Arvicola amphibius (Eurasian water vole): 119824969
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Entry
119824969 CDS
T08327
Symbol
Stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119824969 (Stxbp5l)
Membrane trafficking [BR:
aamp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119824969 (Stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
119824969 (Stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_WDR5
WD40
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_VPS8
EIF3I
Beta-prop_WDR90_POC16_2nd
Lgl_C
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Synaptobrevin
Beta-prop_EML
Beta-prop_NUP159_NUP214
RAB3GAP2_N
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
119824969
NCBI-ProteinID:
XP_038201486
LinkDB
All DBs
Position
10:complement(38698039..38895744)
Genome browser
AA seq
1185 aa
AA seq
DB search
MKKFNFRKVLDGLTASSPGSGSSSGSNSGGAGSGSVHPGGTAGVLREEIQESLTSDYFQI
CKTVRHGFPYQPTALAFDPVQKILAIGTRTGAIRILGRPGVDCHCQHESAAAVLQLQFLI
NEGALVSASSDDTLHLWNLRQKRPAILHSLKFNRERITYCHLPFQSKWLYVGTERGNTHI
VNIESFILSGYVIMWNKAIELSTKTHPGPVVHLSDSPRDEGKLLIGYENGTVVFWDLKSK
RAELRVYYDEAIHSIDWHHEGKQFMCSHSDGSLTLWNLKSPSRPFQTTVPHGKSQREGRK
SEPCKPILKVEYKTCRNSEPFIIFSGGLSYDKACRRPSLTIMHGKAITVLEMDHPIVEFL
TLCETPYPNEFQEPYAVAVLLEKDLIVVDLTQTNFPIFENPYPMDIHESPVTCTAYFADC
PPDLILVLYSIGVKHKKQGYSNKEWPVSGGAWNLGAQTYPEIIITGHADGSIKFWDASAM
TLQMLYKLKTSKVFEKQKVGDGKQACEIVEEDPFAVQMVYWCPESRIFCVSGVSAYVIIY
KFSRHEITTEIVSLEVRLQCDVEDIITPEPETSPPFPDLSSQLPSSRSLSGSTNTVSSEG
VTKDSIPCLSVKTRPVRMPPGYQADLVIQLVWVDGEPPQQITSLAVSSAYGIVAFGNCTG
LVVVDFIQKTVLLSMGTIDLYRSSDLYQRQPRSPRKNKQFIADNFCMRGLSNFYPDLTKR
IRTSYQSLTELNDSPVPLELERCKSPTSDHVNGHCTSPTSQSCSSGKRLSSADVSKVNRW
GPGRPPFRKAQSAACMEISLPVTTEEARENSYNRSRSSSISSIDKDSKEAVTALYFMESF
ARKNDTTVSPCLFVGTSLGMVLVISLNLPSSDEQRFTEPVMVLPSGTLLSLKGAVLTFSC
MDRTGSLMQPPYEVWRDPNNADENEKTWKRKLVMNYSNAPQETGDHQYAVICSEKQAKVF
SLPSQTCLYVHNITEASFILQAEVVVMCNSACLACFCANGHIMIMSLPSLRPMLDVNYLP
LTDMRIARTFCFTNEGQALYLVSPTEIQRLTYSQEMCDNIQDMLGDLFTPIETPEAQNRG
FLKGLFGGSGQTFDREELFGEATAGKASRSLAQHIPGPGSIEGMKGAAGGVMGELTRARI
ALDERGQRLGELEEKTAGMMTSAEAFSKHAHELMLKYKDKKWYQF
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaatttccgaaaagttttggatggtttaactgcctcttcccctggcagt
ggcagcagcagtggcagtaacagcggtggggctggaagtggctccgtgcatccaggaggg
actgcaggggttctcagagaggagattcaggaaagcctgacttcagactatttccagatt
tgcaagacagttcggcatggttttccttatcagcccacagcactggcctttgatccagtc
cagaaaatcttggctattggtacaagaacaggtgctatacgaatacttgggaggcctggt
gttgactgccactgccagcatgaaagtgctgcagctgtcttgcagctccagttcctgatc
aatgagggtgctttggttagtgcaagttcagatgacacacttcatttgtggaatctgaga
cagaagaggccagccattcttcattcacttaagtttaacagagaacgaattacttactgt
catctacctttccagagtaaatggctctatgttgggacagaaagaggaaatacacatatt
gtaaatattgagtctttcattctttccggatatgtcatcatgtggaacaaagcaattgaa
ctatccaccaagactcatccaggcccagttgttcatttaagtgatagcccaagagatgaa
gggaagcttttaataggttatgaaaatggtactgtagtattctgggacttgaaatctaaa
agagcagaactgagagtttattatgatgaggctattcattcaattgattggcatcatgag
