Arvicola amphibius (Eurasian water vole): 119824356
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Entry
119824356 CDS
T08327
Symbol
Stag3
Name
(RefSeq) cohesin subunit SA-3
KO
K13055
cohesin complex subunit SA-3
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
119824356 (Stag3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119824356 (Stag3)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Meiosis-specific proteins
Cohesin complex and associated proteins
119824356 (Stag3)
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
PDS5
Motif
Other DBs
NCBI-GeneID:
119824356
NCBI-ProteinID:
XP_041911780
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Position
10:complement(96143247..96177359)
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AA seq
1230 aa
AA seq
DB search
MPSLWSPSSDSTSSPSQKSVGSAQKGLSPCSPTSLSCDDGSSQDTAQRPSVSTSEDSDFE
DHSRRSVRKRAAKRPLRAAPVAKHQKKRSRIIPSGNDKNESVSPTNDLFDAVKAAKSDMQ
SLVDEWLENYKQDENAGFLELVNFFIRSCGCKSTVTPEMFRMMSNSEIIQHLTEQFNEDS
GDYPLTAPGPSWKKFQGSFCEFVKTLVYQCQYGLLYDGFPMDDLISLLIGLSDSQVRAFR
HTSTLAAMKLMTSLVRVALQLSLHKENNQRQYEAERNKGPEQRALERLESLLEKQKEFQE
NQEEIEGMMNAIFRGIFVHRYRDVLPEIRAICIEEIGYWMQSYSTSFLNDSYLKYIGWTL
HDKHKEVRLKCVKALEGLYSNQELSTRMELFTSRFKDRMVSMVMDKECEVAVEAIRLLTL
ILKNMEGVLTNADCEKIYSIVYISNRAMASSAGEFVYWKIFYPECEAKAVGGRERRRSSQ
AQRTFIHLLLAFFMESEHHSHAAYLVDSLWDCAQSHLKDWESLTSLLLRKDQNLGDMQER
MLIEILVSSARQAAEGHPPVGRITGKKGLTAKERKLQAYDKVKLAEHLIPFLPQLLAKFS
ADAENVAPLLRLLSYFDLSIYCTQRLEKHLELLLQQLQEVVVKHVEPEVLEAAARGLYLL
CKPEFTFFSRVDFARSQLVDLLTDRFQQELDDLMQSSFLDEDEVYSLTATLKRLSAFYNA
HDLTRWEIAEPCSRLLQKAVDTGEVPHQVVLPALSLVYFSILWTVTHISESTSQKQLMSL
KKRMVAFCELCQSCLSDVNPEIQEQAFVLLSDLLLIFSPQMIAGGRDFLRPLVFFPEATL
QSELASFLMDHVFLQPGELGSGQSQEDRVQIELLHQRRRLLAGFCKLLLYGVLELDAASD
VFKHYSKFYEDYGDIIKETLTRARQIDRCQCSRILLLSLKQLYTELMQEQGPQGLTELPA
FIEMRDLARRFALSFGPQQLHNRDLVVMLHKEGIKFSLSELPPADSSREPPNLAFLELLS
EFSPRLFYQDKQLLLSYLEKCLQRVSKARSRSWGPVTTYYHSLNPVENTAEASPQGPSHS
KKKRVEGSCRPQEEELSSQEESLQLNSSYPKPTLTSTAIKRRQSLRPVGKRQKARPGPGP
ELISSQQLSGTQRLKMSSTQYFQIQCDPSGSGLGKQLTQLSLMEEDEEEELGLLDGSCEE
WQGGDKLLHSPSPSEHGLDLLDTTELNVEG
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgcccagtctgtggtcaccctcctcagacagtacgtcttccccaagtcagaagtctgtg
ggaagtgcacagaagggcctgtctccttgttcccccaccagtctgtcctgtgatgatggg
agctcacaggatactgcacagcgtccctctgtgtcaactagtgaagacagtgactttgaa
gaccactcaagacgcagtgtgaggaagagagcagcgaaacgaccactcagagctgcccca
gtggcaaaacatcagaagaagcggtcccgaataatacctagtgggaatgacaagaatgaa
tcagtgtctccaaccaatgatctctttgatgctgtgaaagctgccaaaagtgacatgcag
tctttggtggatgaatggctagaaaactacaagcaagatgaaaatgcaggattcttggag
ctcgttaattttttcatccgatcctgtggatgtaaaagcactgtaactcctgagatgttc
aggatgatgtccaactcagagatcatccagcacctaacagaacagtttaatgaggactca
ggggactatcccctgacagctccaggcccatcctggaagaagttccagggaagcttctgt
gagtttgtgaagacattggtctatcagtgccagtacggcctcctctatgatggctttcct
atggatgatcttatttctctgctcattggcctctcagattcccaggtccgcgccttccgt
catactagtaccctggctgccatgaagctaatgacttctctagtaagagttgcactccaa
ttgagcctgcacaaagagaacaatcagcgtcagtatgaggctgaacgaaacaagggtcca
