Arvicola amphibius (Eurasian water vole): 119824626
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Entry
119824626 CDS
T08327
Symbol
Tnrc18
Name
(RefSeq) trinucleotide repeat-containing gene 18 protein isoform X1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAHCC1-like_Tudor
BAH
Tudor_3
Tudor_5
DUF4537
Motif
Other DBs
NCBI-GeneID:
119824626
NCBI-ProteinID:
XP_038200839
LinkDB
All DBs
Position
10:complement(101212693..101305340)
Genome browser
AA seq
2944 aa
AA seq
DB search
MDGRDFGPQRSVHGPPPPLLSGLAMDSHRVGAATAGRLPSSALPGPLPPGKYMAGLNLHP
HPGEAFLGSFVASGMGPSTPSQGSPVSLSSDLSFRSPTPSNLPMVQLWAAHAHEGFSHLP
SGLYPSYLHLNHLEPPSSGSPLLSQLSQPSIFDTQKDGFYLPAPGTVHSHSSSSRTPGGL
SSGGPAKGSSREGAGKDRSGRGGDPPPLFGKKDPRAREEVTVPRGVVDLTQEARAEGRQD
RGPSRLAECLSPFMAEAKAKGSLQPSALSLCNGAVDTGLVAELSRGGAKEVARQEESARL
LRRAEALLPTARPCGSPLPPPPPLPPKGPPAPPSSTPAGVYTVFREPGREHRVVAPTFVP
SVEAFDERVGPIQIASQARDARAREREPGRPGVLQGPPGSPRLERPEVLREKSSVIRSLK
RPPPSDGPPARSSRSSPDARTYLPPKELLKPEADPRPCERAPRGSSSSAAQQAAKFFGLE
PSRPPVPEHKWKPFELGNFATTQMAVLAAQHHHASRAEEEAAVATASKKAYLDPGGAMPR
ASATCGRPGADLHPAAHGPGEASAMQSLIKYSGSFAREAVAVRPGGGGKKSPFGGLGTMK
PEPAPTSAGPPRAQARLTHPGVPTAGGGRQLKRDPERPESAKTFGREGSAQGEAEVRHPP
VGIAVAVARQKDSGSSSRLAPGLADQERSLSLNNVKGHGRTDDDCDRARHREDRLLGTRL
DRDQEKLLRESKELADLARLHPTSCAPNGLNPNLMVTGGPTLAGSGRWSADPAAHLAAHP
WLPRSGSTSMWLAGHPYGLGPPSLHQGMAPAFPPGLGGSLSSAYQFVRDPQSGQLVVIPS
DHLPHFAELMERAAVPPLWPALYPPGRSPLHHAQQLQLFSQQHFLRQQELLYLQQQAAQA
LELQRSAQLVQERLKAQEHRTEMEEKVNKRGLETTGKTGLSAAGPGLLPRKPTAGSTGTH
GKAVSPPPSPRASPVTSLKAKVIQKVEDASKPPAYTYPATPSSHPSSPPPASPPPTPGLT
RKEEAPENVVEKKDLEVEKEAPSPFQALFTDIPPRYPFQALPPHYGRPYPFLLQPTAAAD
ADGLAPDVPLPADGPERLALSPEDKPICLSPSKIPEPPRDSPEEQPLVDREVKAEVEDVE
EGPTELPPLQSPLALPVPETMVAVNPAGGCGGGLLEAQALSTVGQGCREPSEASDFAQVA
EPQLELPGRTEPRMAALELGTQLTPEPLVETKEEPVEVPLDVPMEAPMAEAEPEDSLPQA
SLTEPQPSLELSDCDLPVPEGQCLNLEAQETAPAPGSTCYLEESCSESLPPGLEDPLAGM
NALAAAAELPQARPLPSLGAGVPAGEKVDAAPSLGLEHSFLQGITLLSEIAELELDRRGQ
EVAGTEPNLAVRPSLESLLAASSHMLKEVLDSPFSDPLKNLRLPRELSSNKKYSWMQKKE
ERMFAMKSSLEDMDALELDFRMRLAEVQRRYKEKQRELVKLQRRRDLGDRHEDAHRSMAR
RGPGRPRKRTHTPSALSPPCKRGKSHSGSGKLNSKSLLTPEDYDLGAGIRKRHKGPEEDQ
DALIGMAKARGRNQSWDDHESSSDFMSQLKIKKKKMASDQEQLASKLDRALSLTKQDKLK
SPFKFSDSPGGKPKASGGCGRFLTPYDSLLGKDRKALAKGLGLSLKPSREGKHKRAAKAR
KMEGGFKARGQPKSVHSPFASEVSSHSYNTDSDEDEDFLKNEWSTQGPSSSKLTSSLLCG
MVAKNSKPATGPKLTKRSLAGPRTLKPKAASSRKQPFCLLLREARSSFSDSSEEDSFDQD
DSSEEDEDEELEEEEEDEEETLGSYRLGAGEHALSPGLEESGLGLLARFAASALPSPIVG
PPLSVVQLEAEQKARKKEERQSLMGTEFEYTDSESEVKVPKQPPAGLLRPKKGVGEPGQS
MAAPVPGARASGSTSPDKTKLASEKGRKARKIRGPKEPGFEAGPEASDDDLWTRRRSERI
