Arvicola amphibius (Eurasian water vole): 119824708
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Entry
119824708 CDS
T08327
Symbol
Sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119824708 (Sbno1)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119824708 (Sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
119824708
NCBI-ProteinID:
XP_038201033
LinkDB
All DBs
Position
10:complement(82487469..82544258)
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AA seq
1392 aa
AA seq
DB search
MVEPGQDLLLAALSESGISPNDLFDVDGGDAGLTTPTPPSVQQSMPLSALELGLETEAAV
PVKQEPETMSTPALLNVRQQPPSTTTFVLNQINQLPTLGSTIVMTKTPPATTNRQTITLT
KFIQTTANTRPSVSAPAVRNALPPAPSKDQVQLKDLLKNNSLNELMKLKPPANIAQPVAT
AATDVSNGAVKKESSNKEVARIWINDMKMRSFSPTMKVPVVKEEDEPEEEDEEEMGHAET
YAEYMPIKLKIGLRHPDAVVETSSLSSVTPPDVWYKTSISEETIDNGWLSALQLEAVTYA
AQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAER
DLKDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQL
LHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGASE
PRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFTGV
TFKIEEVLLSQSYVKMYNKAVKLWVIARERFQQAADLIDAEQRMKKSMWGQFWSAHQRFF
KYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGVL
QSLIEKHFPAPDRKKLYSLLGIDLTAPSNNSSPRDSPCKENKIKKRKGEEITREAKKARK
VGGLTGSSSDDSESESDVSDHEESDYESSKNMSSGDDDDFNPFRDESSEDNEDDPWLIRK
DHKKNKDKKKKKSIDPDSIQSALLASGLGSKRPSFSSAPVISPAPNSAPANSNTNSNNSL
ITSQDAVERAQQMKKDLLDKLEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSND
DGSISYESRSEVDVPVEILNITEKQRFMDGKKNIAIISEAASSGISLQADRRAENQRRRV
HMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALTH
GDRRATESRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSPPPDYPGEFFKDVRQGLIG
VGLINVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFADTLTAVVQNAKKNGR
YDMGILDLGSGDEKVRKSDVKKFLTPGYSTSGHVELYTISVERGMSWEEATKIWAELTGP
DDGFYLSLQIRNNKKTAILVKEVNPKKRLFLIYRPNTGKQLKLEIYADLKKKYKKVVSED
ALVHWLDQYNSSADTCTHAYWRGNCKKASLGLVCEIGLRCRTYYVLCGSVLSVWTKVEGV
LASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLVNLLSTSDQSQQLAVQQKQLWQQ
HHPQSITNLSNS
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaccagggcaagatttactgcttgctgccttgagcgagagtgggattagtccg
aacgacctctttgatgttgatggtggagatgctgggctcacaactcctactcctccttca
gttcaacagtcgatgccacttagtgcattagaactaggtttggagacagaagcagcagtt
cctgttaaacaagaaccagagacaatgtctactcctgcactgttaaatgtgaggcagcag
cctccatccactacaacatttgtgctgaatcaaataaaccaacttccgaccttgggatct
acaattgtaatgactaaaacaccacctgcaacaaccaataggcaaaccatcactttgaca
aaatttatccagactacggcaaacacacgcccttcagtctcagcaccagcagtacgaaat
gccttgccccctgctccttcaaaagaccaggttcagttgaaggatttactgaaaaataat
agtctaaatgaactcatgaaactgaaaccacctgctaacattgctcaaccagttgcgact
gcagctactgatgtcagtaatggtgcagtaaaaaaagaatcttccaataaagaagtagca
agaatatggataaatgacatgaaaatgaggagtttttcccccaccatgaaggttcctgtt
gttaaagaggaggatgaaccagaagaagaagatgaggaagaaatgggtcatgcagagacc
tacgcagagtacatgccaataaaattaaaaattggcctgcgtcaccctgatgcagtagtg
gagactagttctttgtccagtgtcacacctcctgatgtttggtacaaaacctccatctct
gaagagaccattgataatggctggctctcagcattgcagcttgaggcggttacctacgca
gcacagcaacatgaaacattcctccctaatggagatcgtgctggcttcttaataggtgat
ggtgctggtgtgggcaaaggccggacgatagcggggatcatatatgagaactatttgctg
agtagaaagagagcactgtggtttagtgtatcaaatgacttaaaatatgatgcggaaaga
gatttaaaggatattggagcaaaaaacattttggtccattcattaaataagtttaaatat