gagcagagagcactggagcgattggagagtctgctggagaaacaaaaagagttccaagag
aatcaagaagagatagaggggatgatgaatgctatcttcagaggtatttttgtccatcgg
tacagggatgtccttcctgagatccgtgctatctgcatcgaggagattgggtattggatg
caaagctacagcacctcctttcttaatgacagctacctaaaatacattggctggaccctg
catgataagcacaaggaagtccgcctaaagtgtgtgaaggctctggaagggctgtacagc
aaccaggagctgagtacacgcatggaactctttaccagccgtttcaaggaccggatggtt
tccatggtcatggacaaagagtgtgaagtggcagtggaggccatcaggttgctgaccctt
atactgaagaacatggagggagtactgaccaatgcagactgtgagaaaatctactccatt
gtgtacatttctaatcgtgctatggcctcttctgcaggggagtttgtgtactggaagatc
ttctatcctgagtgtgaggcaaaagcagtgggtggcagggagcgacgccggagttcacaa
gcccagaggactttcatccaccttctgctggccttctttatggagagtgagcatcacagc
catgctgcttacttggtagacagcttatgggactgtgcacagtctcatctgaaggactgg
gagagtctgacaagcctgctactgcggaaggaccagaatctgggtgatatgcaagagaga
atgctgatagaaatccttgtgtccagtgcccggcaagctgcggagggtcacccaccagtg
gggcgcatcacagggaagaagggtctgactgccaaagaacgcaaacttcaagcttatgac
aaggtgaagctggctgagcacctcatccccttcttaccccagctcctggccaagttctca
gcagatgcagagaatgttgcccccctgctccgactgcttagttactttgatctcagcatt
tattgcactcagcgcttggagaagcacttggagctgcttctgcaacaactccaggaggtg
gtggtgaagcatgtggagcctgaggtgcttgaggctgcagcacgtggcctctatctgctc
tgtaagccagagttcaccttcttcagcagagtggactttgcccgaagccagctagtggat
cttcttacggatagattccagcaggagcttgatgacctaatgcagtcatccttcctagat
gaggatgaggtgtacagtctgacagccactctgaagcgtctctctgcgttttacaatgct
catgacttgactcgctgggagatcgctgaaccatgttctcgactcctccagaaagctgtg
gacacgggagaagttcctcaccaggtggttttgccggccttgagtcttgtatatttttcc
attctatggacggtaacccacatttcagagtctacttcccaaaagcagctgatgagtttg
aagaaaagaatggtagccttctgtgaactttgccagagctgcctctcagatgtaaaccca
gagattcaggagcaggcttttgtcttactgagtgatttgcttctcatcttcagccctcag
atgattgcagggggacgggatttccttaggccccttgtcttttttccggaagctactctc
cagtcagaactagccagtttcctcatggatcacgtctttctccagcctggagaactgggc
agtggtcagtcccaagaggaccgtgtccagatagagctcctgcaccagcggcgccgcctg
ctggccgggttctgcaaactgctgctctacggggtgctggagctagacgcagcctcggac
gtcttcaaacactacagcaagttctatgaagactatggtgacattattaaggaaacatta
actcgagcaagacaaattgaccgttgtcagtgctctcggatcctgctcctgagcctaaag
cagctgtacacagaactgatgcaggagcaggggccccagggcctgacggaactgcctgcc
ttcatcgagatgagggacctggcccggagatttgccttgagctttggaccccagcagctt
cacaaccgagaccttgtggtcatgctacacaaggaaggcatcaagttctcattgtctgag
cttcctcctgctgactcttctcgtgagccgccaaatcttgcattcctggagctcctttca
gagttctccccccgcctcttctatcaggacaagcagttattactatcctatctggaaaag
tgtcttcagcgtgtctccaaggcacgtagccgttcctggggtccagttaccacctactac
cactccctcaaccctgtagagaacacagcagaggccagccctcagggaccctcccactca
aagaagaagcgtgttgaaggctcttgtaggcctcaggaagaagagctctcatcccaagaa
gaaagccttcaactgaacagtagctacccaaaacctaccctcacctccacagcaataaag
agaagacagtccctaaggccagtgggcaagaggcaaaaagctagaccaggaccaggacca
gagctgatcagcagtcagcaactctcaggcacccagaggttgaagatgtccagtacacag
tatttccagattcagtgtgatccttcaggctctggtttgggcaagcaactgacccaactc
agccttatggaagaggatgaagaagaagagctaggacttctggatggatcatgtgaagaa
tggcaaggtggagacaagctacttcatagcccttctcccagtgagcatgggctggaccta
ttagatactacagagctgaatgtggagggttag
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integrated database retrieval system