FLHDASAAVQAPSNTAPAPKPSRCGKGGAPSPRKDTGRAKDRKDPRKKKKGKEAGSAATL
PPARVPTLPDSRAPHTGPLATARRSKAKAKGKEAKKENRGKGGAVSKLMESMAAEEDFEP
NQDSSFSEDEHLPRGGATERPLTPAPRSCIIDKDELKDGLRVLIPMDDKLLYAGHVQTVH
SPDIYRVVVEGERGNRPHIYCLEQLLQEAIIDVRPASTRFLPQGTRIAAYWSQQYRCLYP
GTVVRGLLDLEDDRDLITVEFDDGDTGRIPLSHIRLLPPDYKIQCAEPSPALLVPSAKRR
SRKTSKDTGEGKEGATTGPQEATAGKARGRGRKPGAKAKSERAAVLEEGAATDEVPSAPL
ALEPINAPSSKKSPPEPVDKRARAPKARPVSAQPSPMPPTFSSCSAPEPFGELPAPAATP
LINMPVTMSATRPKPKKARAAEGSGAKGPRRPGEEDELLVKLDHEGVMSPKSKKAKEALL
LREDPGPGGWPESTGLLSLGSYPPAVGNGEPKAAWPNALEGDLTQEPGSGLPLEDPGNSN
SPDKTQAEQDGAEESETSSSSSSSSSSSSSSSSSSSSSSSSSGSETEGEEDTEKSREDSR
GAGGRTCSAASSRASSPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSTTDEDSSCSSDDEAAPAPAAGPSAQPVRPTKVSKPPSKARSSAHSPGKKAAPTAQPP
PQPPPQPQQTLQPKTQAGAGAKSRPKKREGVHLPTTKELAKRQRLPSVENRPKIAAFLPA
RQLWKWFGKPTQRRGMKGKARKLFYKAIVRGKEMIRIGDCAVFLSAGRPNLPYIGRIQSM
WESWGNNMVVRVKWFYHPEETSPGKQFHEGQHWDQKSGRSLPAALRASSQRKDFMERALY
QSSHVDENDVQTVSHKCLVVGLEQYEQMLKTKKYQDSEGLYYLAGTYEPTTGMIFSTDGV
PVLC
NT seq
8835 nt
NT seq
+upstream
nt +downstream
nt
atggatggccgagatttcgggccccagcggtccgtccacggccccccgccgccgctgctg
tccggcctggccatggacagtcaccgcgtgggcgcggccaccgccggacgcttgccctcc
tcggccttgccaggtcccctgccgcccgggaaatacatggccggtctcaatctgcacccg
cacccgggcgaggccttcttgggcagctttgtggccagcgggatggggccctcgaccccg
tctcagggaagcccggtatccctgtcctctgacctctccttccgctcccccacccccagc
aacctgcccatggtgcagctgtgggctgcccacgcccatgaaggcttctcccacctgccc
agcggactgtacccatcctacctccacctgaaccacctagagccccccagcagtgggagc
cccctcctcagccagctgagtcagcccagcatcttcgatacccagaaagatggcttctac
ctgcctgcgcctgggaccgtgcattctcactcatcctcctccagaactcccggtggcctc
tcctccggtggcccagccaaaggctcctcccgggaaggtgcagggaaggaccgctcaggc
cgcggtggagacccccctccgttgttcggcaagaaagaccctcgggcacgggaggaggtg
accgtgccccgtggggtggtggacttgacccaggaggcccgagccgagggccgccaggac
cgtgggccctcacgcctggctgagtgcctgtcaccctttatggcagaggccaaagcgaag
ggctctttgcagccatctgccctgagcctctgcaatggagccgtggacacagggctggtg
gccgaattgagccgtggaggtgccaaggaggtagccaggcaggaggaaagtgcccggctg
ctgcggcgggctgaagctctgctgcccacggccagaccctgtgggtctccactgccaccg
ccaccgccattgccccccaagggtccccctgcacccccttcctcgacacctgctggtgtc
tataccgtgttccgtgaaccaggccgtgagcaccgtgtggtggcacccacctttgtgcct
tctgtggaggcctttgatgagcgtgtgggacccatccagatagcatcccaggctcgcgat
gccagggccagagagcgcgagccaggccgtcctggagtcctgcagggtccccctggatct
ccacgactggagcgaccagaggtcctgcgggagaagagttctgtcatccgctccctcaag
cgtccacctccatccgacggacctccagcccgctcctcccggtcctccccagatgcccgc
acctacctgccccccaaggaactactcaagcctgaggccgatccgagaccttgtgagcgt
gcacctagaggctctagctcctctgctgcccagcaggctgccaagttctttggcctggaa
ccatcccgaccccctgtgccggaacacaagtggaaaccctttgagctgggcaactttgcc
