Arvicola amphibius (Eurasian water vole): 119824769
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Entry
119824769 CDS
T08327
Symbol
Hmgb1
Name
(RefSeq) high mobility group protein B1 isoform X1
KO
K10802
high mobility group protein B1
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03410
Base excision repair
aamp04140
Autophagy - animal
aamp04217
Necroptosis
aamp04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119824769 (Hmgb1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119824769 (Hmgb1)
09143 Cell growth and death
04217 Necroptosis
119824769 (Hmgb1)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
119824769 (Hmgb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119824769 (Hmgb1)
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119824769 (Hmgb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aamp04147
]
119824769 (Hmgb1)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
119824769 (Hmgb1)
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
119824769 (Hmgb1)
MMR (mismatch excision repair)
Other MMR factors
119824769 (Hmgb1)
Exosome [BR:
aamp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
119824769 (Hmgb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
RNA_pol_3_Rpc31
NOA36
HMG_box_5
Nop14
Motif
Other DBs
NCBI-GeneID:
119824769
NCBI-ProteinID:
XP_038201151
LinkDB
All DBs
Position
10:107778520..107784114
Genome browser
AA seq
233 aa
AA seq
DB search
MVSWTLQKFTHGQENQLNMGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFS
KKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAF
FLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAY
RAKGKPDAAKKGAVKAEKSKKKKEEEDDEEDEEDEEEEEEEEDEDEEEDDDDE
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggtttcttggacgctgcaaaaattcactcatggacaggaaaatcaactaaacatgggc
aaaggagatcctaagaagccgagaggcaaaatgtcctcgtatgcattctttgtgcaaact
tgccgggaggaacacaagaagaagcacccagatgcttctgtcaacttctcagagttctct
aagaagtgctcagaaaggtggaagaccatgtctgctaaagaaaaggggaaatttgaagac
atggccaaggctgacaaggctcgttatgaaagagaaatgaaaacctacatcccccccaaa
ggggagaccaaaaagaagttcaaggaccccaatgcacccaagaggcctccttcggccttc
ttcttgttctgttctgagtatcgccccaaaatcaaaggagagcaccctggcttatccatt
ggagatgttgcaaagaagctgggagagatgtggaacaacactgctgcagatgacaagcag
ccctacgagaagaaggctgccaagctgaaggagaagtacgaaaaggatattgctgcctac
agagctaaaggaaaacccgatgcagcgaagaagggggcagtcaaggcagaaaagagcaag
aaaaagaaggaagaggaagatgatgaggaggacgaagaggatgaagaggaggaggaagaa
gaggaagatgaagatgaggaagaagatgatgatgatgaataa
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integrated database retrieval system