ggaaaaatttcttccaaacacaatgggagtgtgaaaaagggtgttatttttgctacctat
tcttctcttattggtgaaagccagtctggtggtaaatataagaccaggttaaaacagctt
ctgcattggtgcggtgatgacttcgatggagtgatagtgtttgatgaatgtcacaaagca
aaaaacctctgtcctgttggttcttcaaagccaaccaagacagggttggccgttttagag
cttcagaacaagttgccaaaagccagagttgtttatgccagtgccactggtgcttcggaa
ccacggaacatggcttatatgaatcgtcttggaatttggggtgagggaactccattcaga
gaattcagtgattttatccaagcagtggaacgcagaggtgttggtgccatggaaatagtt
gctatggatatgaagcttagaggaatgtacattgcacgacagctgagctttactggagtg
accttcaaaatagaggaagttcttctttctcagagttatgttaaaatgtataacaaagca
gtcaagctgtgggtcattgctagagagcgatttcagcaagctgcagatttgattgatgct
gaacagagaatgaagaaatctatgtggggtcaattctggtctgctcaccagaggtttttt
aagtacctgtgcatagcatccaaagtgaaaagggtagttcaactggctcgggaggaaatc
aagaatgggaagtgtgtggtaattggtctgcagtctacaggagaagctagaactctggaa
gccttggaagagggtggaggagaactaaatgattttgtttcaactgccaaaggggtattg
cagtcactcattgaaaaacactttcctgctccagacaggaagaaactttatagtttgcta
ggaatcgatttgacagctccaagtaacaacagttcaccaagagatagcccttgtaaagaa
aacaaaataaagaagcggaaaggtgaagaaataactcgagaagccaaaaaagcacgaaaa
gttggtggccttactggtagcagctctgatgacagcgaaagtgagtctgatgtctctgac
catgaagaaagtgactatgagagctctaagaacatgagctctggtgatgacgatgatttc
aaccccttcagagatgagtccagtgaggacaacgaggacgatccttggttaatcagaaaa
gaccacaagaaaaacaaagataagaaaaaaaagaaaagtatagatccagattccattcaa
agtgccttgttagcatcaggtcttggttcaaagcggcctagtttctcctctgcaccagtc
atctcacctgctcccaacagtgcaccagctaacagtaacaccaacagtaacaatagcctt
ataacaagtcaggatgctgtggaaagggcacagcagatgaagaaagacctgcttgataaa
ctagaaaaattagctgaagacctccctcctaacaccttggatgaacttattgatgaactt
ggtggtcctgaaaatgtggctgagatgactggccgcaaggggcgggtggtgagcaatgac
gatggaagcatatcatatgagtcaaggtctgaagttgatgtgcctgtggaaattctgaac
atcacggagaagcagaggtttatggatggaaaaaagaatattgctattatctcagaagct
gccagctcaggtatttcattacaagcagatcggagagctgaaaatcaaaggcgaagagtt
cacatgactttggagttaccctggagtgctgatagggcaattcagcaatttggaagaaca
cacaggtcaaaccaagtaactgctccagagtatgtctttttgatttcggaactggctgga
gagcagagatttgcatctattgttgctaagagactcgagagtttgggggcacttacccat
ggtgacagaagagcaacagagtctagagatttgagcaggttcaactttgacaataagtat
ggaagaaatgctttggaaattgttatgaaatccattgtaaacttggattctcctatggta
tcaccacctccagactaccccggagaattctttaaagatgttcggcaaggactgatagga
gtgggcctgattaatgttgaagatcggtcaggaattcttactcttgataaagactataac
aatataggaaaattcttaaacagaattctgggcatggaggtacatcagcagaatgcgttg
tttcagtattttgcagacacgcttactgcagttgttcagaatgccaagaagaatggaaga
tatgacatgggaatcctagatctgggttctggagatgagaaggtgaggaagagtgatgta
aagaagtttctgaccccaggatactccacctctggccacgtagagctatacacaattagt
gtggagaggggaatgtcttgggaggaagcaaccaagatttgggcagagctgacaggacca
gatgatggcttttacttatcactgcaaataagaaacaacaaaaagactgcaatcttggtt
aaagaagtaaaccctaagaagagactatttttaatttaccgaccaaacactgggaaacaa
ctcaaattagaaatttatgctgatctgaaaaagaaatataagaaggtagtctccgaagat
gccctggtacactggctggatcagtataattcctctgcagacacctgcactcatgcatac
tggcgtggcaattgtaaaaaagcaagtttaggattggtatgtgagataggtctccgctgc
cgcacatactatgtgttatgtggctcagttctgagcgtctggacaaaagtggagggagtt
ctggcctctgtcagtggcacaaatgtgaaaatgcagatagtgcggctaagaacagaagat
ggacagcggattgtaggtttgatcattccagcaaattgtgtgtctcctcttgtaaatctc
ctgtcaacttcagaccagtctcagcagctggcggtccaacaaaaacagctgtggcagcag
catcacccacagagcatcaccaacttgagcaactcgtaa
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