaggctgcatcgagaaactgtctgaggatgtggagcaggtgaagaaacagcacagcgcc
atcctcgctgcccccaacccggatgagaagaccaaacaggagctggaggacctcacagca
gacataaaaaagaccgcaaacaaggtccggtccaagttgaaagcgatcgagcaaagcatt
gagcaggaagaggggctgaatcgttcctcagctgacctgcgcatccgcaagactcagcac
tccaccctctcgcggaagttcgtggaggtaatgaccgagtataacgcaacccagtccaag
taccgggaccgctgcaaggaccgcatccagcggcagctggagatcactggcaggaccact
accaatgaagagctggaagacatgttggaaagcgggaagctggccatcttcacggacgac
atcaaaatggactcgcagatgacaaagcaggcactaaatgagattgagaccaggcacaat
gagatcatcaaactggagaccagcatccgagagcttcacgacatgtttgtggacatggcc
atgctggtggagagccagggcgagatgattgaccgcatcgaatacaatgtggaacattcc
gtggactatgtggaacgagctgtgtccgacaccaagaaagctgtgaaatatcagagcaag
gcgaggaggaagaaaatcatgatcatcatttgctgtgtggtgctgggggtggtcttggcg
tcatctattggggggacactgggcttgtag
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