ggcaaacaattcatgtgcagccattcggatggtagcttgactttatggaacctgaaaagc
ccaagtcgccctttccaaaccacagttccacatggaaaaagtcaaagagaaggaagaaag
tctgagccttgtaaaccaattcttaaagtagagtacaaaacttgcaggaacagtgaacca
tttataatattctctggtgggctgtcatatgacaaagcttgcagaagaccaagtttaacc
atcatgcatggaaaagcaattacagtacttgaaatggatcatcctattgttgaatttcta
actttatgtgaaacaccttatccaaatgaatttcaagaaccctatgctgttgctgtgctt
ctagagaaagatctcatcgtagttgatctgacacaaaccaattttccaatctttgaaaat
ccatacccaatggacattcatgagtcaccagtcacatgcacagcatattttgccgattgc
cctccagatttgattctagtactctattctataggagtcaagcataaaaagcaaggatac
agtaataaggaatggccagtcagtggaggagcttggaatcttggagcacaaacttaccca
gaaatcattattactggtcatgctgatggatcaataaaattttgggatgcctctgcaatg
actctgcagatgttgtacaagttaaaaacttcaaaagtatttgaaaagcagaaggtagga
gatggcaaacaagcgtgtgaaattgtagaggaagatccatttgctgtgcagatggtttac
tggtgtccagagagcagaatattttgtgtatcaggagtctctgcgtatgtcataatttat
aaattcagcagacatgaaattacaacagaaattgtgtcactagaggtacgacttcagtgt
gatgttgaagacattatcacccccgagccagaaacaagtcctccatttccagatctctcc
tctcaactcccctcttcaaggagtctttccggaagcaccaatactgtgtctagtgaaggg
gtgacgaaggacagcattccgtgcctcagtgttaaaacacggccagtgcggatgccgcca
ggttatcaagcagatcttgttattcagttggtgtgggtcgatggtgagcctcctcagcag
attaccagccttgctgtaagctcagcatacggaatagttgcatttggaaactgcactggg
ttggttgtggtggatttcatacagaagactgtactattaagtatgggaacaattgacctc
tatcgatcaagtgacctgtaccagcgacagccccggtctcctcgaaaaaacaagcagttc
attgcagacaacttttgcatgcgtgggctgtctaacttttatcctgatttaacgaaacgg
atccgtacttcctatcagagcttaacagagctgaatgatagtccagttcccctggagctt
gagcgctgcaagtctcccacttcagaccatgtaaatggacactgcacaagtccaacctct
cagagttgcagttctggaaaacgtctttccagtgctgatgtttcaaaagtaaatcgctgg
ggtcctggaagaccaccatttagaaaggcacagtcagctgcttgcatggagatttcttta
ccagttacaactgaagaagccagagagaattcctataaccgctccaggagctccagcatc
tccagtatcgacaaagactccaaagaagcagttacagctttatacttcatggaatccttt
gcacggaagaacgacaccaccgtttcgccttgtctgtttgttggaactagtctgggaatg
gtattagtcatctccctgaacctgccatcatcagacgaacaaaggtttacagagccagtg
atggtattgccaagcggaacactcctctcactgaagggagctgtgctaacgttttcctgc
atggacagaactggcagcttaatgcagcctccgtatgaagtttggagggacccgaacaac
gcagacgaaaatgagaaaacgtggaagcggaaactggttatgaactactccaatgcaccc
caggaaacaggcgaccatcagtatgcagtaatctgctcggagaaacaagccaaagtcttc
tcgctgccgtctcagacctgcctttacgttcataacatcacagaggcctctttcatactg
caagcagaggtggtcgtcatgtgtaacagtgcctgcttggcctgcttttgtgcaaacggg
catatcatgataatgagcttacctagccttcgcccaatgttggatgtaaattatttgcca
ctgacagacatgaggatagcacggacattttgttttactaatgaaggccaagcattatac
cttgtctctcctactgaaattcaacggttaacatatagccaagaaatgtgtgataatatt
caggacatgttaggcgatttgtttactcccatagagacaccggaagctcaaaatagaggc
tttctcaagggactgtttggtggaagtggacagacatttgacagagaggagctgtttggg
gaagctacagcggggaaagcatcccgcagcctggcacagcacattcccggaccaggtagt
atagaagggatgaaaggcgcggctggaggggtgatgggagagctgacccgagcccgaatt
gcacttgatgagagaggacagaggctgggtgagctggaagagaagaccgcaggcatgatg
accagtgcagaagcgttttccaagcacgcacatgagttaatgctgaaatacaaagataag
aaatggtaccagttctaa
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integrated database retrieval system
