Arvicola amphibius (Eurasian water vole): 119823925
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Entry
119823925 CDS
T08327
Symbol
Jmjd1c
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
119823925 (Jmjd1c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119823925 (Jmjd1c)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
119823925 (Jmjd1c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
JmjC
FYVE
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
119823925
NCBI-ProteinID:
XP_038199976
LinkDB
All DBs
Position
9:108171207..108345083
Genome browser
AA seq
2347 aa
AA seq
DB search
MQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEPQNVDPSMVQMTF
LDDVVHSLLKGENIGITSRRRSRATHNTNTVHGHYTRAQANSPRPAMNSQAAVPKQNTHQ
QQQQRNIRPNKRKGSDSSIPDEEKMKEEKYDYISRGENPKGKNKHVVSKRRKPEEEEKRA
NTKRLRTDNTSDVSESSDSENSNKRVSENSSEHTPEHELKTKVTSKVNGAEGKSQIVEKT
GGETLMDTQPRWDQMQEDKTREEGEKLKSMDSHIQEKMTVRSSEQATVADHNPNDSVLQE
CNMENTRTVELLPKEKLVSRTPTPKCAVDIKNDTHPERVAQENSNTFGLQTLENMDPNVS
DSKHSHTKYLETAKQDSDQSWVSDIVKVDLTQSSVINTSSGNDHRDVDKERNHYVSYMSS
LSTVSVTEDQLHKRSPPPETIKSKLTTSVDTQKTKSNSSPEVVKPKITHSPDSVKSKAPY
VNSQAAGERRLASKIEHELSRCTFHPVPTRSGALETTKSPLIIDKNEHFTVYRDPALIGS
ETGTNHISPFLSQHHFPLPSSSHRTCLNPGTHHPALTPGSHLLAGSSSQTPLPTLNTHPL
TSGPHHSVHHPHLLPTVLPGVPTASLLGGHPRLESAHASSLSHLALAHQQQQQLLQHQSP
HLLGQAHPSASYNQLGLYPIIWQYPNGAHAYSGLGLPSSKWVHPENAVNTEASLRRNSPS
PWLHQPTPVTSTDGIGLLTHIPVRPSSAEPHRPHKMTVHSSSPVAKTLVDHHKEELERKA
FMEPLRCNASTSMKSDLDLNRSQGGKDCHLHRHFVGPRPPQETGERLNKYKEEHRRILQE
SIDVAPFTTKIKGPEVERENYSRVAPSSSSPKSHAIKQDKDVERSVSELYKMKHSVPQSL
PQSNYFTTLSNSVVNEPPRSYPSKEVSNIYTEKQNNNLSAAANPQSLSFIPSLSKPPPLI
KHQPESETLVSKIPDHLSHQIASHSVTTFRSDCRSPTHLTVSSTNALRSMPALHRAPVFH
PPIHHSLERKESSYSSLSPPTLTPVMPVNAGTKVQESQKPPTLIPEPKDSQANFKSSADQ
NLTEMWKSNNNLSKEKAEWPVEKSSGKSQAAVASVIVRPPSSTKVDSVPSVPLASKDRVC
ERSSSGASKTDYLKPESGETGRVILPNVNLENAHVKSEKNVEAVSQGSVPVSVMSAVNVV
CNTKTDVFTSAAITTSVSSLGGSETVYSLSNTILASTSLECTSKSVTQAVAQTKECKVST
PGPVTVACSKTGSGGQPSSGFSGTTDFIHLKKHKAALAAAQYKNSNVSEAELNTVRNQTA
AASFPLDNTMICGASNKAISVGNGPAAQTSQPNYHTKLKKAWLTRHSEEDKNTNKMENSG
NSVSEIIKPCSVNLIASTSNDIQNSVDSRVTGDKCGRDDKASRRKTKRTYESGSESGDSD
ESESKSEQRTKRQPKPTYKKKQNDLQRRKGENEEDVKPNGVLSRSAKEKSKLKLQSSNSA
GIPRSVLKDWRKVRKLKQTGESFLQDDSCCEIGPNLQKCRECRLVRSKRGEESAHSPVFC
RFYYFRRLSFSKNGVVRIDGFSSPDQYDDEAMSLWTHENYEDDEIDVETSKYILDIIGDK
FCQLVTSEKTALSWVKKDAKIAWKRAVRGVREMCDACEATLFNVHWVCRKCGFVACLDCY
KAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTDLLDAMHVLREKYGIKSH
CHCTNKQNIQAGNFPTINGVSQVLQNVLNHSNKSSLCVPESQQQTTPQKSQSNGDSSPGS
VSTDSRLTPPESQSPLHWLADLAEQKAREEKQENNEFALEKEIKEEGEQDASDSPNDSAS
PPASQNNEQGSTLRDLLTTTAGKLRVGSTDAGIAFAPVYSMGASSGKSGRTMPNILDDII