accacgcagatggctgtcctggctgcccagcaccaccatgccagccgagcggaagaggaa
gcagctgtcgccacagcatccaaaaaggcctacctggaccccgggggtgcaatgccccgt
gcctcggccacctgcggcaggcctggtgctgacctccacccggcagcccacggacctgga
gaggcctctgccatgcagagcctcatcaaatacagtggtagttttgctcgggaggccgtg
gctgtgcgccctggtggcggtgggaagaagagcccttttggaggcctgggcaccatgaaa
cctgaacctgcacccacatctgcaggtccccccagagcccaggcccgacttacacacccc
ggggtccctacagctggagggggccggcagctgaaacgggacccagagagacccgagagc
gccaagaccttcgggcgggagggctccgcccagggggaagctgaagtgagacacccgcct
gtgggcattgccgtggctgtggcacgtcagaaggacagtgggagcagtagccgcctggcg
cctgggctggcagaccaggagcgctctctgtcactgaacaatgtcaaagggcatggccgg
actgatgatgactgtgatcgagccagacaccgggaggatcggctgctagggacacggctg
gaccgggaccaggagaagttgctccgagaaagcaaggagctggctgatttggcccgacta
caccccaccagctgtgctcctaacggtttgaaccccaacctcatggtaactgggggcccg
actctggcaggctcaggacgctggtctgctgaccccgcagctcacttggccgcacaccct
tggctgcctcgctcaggcagcacatccatgtggcttgctggacacccttatggcctcgga
cccccctctctacaccagggcatggcccctgccttcccacctggcttagggggctccttg
tcatcggcttaccagttcgtcagggatccccagtctggccagctagtggttatccctagc
gatcacctgcctcattttgctgagctgatggagcgagcggcggtgcctcctctctggccg
gccctgtacccgccgggccgcagccccctgcaccacgcccagcagctgcagctcttctcc
cagcagcactttctgcggcagcaagagctgctgtacctgcaacaacaggcggcccaggcc
ctggagcttcagcggagtgcacagctggtgcaggagcgattgaaagcccaggagcaccga
actgagatggaggagaaggtaaacaagaggggcctggagaccacaggcaagaccggcctg
agcgctgctggcccagggctgctgcctcgcaagcccactgccggctccacaggcacccac
ggcaaggctgtgagcccacccccgtctccccgagcctcccccgtgacctctctgaaggcc
aaggttatccagaaggtggaggatgcgtctaagccgccggcctacacctaccctgccaca
cctagctcacaccccagcagcccaccgcccgcctccccaccaccaacccctggcctcacc
cgcaaggaagaggctcccgagaacgtggtggagaagaaagacctggaggtggagaaggag
gcgcccagccccttccaggcccttttcacagatatcccccccaggtacccattccaagcc
ctgccaccacactatgggagaccctaccctttcctgctgcagcccactgcagctgctgac
gccgatggccttgccccggatgtgccacttccggctgatgggcctgagcgcctggcactg
tctcctgaagacaagcccatctgcctgtcaccttccaagatcccagagccaccccgggac
agcccagaggagcaaccgctggtcgaccgtgaggtgaaggctgaggttgaggatgtcgaa
gagggccccactgagctgcctcccctccagtcaccgttggctctgcctgtcccagagacc
atggttgctgtgaatcctgctggtggctgcggtggtggactgctggaggcccaggcatta
agcacagtgggtcagggctgccgggagccttctgaagcctcagactttgcacaagtggct
gaaccacagctagaactgccgggtaggacggagccccgcatggctgccctggagctgggg
acacagttgacacctgagccactggtggagactaaggaagagccagtggaggtgcccctg
gacgtgccaatggaagcgcccatggcagaggcagaacccgaggacagcctgccccaggcg
tccctgactgagcctcagcctagcctggagctctctgactgtgacttgcccgtcccagag
ggccagtgtctgaacctggaagctcaggagactgcacctgccccgggcagcacttgctat
ctagaggagagctgctctgaatcactccccccaggcctggaggacccgctggctggcatg
