Arvicola amphibius (Eurasian water vole): 119824779
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Entry
119824779 CDS
T08327
Symbol
Col8a1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
119824779 (Col8a1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
119824779
NCBI-ProteinID:
XP_038201164
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Position
10:37429330..37563894
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AA seq
745 aa
AA seq
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MAVPPRPQQLLGVLLTISLSSVRLTQAGAYYGIKPLPPQIPPQIPPQIPQYQPLGQQVPH
MPLGKDGLSMGKEMPHMQYGKEYPHLPQYMKEIQPVPRMGKEVVPKKGKGEIPLASLRGE
QGPRGEPGPRGPPGPPGLPGHGMPGIKGKPGPQGYPGIGKPGMPGMPGKPGAMGMPGAKG
EIGPKGEVGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGAKGERGPKGPPGPPGLQGP
KGEKGFGMPGLPGLKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGPPGEPGPQG
LIGVPGVQGPPGMPGVGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGVGKPGFPGPK
GDRGIGGVPGALGPRGEKGPAGAPGVGGPPGEPGLPGMPGPMGPPGAIGFPGPKGEGGVA
GPQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGHKGLPGLPGVPGLL
GPKGEPGIPGDQGLQGPPGIPGIVGPSGPIGPPGIPGPKGEPGLPGPPGFPGVGKPGVAG
LHGPPGKPGALGPQGQPGLPGPPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDGVKPPH
AYAGKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFDKLLYNGRQNYNPQTASFTCEVPG
VYYFAYHVHCKGGNVWVALFKNNEPXMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQMP
SEQAAGLYAGQYVHSSFSGYLLYPM
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgccacccaggcctcaacagctgctgggagtgctgctcaccatttcactgagc
tccgtcaggctcactcaggctggtgcctactatggaatcaagccgctgccacctcaaatt
cctcctcagataccaccgcaaattccacaataccagcccctgggccagcaagtacctcac
atgcctttgggcaaagatggcctttctatgggcaaggagatgcctcacatgcagtatggc
aaagagtacccacaccttccccagtatatgaaggaaatccaacctgtgccaagaatgggc
aaggaggtggtacccaagaaaggcaaaggagaaatacctttagccagtttgcgaggagaa
caaggtccccgtggagaacctggaccaagaggaccaccggggccaccaggtttgccaggt
catggaatgcctggaatcaaaggaaaaccagggccacaaggatatccaggaattggaaag
ccggggatgcctgggatgcctggaaagccaggagccatgggaatgcctggagccaaaggt
gaaattggacccaaaggggaagtcgggcctatgggaatcccaggaccacaaggacctcca
ggacctcatggacttcctggcatcgggaaaccgggtgggccagggttaccagggcaacct
ggagcaaaaggtgaaagagggcccaaaggaccaccaggacctccgggtcttcagggtccc
aaaggagagaagggcttcgggatgccaggcttgccgggtctgaagggtcctccaggtatg
catggccctcctggcccagttgggctgccaggagtaggaaaaccaggagtaacaggcttt
cctggaccccagggtcccctggggaagccaggccctccaggggaacctggaccacaaggt
cttattggtgtgccaggagttcaaggacctcccgggatgcctggagttggaaaaccgggc
caggatggaatccctggacagccaggatttccaggtggtaaaggggagcaaggactgcca
gggttgcctggacccccaggactcccaggggttggaaagccaggcttcccaggacccaaa
ggggaccggggcattgggggtgttcctggggctcttggaccaagaggggagaaaggaccg
gcaggtgctcctggagtgggaggtcctcctggagaaccaggcctacccggaatgccaggg
cccatgggcccaccaggtgctattggcttccctgggcccaaaggagaaggtggggtggcg
ggaccacagggtccaccaggtcctaagggtgagccaggcctccaaggctttcctgggaag
ccaggttttcttggtgaagtaggtccccctggcatgaggggtttgcctggtcctattgga
cccaagggagaagctggtcacaaagggttgccagggcttcctggagttccggggctgctt
gggcccaagggagaaccaggcatacccggggatcagggtctacagggacccccaggcatt
ccagggattgtaggacctagtggccctattggaccacctgggattccgggccccaaagga
gaaccaggcctcccaggcccccctggatttcctggtgtagggaagccaggagtggcaggc
cttcacggccccccagggaaacctggtgcccttgggcctcagggccagcctggtcttcct
gggcccccaggccctccagggcccccaggacccccagctgtgatgccccctacaccacca
ccccagggagaatatctgccagatatgggactaggaattgatggagtgaaacctccacat
gcctatgcgggcaagaagggcaagaacggtgggccagcctatgagatgcctgcttttact
gcagagctgactgcacctttcccaccggtgggggccccagtaaagtttgacaagctgctc
tacaatggcagacagaactacaacccgcagacggcatctttcacctgtgaagtcccgggt
gtctactactttgcttaccatgttcactgcaagggaggcaacgtgtgggttgctctcttc
aagaacaacgagccantgatgtacacatacgacgagtacaagaagggctttctggaccag
gcttccgggagtgcagtactgctcctccggcccggagaccgggtcttcctccaaatgccc
tcagaacaggcggccggactgtacgccgggcaatatgtccactcctccttttcaggatat
ttattgtatcccatgtaa
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