ASVVENKIPPNKAAKINVKSEPNEDPKESRKSAMNESNKLYSDIPHSWICDQHIIWLKDY
KNSNNWKLFKECWKQGQPAVVSGVHKKMNMSLWKAESISLDFGDHQADLLNCKDSIISNA
NVKEFWDGFEEISKRQKNKSGETVVLKLKDCPSGEDFKTMMPARYEDFLRSLPLPEYCNP
EGKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNLHVEASDVVNILVYVGVAK
GNGVLSKAGILKKFEEEELDDVLRKRLKDSSELPGALWHIYAGKDLDKIREFLQKISKEQ
GLEVLPEHDPIRDQSWYVNRKLRQRLLEEHGVRACTLIQFLGDAIVLPAGTLHQVQNFHS
CIQVTEDFVSPEHLVQSFHLTQELRLLKEEINYDDKLQVKNILYHAVKEMVRTLKMHEDE
VEDMEDT
NT seq
7044 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggtccttattctttaaatggatacagagtgagagtatatagacaagattctgcc
acccagtggtttactggcataattactcatcatgatctcttcacccgcaccatgatcgtt
atgaatgatcaggtactagaaccacagaatgtcgatccttctatggttcaaatgaccttt
ctagatgatgtcgttcactctttgttaaaaggtgaaaatattggcattacatcacgacgc
aggtctcgtgccactcataataccaacactgttcacggtcattatacacgtgctcaagca
aatagtcccagaccagcaatgaactctcaagctgctgtaccaaaacagaacacacaccag
caacagcaacaaagaaatattcgtccaaataagagaaagggctcagatagcagtatacct
gatgaagagaagatgaaggaagaaaaatatgattatatatcacgaggagaaaatcctaaa
ggtaaaaacaaacacgtggtgagtaaaagaaggaagcccgaggaggaggagaagagagct
aacacgaagaggcttcggactgacaacacttcagatgtttctgagagcagtgactcagaa
aattcaaataagagagtaagtgagaattcctctgagcacacaccagagcatgagctgaaa
actaaagtcacctcaaaggtaaatggagcagagggaaaatcccagattgttgagaagaca
ggaggagagaccttaatggacactcagcctcgctgggatcagatgcaagaagataaaacc
cgtgaagaaggggagaagctgaagtccatggacagccacattcaagaaaaaatgactgtc
cgttcatcagagcaggctacagttgctgaccataatcctaatgattcagttcttcaagaa
tgcaatatggaaaacacgcgcacagtggaattattaccaaaggaaaagttagtatccaga
acaccgacacccaaatgtgctgtggatatcaaaaatgacacccatccagagagggtggct
caggaaaactcaaatacgtttggcctccagacacttgagaacatggatcctaatgtcagt
gattctaaacattctcatactaaatacctagaaacagcaaagcaagattctgaccaaagc
tgggtcagtgatatagtgaaagtggatttaactcaatcaagtgttataaatacttcttca
ggaaatgatcaccgagatgtggataaagagagaaatcactatgtctcttacatgtcttca
ttaagtacagtttctgtcacagaggatcagctacataagagaagtccacccccagaaact
ataaaatctaaattaactacttcagtagatactcagaagacaaaatccaattcttctcct
gaagttgttaaacccaagattactcattctcctgattctgtaaagtctaaggctccttac
gtgaatagtcaagctgctggtgagaggaggctggcaagtaaaatagagcatgagttgtcc
aggtgtacttttcacccagttcctactcgaagtggtgctctggaaactacgaagagccct
ctaatcattgacaaaaacgagcacttcacagtttatagagatcctgctcttattggatca
gaaacaggaactaatcacatttcaccatttttgagccagcatcatttccctcttccttcg
tcatcccatagaacctgtttaaacccaggtacccatcaccctgccttaacaccaggatcc
cacttactagctgggtcatctagtcaaactccattacctacccttaacactcaccctctc
actagtggtccacaccattctgtccatcatcctcatttacttcccactgtgttacctgga
gtgcctactgcctccttacttggtggccacccacgcctagagagtgcgcatgccagcagc
ttgagccatttagcgctagcacaccagcagcagcaacagttgttacaacaccagtcacct
catcttcttggacaagcccatccttctgcttcatataatcagcttggactttatccaatt