aatgcactggcagctgcagctgagctgcctcaggccaggcctctgccctctctgggtgct
ggggtcccagccggggagaaggtggacgctgcccccagcctaggcctggagcacagcttc
ctgcagggcatcaccctgctgagtgagatagccgagctggaactggaccgaaggggccag
gaggttgcaggtacagagccaaacctggctgtgcgaccttcgctggagagcctgctggcg
gccagcagccacatgctgaaggaggtgctagacagccccttctcggacccactcaagaac
ttgcggcttccgcgtgaattgagctccaacaagaaatacagctggatgcaaaagaaggaa
gaaaggatgtttgctatgaagtcgtccctggaagacatggatgccctggagctggacttc
cggatgcgcctggcagaggtgcagcggcggtacaaagagaaacagcgtgagctggtcaag
ctccagcgccgccgggatttgggggacaggcacgaggatgcccataggagcatggcacgc
agaggccctggcaggccgcggaaacggacccacaccccgagcgccctgtcgcccccctgc
aagagagggaagagccacagcggtagcggaaagctgaacagcaaatccctcctgacgcca
gaggactatgatctgggagcagggataaggaagagacacaaggggcctgaggaggaccaa
gatgccctcattggcatggcaaaagcccggggcaggaaccaaagctgggatgatcatgaa
tcctcctctgactttatgagtcagctaaagattaagaagaagaagatggcgagcgaccag
gagcagttggcaagcaagctagacagagccctctccctcacaaagcaagacaaactgaag
tcacccttcaagttttccgacagtcccgggggaaaaccgaaagctagtgggggctgtggc
aggttcttgacaccgtatgacagcctgctgggcaaggacagaaaagcgctggccaaaggc
cttggcttgtctctgaaaccctccagagaaggtaaacacaaaagggctgccaaagccagg
aagatggaggggggcttcaaggccagaggccagcccaagtctgtccattctccgtttgcc
tcggaagtgagcagccactcctacaatacggactcagacgaagatgaagacttcttgaag
aatgagtggtctacccaaggcccctccagctccaaactgacctcatccctcctgtgtggc
atggtggccaagaacagcaagccggccaccggccccaagctgaccaagaggagcctggcg
ggcccccggactttgaaacccaaggcggccagcagcaggaagcagcccttctgtttgctg
ctccgagaggcccgctcctccttcagcgactcttccgaggaggattcctttgatcaagat
gacagttcagaagaggatgaggatgaggagctggaggaggaggaagaagacgaagaggaa
acccttggtagctataggctgggtgctggggaacatgccctgtctccgggcctggaggag
agtggactgggcctgctggctcgctttgcggccagcgccctccccagccctattgtgggg
ccgcccctgtctgtggtgcagctggaagctgagcagaaggcccgcaagaaggaagaacgg
cagagcttaatgggtacggagttcgagtacacagactcagagagtgaagtcaaggttccc
aagcagccacccgctgggctgctgaggcccaagaagggagttggggagccaggccagtct
atggctgcccctgtacctggcgcccgggcctctggttccaccagcccagacaaaaccaag
ctggcctcagaaaagggacgcaaagcccggaaaatacgtggccccaaggaacccggcttt
gaggcagggccagaggccagtgatgatgacctgtggactcgacgccggagcgagcgtatc
ttcttgcacgatgcctcagccgccgtccaggcacccagcaacacggcacccgcacccaag
cccagccgctgtggcaagggtggtgccccaagcccgcgcaaagacaccggccgagccaag
gacaggaaggaccccaggaagaagaagaaagggaaagaggctgggtcagcagccacactg
ccaccagcccgggtgcccaccctgcccgactccagggcacctcacacagggcccctggcg
actgccagacggagcaaggctaaggccaaagggaaggaggcgaagaaggagaaccgagga
aaagggggtgcagtgagcaaacttatggagtccatggcagcagaggaggactttgaacca
aaccaggactcaagcttctctgaggatgagcacttgccccgaggtggggccacagagcga
cctttgaccccagcaccccgctcctgcatcattgacaaggacgagctgaaggacggcctg
