Arvicola amphibius (Eurasian water vole): 119824073
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Entry
119824073 CDS
T08327
Symbol
Dcaf13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aamp03009
]
119824073 (Dcaf13)
04121 Ubiquitin system [BR:
aamp04121
]
119824073 (Dcaf13)
Ribosome biogenesis [BR:
aamp03009
]
Eukaryotic type
90S particles
Other 90S particles
119824073 (Dcaf13)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
119824073 (Dcaf13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
ANAPC4_WD40
eIF2A
Beta-prop_IFT140_1st
NBCH_WD40
KNTC1_N
Beta-prop_NUP159_NUP214
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
119824073
NCBI-ProteinID:
XP_038200233
LinkDB
All DBs
Position
9:5004581..5034668
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AA seq
445 aa
AA seq
DB search
MKVKMLSRNPDNYVRETKLDIQRVPRNYDPTLHPFEVPREYIRALNATKLERVFAKPFLA
SLDGHRDGVNCLAKHPKSLTTVLSGACDGEVKIWNLTRRKCVRTIQAHEGFVRGICTRFC
GTSFFTVGDDKTVKQWKMAGPGCGEEEEPLQTILGKTVYTGIDHHWKDPVFATCGQQVDI
WDEQRTSPVCSMNWGFDSICSVKFNPIETFILGSCASDRNIVLYDMRQATPLKKVILDMR
TNTICWNPMEAFHFTAANEDYNLYTFDMRALDTPVQVHMDHVSAVLDVDYSPTGKEFVSA
SFDKSIRIFPVERSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANASEKL
GVLSSREKAANDYNQKLKEKFQYHPHVKRIARHRHLPKSIYTQIKEQRIMRESRRRKEMN
RRKHSKPGSVPVVSERKKHVVAVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaagatgctgagccggaaccccgacaactatgtgcgcgaaaccaagctggac
atacaaagagttccaagaaactatgatcctaccttacatccttttgaagtcccacgagaa
tatataagagctttaaatgctaccaaattggaacgagtgtttgcaaaaccattccttgcg
tccctggatggtcaccgtgatggagtcaattgcctagcaaagcatccgaagagcctgacg
acggtcctttctggggcatgtgatggagaggttaaaatttggaacctgactagacgaaaa
tgtgtccgaacgatacaagcacatgaaggctttgtgcgagggatatgcactcgcttttgt
gggacttcctttttcactgttggtgacgacaaaactgtgaagcagtggaagatggccggg
ccgggctgtggagaggaggaggagccactgcagaccatactaggaaagacagtgtacacc
ggcatcgaccatcactggaaagaccccgtcttcgctacctgcggacagcaagtagacatt
tgggacgaacaaagaaccagccccgtgtgctcaatgaactggggatttgacagtatatgc
agtgttaaatttaaccccattgagacatttatcctgggaagttgtgcttctgataggaat
atagtactgtatgatatgcggcaagccacgcctctgaagaaggttatcttggatatgaga
acaaatacaatctgttggaaccctatggaagctttccattttactgcagcaaatgaagat
tataacttgtatacctttgatatgcgtgccctggacacacctgttcaggtccacatggat
cacgtctctgcggtacttgacgtggactactcccccactgggaaagagtttgtgtctgcc
agtttcgataagtctatcagaatcttccctgtggagaggagccggagcagggaagtgtac
cacacaaagagaatgcagcacgttatctgtgtgaagtggacctccgacagcaagtacatc
atgtgcggctctgatgagatgaacatccgcctctggaaggctaacgcctcggagaagctg
ggcgtgctttcatcacgagaaaaggcagcaaatgattataaccagaagttaaaggaaaaa
tttcagtatcatccgcatgtgaaacggattgctcgccatcgacatctgccgaaatccatc
tacacccagatcaaggagcagcgcatcatgagggagtcccgtcgccgaaaggaaatgaat
cgtcgtaagcatagcaagcctggatctgtgccagttgtgtcagagaggaagaaacacgta
gtggcagttgtgaaataa
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