Arvicola amphibius (Eurasian water vole): 119823921
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Entry
119823921 CDS
T08327
Symbol
Pou5f1
Name
(RefSeq) POU domain, class 5, transcription factor 1
KO
K09367
POU domain transcription factor, class 5
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
119823921 (Pou5f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aamp03000
]
119823921 (Pou5f1)
03021 Transcription machinery [BR:
aamp03021
]
119823921 (Pou5f1)
Transcription factors [BR:
aamp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
119823921 (Pou5f1)
Transcription machinery [BR:
aamp03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
119823921 (Pou5f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
HOCHOB
AcnX
Motif
Other DBs
NCBI-GeneID:
119823921
NCBI-ProteinID:
XP_038199969
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All DBs
Position
9:124471972..124476249
Genome browser
AA seq
355 aa
AA seq
DB search
MAGHLASDFAFSPPPGGGDGSGGLEPGWVDPRTWISFQGPPGGPGIGPGVGPGSEVLGIS
PCPPPYEFCGGMAYCGPQVGLGLVPQVGLETSQPDDQAGAESNSEGASPEPGTVRPGAVK
LEKVEPSPEESQDMKDLQKELEQFAKVLKQKRITLGYTQADVGLTLGVLFGKVFSQTTIC
RFEALQLSFKNMCKLRPLLEKWVEEADNNENLQEICKTETLVQARKRKRTSIENRVRGNL
ESMFLQCPKPTLQQISIIAKQLGLEKDVVRVWFCNRRQKGKRSSADYAQREEYEAAGPPF
PGGPVSFPLPPGPHFGAPSYGSPHFTTLYSPVPFPEGEAFPTVPIAALGSPMHSN
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggctggacacctggcttcagacttcgccttctcacccccacctggtggtggtgatggg
tcgggagggctggagccaggctgggtggaccctcggacttggataagcttccaagggcct
ccaggtgggcctggaatcgggccaggggttgggccaggctcagaggtgttggggatctcc
ccttgtcccccgccatatgaattctgtggagggatggcatactgtggacctcaggttgga
ctgggcctagtgccccaagttggcctggaaacttcgcagcccgatgatcaggcaggagcg
gagagcaactcggagggggcctcccctgagcccggcactgtccgccccggtgccgtgaag
ttggagaaggtggaaccaagtcccgaggagtcccaggacatgaaagatctgcagaaggag
ctagagcagtttgccaaggtgctgaagcagaagaggatcaccttggggtacacccaggcc
gacgtggggctcaccctgggtgttctctttggaaaggtgttcagccagaccaccatctgc
cgctttgaagctctgcagctgagcttcaagaacatgtgcaagctgcgccccctgctggag
aagtgggttgaggaagccgacaacaacgagaaccttcaggagatatgcaaaacggagacc
ctggtgcaggctcgaaagagaaagcggacgagcattgagaaccgcgtgagggggaacctg
gagagcatgtttctgcagtgcccgaagcccaccctacagcagataagcattatcgccaag
cagctcggcctggagaaggatgtggtccgagtgtggttctgtaaccgtcgccagaagggc
aaacgatcgagcgctgattatgcccaacgagaagagtatgaggctgccgggccccctttc
ccagggggtcctgtatcttttcctctacctccagggccccattttggtgccccaagctat
gggagcccccactttaccacactctactctccagtcccgtttcctgagggcgaggccttt
cctactgttcccattgctgctctgggctctcccatgcattcaaactga
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