Arvicola amphibius (Eurasian water vole): 119823861
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Entry
119823861 CDS
T08327
Symbol
Herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119823861 (Herc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119823861 (Herc4)
Enzymes [BR:
aamp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119823861 (Herc4)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
HECT type E3
119823861 (Herc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
119823861
NCBI-ProteinID:
XP_038199872
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All DBs
Position
9:105062012..105136212
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AA seq
1057 aa
AA seq
DB search
MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC
NDLGQLGHEKSRKRPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG
SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQTS
PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR
SQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVA
CGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFSYNGQCPQDIDTED
YFCVKRIFSGGDQSFSHYSSPQSCGPADDFRCPDPSKQIWTINEALIQKWLSYPSGRFPV
EIANEIDGTFSSSGCLNGSFLATSNDDHYRTGPKFSGVDMNAARLLFHKLIQPDHPQISQ
QVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDSNNFTTIAIPFGTALVNLEKAP
LKVLENWWSILEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEIL
HRVNEKTGHLIQYDKFYIHEVQELIDIRNDYINWVQQQAYGVDVSHGLTELADIPVTICT
YPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPCLILVVRRENIVG
DAMEVLRKTKNIDYKKPLKVIFVGEDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSR
LIWFSDQTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKKLLKRKPSLDDLKELMPD
VGRSMQQLLDYPEDDIEETFCLNFTITVENFGATEVKELVLNGADTAVNKQNRQEFVDAY
VDYIFNKSVASLFDAFHAGFHKVCGGKVLLLFQPNELQAMVIGNTNYDWKELEKNTEYKG
EYWAEHPTIKIFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSLKLVIQSTGGGESYLP
VSHTCFNLLDLPKYTEKETLRSKLIQAIDHNEGFSLI
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgctggggaaatgcatcgtatggacagctaggtctgggtggaattgatgaagaa
attgtacttgagcccagaaaaagtgacttttttgtcaataaaaaggtccgcgatgtaggc
tgtggactcagacacactgtatttgtcctggatgacgggactgtgtacacatgtggatgc
aatgatctggggcagctgggtcatgagaagtcaaggaagagaccagagcaggttgttgcc
ctggatgcccaaaatatcgtagctgtttcatgtggagaagctcatacattagcacttaat
gacaagggccaggtgtatgcttggggtctcgactctgatggacaacttggcctcctagga
tcagaggaatgtatcagagtacccagaaatattaaaagtctttcggatatccaaatagta
caggttgcatgtggttactatcactcacttgcactttctaaagcaagtgaagttttctgt
tggggacagaataaatatggccagctgggtctaggcattgactataaaaagcagacttca
ccacagctcattaagtctttacttggaattccattcatgcaagttgcagcaggaggagcc
catagttttgtactcaccctttctggggctatctttggatggggacgtaacaaatttggt
cagctaggtcttaatgatgaaaatgataggtatgttcctaatttactaaagtcactaaga
tctcagaaaatagtttatatttgttgcggagaagatcatactgctgcattaaccaaggaa
ggtggagtgttcacctttggagccggagggtatggccagttgggtcataattctaccagt
catgaaataaacccaaggaaagtttttgaacttatgggaagtattgttactcaggttgct
tgtggaaggcagcatacctctgcatttgttccttcttcaggacgaatttactcctttggt
cttggtggtaatgggcagttgggaactggctcaacaagcaacagaaaaagtcctttcact
gtaaaaggaaattggttttcttataatgggcagtgtccacaagatattgatactgaagac
tatttctgtgtcaaaagaattttctcaggtggagatcaaagcttttcacattattctagt
cctcagagctgcggcccagcagatgacttcagatgccctgacccttcaaagcagatctgg
acaataaatgaagctctgattcagaagtggctcagctacccttctggaaggtttcctgtg
gagatagccaatgagatagatggaacattttcttcatctggttgcctaaatggaagtttt
ttagctactagcaatgatgatcactatagaacaggtcccaaattttcaggggttgatatg
aatgctgctagacttctatttcacaaactaatacaacctgaccatcctcagatatctcaa
caggtggcagctagtttggaaaagaatcttatacctaaactgactagctccttacctgat
gttgaagcattgaggttttatcttactctaccagagtgtcccctgatgagtgactccaac
aatttcacaacaatagcaattccctttggtacagctcttgtgaacctagaaaaggcacca
ctcaaagtccttgaaaactggtggtcaatacttgaacctccactattcctcaagatagta
gaactttttaaggaagttgtggtacatcttttgaaactctacaagatcggcattccccct
tctgaaagaagaattttcaacagttttcttcatactgcattaaaggttttagaaatatta
catagggtaaatgagaaaacaggacaccttatacaatacgacaaattctatatacatgaa
gtacaagaattgatagacataagaaatgactatatcaactgggtccaacagcaagcctat
ggagtggatgtcagccatggattaactgagttggccgatatccctgtgacaatttgtaca
tatccatttgtatttgatgcccaagcaaaaactactctgttacaaacagatgcagtctta
cagatgcagatggctattgaccaggcccacagacagaatgtctcctctctttttctccca
gtgattgagtctgtgaatccctgcttaattctagtggttcgcagagaaaacattgtagga
gatgcaatggaagtcctcaggaaaaccaagaacatagattacaaaaagccactcaaagtt
atatttgttggagaagatgctgttgatgcgggaggtgtacgcaaagaatttttcctgctc
atcatgagggaattgttggatcctaaatatggcatgtttcgatattatgaagattccagg
cttatttggttttcagatcagacatttgaagacagtgatttgttccacttaattggtgtt
atctgtggcttagcgatctataattttactatcgtggacctccattttcctctggcttta
tataagaaactgctgaaacggaagccatccctggatgacctgaaggagctgatgccagat
gttgggagaagcatgcagcagttgttagactatccagaagatgatatagaggaaacgttt
tgtctgaatttcacaatcacagttgaaaacttcggtgcaacagaagtgaaagagctggtt
ctgaatggtgcagacacagctgttaacaaacaaaatcggcaagagtttgttgatgcctat
gtggattacatattcaataaatcggtggcatctttatttgatgctttccatgcaggcttt
cataaagtctgtggaggaaaagttcttctgctctttcagcctaatgaattacaagctatg
gttattgggaatacaaattacgactggaaagaactggagaagaacacagaatacaaaggg
gagtattgggcagaacatcccacaataaaaattttttgggaagtatttcatgaattacca
ctggaaaagaagaagcaatttctattatttttgacaggtagtgatcgcattcccattctt
ggtatgaagagtctgaaactagtcatccagtcaacaggaggtggtgagagctatcttccg
gtttcccatacctgttttaatcttttagatctaccaaaatatacagaaaaagaaactcta
cgatctaaattgatccaagctattgatcacaatgaaggcttcagtttaatataa
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