Arvicola amphibius (Eurasian water vole): 119824777
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Entry
119824777 CDS
T08327
Symbol
Smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04120
Ubiquitin mediated proteolysis
aamp04137
Mitophagy - animal
aamp04144
Endocytosis
aamp04340
Hedgehog signaling pathway
aamp04350
TGF-beta signaling pathway
aamp04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119824777 (Smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119824777 (Smurf1)
04350 TGF-beta signaling pathway
119824777 (Smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119824777 (Smurf1)
04137 Mitophagy - animal
119824777 (Smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
119824777 (Smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119824777 (Smurf1)
04121 Ubiquitin system [BR:
aamp04121
]
119824777 (Smurf1)
03029 Mitochondrial biogenesis [BR:
aamp03029
]
119824777 (Smurf1)
Enzymes [BR:
aamp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119824777 (Smurf1)
Membrane trafficking [BR:
aamp04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
119824777 (Smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
119824777 (Smurf1)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
HECT type E3
119824777 (Smurf1)
Mitochondrial biogenesis [BR:
aamp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
119824777 (Smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
119824777
NCBI-ProteinID:
XP_038201159
LinkDB
All DBs
Position
10:complement(103347237..103444803)
Genome browser
AA seq
731 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDP
KWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPSDTDAVRGQIVVSLQTRDRIGSGGSVVDCRGLLENEGTVYEDSGPGRPLSCLMEEPA
PYSDGTGAAAGGGNCRFVESPNQDQRLQVQRLRNAEVRGSLQTPQNRPHGHQSPELPEGY
EQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVD
HNNRTTQFTDPRLHHIMNHQCQLKEPSQPLQLPSEGSMEDEELPAQRYERDLVQKLKVLR
HELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVARE
WLYLLCHEMLNPYYGLFQYSTDDIYTLQINPDSSVNPDHLSYFHFVGRIMGLAVFHGHYI
NGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
ELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTR
VPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
AVEETCGFAVE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccccgggacgcggaggaacggctccagcatcaagatccgtctgacagtatta
tgtgccaagaaccttgcaaagaaagacttcttcagactccctgacccctttgccaagatt
gttgtagatggctctgggcagtgccactcaaccgacactgtgaaaaacaccttggaccca
aagtggaaccagcattatgacttgtacgttgggaaaaccgactccatcaccatcagtgtg
tggaaccacaagaagatccacaagaagcagggggccggcttcctgggctgtgtgcgactg
ctctccaacgccatcagcagattgaaagacactggctaccagcgtttggatctatgcaaa
ctaaatccctcagatactgatgcggtccgtggccaaatagtggtcagtttacagacccga
gacagaataggcagtggagggtcggtggtggactgcagaggattgctagaaaatgaagga
acagtgtatgaagactcaggccctggaaggccgctcagctgcctcatggaggaacctgcc
ccatattcagatggtaccggtgcagctgcgggaggtgggaactgcaggtttgtggagtct
ccaaaccaagaccagagactccaggtacagcgactccgaaacgctgaggttcgagggtcc
ctgcagacaccccagaaccgaccacatggccaccagtctccggagctgcctgaaggctat
gagcaaaggacgacagtacagggacaagtgtactttttgcacacgcagactggagtcagc
acgtggcatgatcccaggatccccagagaccttaacagtgtgaactgcgatgaacttggg
ccgctgcctccaggctgggaagtcagaagtacagtgtcgggaagaatctattttgtagat
cacaataataggacaacccagtttacagacccacggcttcaccatatcatgaatcaccag
tgccaacttaaggagcccagccagccgctgcagttgcccagcgagggctccatggaggac
gaggagcttcctgcccagagatatgagagagatttagtccagaagctcaaagttcttaga
cacgaactctctcttcagcagccccaagctggtcattgtcgaatagaagtttccagagaa
gaaatatttgaggagtcgtatcgccagatcatgaagatgcggccgaaagacctgaagaag
cgcctgatggtgaagttccgaggggaggaaggcttggactacggtggagtggcacgagag
tggctgtatttgctgtgccatgaaatgttgaatccgtattatgggctcttccagtactcc
acagacgacatctacacgctgcaaatcaacccggactcttccgtcaaccccgaccatctg
tcttacttccactttgtgggtcgcatcatgggtctggctgtgttccatggacactacata
aatgggggcttcacagttccgttctacaagcagctcctgggaaaacccatccagctgtcg
gatctggagtcagtggacccagaactgcacaagagcttggtgtggattctagagaatgac
atcacgccggtgctggaccacaccttctgcgtggagcacaatgcttttgggcggatcctt
cagcatgaactgaaacccaatggcagaaatgtgcctgtcactgaggagaacaagaaggaa
tatgtccggttgtatgtaaactggaggtttatgagaggaattgaagcccagttcctagcg
cttcagaaagggtttaatgaactcattccccaacacttactgaagccctttgaccagaag
gaactagagctgataataggcgggctggataagatagacctgaatgactggaagtccaac
acgcgtctgaagcattgtgtggccgacagcaacatcgtcagatggttctggcaggcagtg
gagaccttcgatgaggagaggagggccagactcctgcagttcgtgacaggatccacgcga
gtgcctctccaaggcttcaaggcgctgcaaggttctacaggcgcggcagggccccgactc
ttcaccatccacctgatagatgccaacacagacaacttacccaaggctcatacctgcttt
aaccggattgacatcccaccctatgagtcctatgagaagctctacgagaagctgctgaca
gcagtggaggagacctgtggctttgctgtggagtga
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integrated database retrieval system