atttggcaatatccaaatggagcacatgcatactcaggacttggtctaccttcttctaag
tgggttcacccagaaaatgcagttaatactgaagcttcattaaggaggaattctcccagt
ccttggttacatcaacctactcctgtgacctcaacagatggtattggattacttactcac
attcctgtcagaccttctagtgcagagcctcatcgacctcataaaatgacagtgcattcc
agttcaccagtggcaaaaaccttagtagatcaccacaaagaagaattggagaggaaagct
ttcatggaaccattacggtgtaatgcatccacatcaatgaaaagtgacctggatcttaat
aggtcacagggaggaaaggattgtcacttgcataggcattttgtgggtccgaggccacct
caggagactggagagagactgaacaaatacaaggaggaacatcgtcggattcttcaagag
agtattgatgttgccccttttacaacaaaaatcaaggggcctgaggttgaaagagagaat
tactccagggtagcaccatcatcttctagtcctaaaagccatgccatcaaacaagataaa
gatgtggaacgctcagtatcagagctttataagatgaagcactcagtgcctcagagtttg
ccccaaagtaactatttcactacattatctaatagtgtggtcaatgaaccaccaaggtcc
tacccatccaaagaagtttcaaatatttacactgaaaaacagaataataacctttctgca
gcagccaatccgcaatctctttcatttataccatctctttcaaagcctccacctttgatt
aaacaccagccagaaagtgaaactttagtaagcaagataccagaccatctttcccatcag
attgcatctcactcggtaacaacgttcagaagtgattgtagaagtcccacccatttgact
gtctcttctacaaatgcacttcgcagtatgcctgctttgcatagggccccagtattccac
ccaccaatccatcacagtttggaaagaaaggaaagtagctacagtagcctttcccctcca
actctgaccccagtgatgccggtgaacgctggcaccaaagttcaagaatcccagaagcct
ccaactctaattcctgagccaaaagactcccaagcaaattttaagagttctgctgatcag
aatttaacagaaatgtggaagtctaacaacaacctcagcaaggagaaggctgagtggcct
gtggaaaaaagcagtggaaagtcacaggctgccgtggcatctgtcattgtccgtccacca
tctagtacaaaagttgatagtgtcccatcagtaccattagcttccaaagatagagtttgt
gaaagatcttcatctggggcaagtaaaacagattacctcaaaccagaatccggagagact
ggaagagtcattctgccaaatgtgaatttagaaaatgctcatgtaaaatctgaaaaaaat
gttgaggctgtctcccagggcagtgttcctgtttcagtcatgtctgctgtaaatgtggtc
tgtaataccaaaacagatgtattcacatctgctgccattaccaccagtgtttccagcttg
ggtggttcagaaacagtttattctttatcaaataccattttggcctctacatccttagaa
tgtacttcaaaaagtgttactcaagcagtggcccaaacaaaggaatgcaaagtcagcacc
ccggggccagtcactgtggcctgtagtaagacagggagtggtggtcagcctagctctggc
ttctcaggcacaactgattttattcatttaaaaaagcacaaggcagcattggctgcagct
cagtataaaaatagtaatgtcagtgaggctgaacttaatactgtgagaaatcagacagca
gcagcctcttttcccctggataacaccatgatttgtggtgcaagtaacaaagcaatctct
gtaggaaatgggccagcagcccagaccagtcagcccaactaccacactaaactgaagaag
gcctggcttaccagacattcagaagaagataaaaatactaataaaatggaaaattcaggg
aattctgtatcagaaattattaagccatgttctgtcaatttaatagcttctacatctaat
gatatacaaaatagtgtagatagcagagtcacgggagataagtgtggaagggatgataaa
gccagcaggagaaaaaccaaaagaacttacgaatctggctctgaaagtggagactcggat
gaaagtgagagcaagtcggagcagaggactaagcggcagcctaagccaacttataaaaag
aagcagaacgatctacagagaaggaaaggcgagaatgaggaagacgtgaaacccaatggc
gttctcagcaggagtgccaaggagaaaagtaagctgaagttgcagagcagtaatagtgct
ggtattcctcgttcagtgctgaaagactggcgaaaggtcagaaagctgaagcaaaccgga