cgcgtgctgatcccgatggacgacaagctgctgtacgcgggccacgtacagacggtgcac
tcaccggacatataccgcgtggtggtggaaggcgagcgtgggaaccgtccccacatctac
tgcctggagcagctgctgcaggaggcgattatagacgtgaggccggcctctacacgcttc
ttgccccaggggaccaggattgccgcctactggagccagcaataccgctgcctctatcca
ggcacggtggtccgagggctgctggacttggaagatgacagagacctgatcactgtggag
tttgatgacggggacacaggcaggattcccctctcacacatccgcctcttgccgcctgac
tacaaaatccagtgtgctgaaccttccccggcactcctagtgcccagtgcaaaacggcgt
agcaggaagactagcaaagacactggggaaggcaaagaaggggccaccacggggcctcag
gaggccacagcggggaaggccagagggcgaggacggaaacctggcgccaaagccaagagt
gagagagctgctgtgctggaggagggggcagccacggacgaggtccccagtgctcccttg
gccctggagcccatcaatgccccaagttccaagaagagtcccccggaaccagtggacaag
cgggccagagccccgaaagctcgcccagtctctgcacaacccagccccatgccacccacc
ttctccagctgctcagctcctgaaccctttggggagctaccagcccctgctgcaaccccg
ctcatcaatatgcctgttaccatgtctgccactcgccccaaacccaagaaggctcgggct
gccgaggggtcaggcgccaaaggtccccggaggccgggggaagaggatgaactgcttgtc
aaactggaccatgagggggtcatgtcccctaaaagcaagaaggccaaagaggccctgctc
ctgcgggaagatccagggcccgggggttggccggagtccacagggttgctcagcctgggt
agctacccaccagctgttggcaacggtgaacccaaggccgcctggcccaatgctctggag
ggagacctcactcaggagcccggatcagggcttccattagaggatcctggcaactccaat
agcccggacaagacccaggctgaacaagatggagctgaggagtcagagaccagcagcagc
agcagcagcagtagcagcagcagcagcagcagcagcagcagtagcagcagcagcagcagc
agcagcggttccgaaacagaaggcgaagaggacaccgagaagagcagggaggacagccgg
ggtgcagggggtcggacctgcagtgccgccagctccagggcatcctctcctgcctcctca
tcctcttcttcctcctcttcctcttcctcttcttcctcttcttcctcttcatcctcctcc
tcttcctcctcctcttcctcttcttcctcctcttcttcctcttcctcttcctcctcctcc
tcctcttccaccacagacgaggattcgtcctgcagctcagatgatgaagcagcccctgca
cccgcagcaggtccctccgcgcagccagtgcgccccaccaaggtgtccaagccacctagc
aaggcacgttcctcggctcactcccccgggaagaaggcagcccccaccgctcagccccca
ccccaacccccgccccagccccagcagactctgcaacccaagacccaggctggggctggg
gccaagagccgacccaagaagagagaaggtgtgcacctgcccaccaccaaggagctggcc
aagcggcagcgtctgccatctgtagagaacaggccgaaaatcgctgccttcctacccgcc
aggcagctttggaagtggtttggcaagcccacccagcggcgaggcatgaagggcaaggct
cgcaaactcttctacaaagccatcgtccgaggcaaggagatgatccgcatcggggactgc
gcggtcttcctctcggctggccgccccaacctgccctacattggccggatccagagcatg
tgggagtcttggggcaataacatggtggtccgcgtcaagtggttctaccatccagaagag
accagcccgggcaaacagttccacgagggccagcactgggaccagaagtcggggcgcagt
ctccccgcagccctgcgggcctccagccagaggaaggacttcatggagcgtgccctgtac
cagtcctcccatgtggatgagaacgacgttcagacagtgtcccacaagtgcctggtggtg
ggcctggagcagtacgagcagatgctgaagaccaagaaataccaggacagcgagggcctg
tactacctcgcgggcacctatgagcccaccacaggcatgatcttctccacggacggtgtg
cctgtactctgctga
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integrated database retrieval system