gagtcctttctgcaagacgattcttgctgtgagatagggcccaacttacagaagtgccgg
gagtgcaggctcgtccgcagtaagagaggggaagagtcggcccactcgccagtgttttgt
agattctactactttaggagattgtcatttagtaagaatggagtggtcaggatagatggt
ttctcttctcctgaccaatatgatgatgaagccatgagtttatggacacatgaaaattat
gaagatgatgaaatagatgttgaaacctctaaatatatcttggatataataggtgataag
ttctgtcaattagtaacatctgagaaaacagctttgtcctgggtgaaaaaagatgccaaa
attgcctggaaaagagcagtgcgaggtgtccgggagatgtgtgatgcgtgtgaagcgacg
ctgtttaatgtccactgggtctgccgcaagtgtgggttcgtggcttgcttggattgttac
aaggccaaggagaggaagagttctagagataaagagttgtatgcttggatgaagtgtgtg
aaaggacagcctcacgatcataaacatttaatgccaactcaaattatacctggttctgtg
ttgacagatcttcttgatgccatgcacgtacttagggaaaaatacggtattaaatcccat
tgtcactgtactaacaaacagaacatacaagctggaaattttcctacaataaatggtgtg
tctcaagttttacagaatgttcttaaccacagtaataaaagttctctgtgcgtgcccgag
tctcagcagcagaccactccccagaaatctcagagtaatggcgatagcagccctggaagt
gtaagcacagacagcaggttgacccctccagagtcccagtcaccgctgcattggctagct
gatcttgctgaacaaaaagccagagaggaaaaacaagaaaacaatgaatttgctcttgaa
aaggaaattaaagaagagggagaacaagatgcctctgactctccaaatgacagtgcatca
cctccagcttcccagaacaacgaacaaggttcaaccctgcgtgatttactgactactaca
gctggcaagcttcgagtgggctccacagacgctggcattgcctttgctccagtgtattcg
atgggagcctcaagtggcaaaagtggacggactatgcctaacattcttgatgacatcatt
gcttcagttgttgaaaacaaaattccaccaaataaagctgccaagataaatgtaaaatca
gagcctaatgaagaccctaaagaaagccgaaaatctgccatgaatgaaagcaataaatta
tatagtgatataccacattcttggatctgtgaccagcatattatatggcttaaggattat
aagaatagtaataactggaaacttttcaaagagtgttggaaacaaggacagcctgcagtg
gtttccggtgtgcataagaaaatgaacatgagcttgtggaaggcagagtcaattagtctg
gattttggagaccaccaagctgatctcctgaactgcaaagacagcattatttcaaatgcc
aacgttaaggagttctgggatggttttgaagaaatttcaaaacggcagaaaaacaaaagt
ggagaaacagttgttttaaagttgaaagactgcccatctggagaagacttcaagaccatg
atgccagcaagatatgaagactttttgagaagtctgccgttgccagaatattgcaaccca
gaagggaagttcaatttggcctcccatttgccagggttttttgtgcgccctgatctagga
cccaggttgtgcagtgcctatggtgttgctgctgctaaggatcatgatataggaaccaca
aatctccacgttgaagcttctgatgttgtaaatattctggtctatgttggtgtagcaaaa
ggaaatggtgtcctctcaaaagcaggaatacttaagaaatttgaagaagaagaattggat
gatgttttaaggaaaagattaaaggattcgagtgaactgcctggtgctctgtggcatatt
tatgctggaaaagatcttgacaagataagggaatttcttcaaaagatttcaaaagaacaa
ggccttgaagttctgcctgagcatgatccaatccgggaccaaagctggtatgtgaataga
aagctccgccagaggctgcttgaggaacacggagtgagagcctgcactctgattcagttt
cttggtgatgccatcgttttgccagcaggaacacttcatcaggtacagaattttcacagc
tgtattcaggtaactgaagactttgtctccccagaacatcttgtacagtcattccactta
acacaggaactgaggcttttgaaagaggaaatcaattatgatgataaactacaggttaag
aatatcttatatcatgcagtcaaagagatggtgagaactttgaagatgcatgaagatgaa
gtagaggatatggaggacacttag
DBGET
integrated database retrieval system
