Arvicola amphibius (Eurasian water vole): 119825026
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Entry
119825026 CDS
T08327
Symbol
Ttc28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aamp03037
]
119825026 (Ttc28)
Cilium and associated proteins [BR:
aamp03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
119825026 (Ttc28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TPR_10
TPR_MalT
TPR_14
Rapsyn_N
RPN7
TPR_16
TPR_17
TPR_19
TPR_9
TPR_11
TPR_6
TPR_NPHP3
ANAPC5
OrgC
T4SS
Motif
Other DBs
NCBI-GeneID:
119825026
NCBI-ProteinID:
XP_038201555
LinkDB
All DBs
Position
10:complement(124276524..124766108)
Genome browser
AA seq
2462 aa
AA seq
DB search
MEQPLTLAPEPGSARSRRRREPESPPAPIPLFGAKTIVQRSPDEPALSKAEFIEKVRQSN
QACHDGDFHTAIVLYNEALAVDPQNCILYSNRSAAYMKTQQYHKALDDAIKARLLNPKWP
KAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPMRDTLEPTYQQL
QKMKLDKSPFVVVSVVGQELLTAGHHGASVVVLEAALKIGTCSLKLRGSVFSALSSAHWS
LGNTEKSTGYMQQDLDVAKTLGDHTGECRAHGNLGSAFFSKGNYREALTNHRHQLVLAMK
LKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDELSEARELGNMGAVYIA
MGDFENAVQCHEQHLRIAKDLGSKREEARAYSNLGSAYHYRRNFDKAMSYHNCVLELAQE
LMEKSIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIAEDLKDRAAEGRASSNLGIIHQM
KGDYDTALKLHKSHLCIAQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQISME
VNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALSNLGNFHCS
RGEYVQAAPYYEQYLRLAPDLQDMEGEGKVCHNLGYAHYCLGNYQEAVKYYEQDLALAKD
LHDKLSQAKAYCNLGLAFKALLNFAKAEECQKYLLSLAQSLDNSQAKFRALGNLGDIFVC
KKDVNGAIKFYEQQLGLAHHVKDRRLEASAYAALGTAYRMIQKYDKALGYHTQELEVYQE
LSDLPGECRAHGHLAAVYMALGKYTMAFKCYQEQLELGRKLKEPSLEAQVYGNMGITKMN
MNVMEDAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDYEEAIKYYEQYLSV
AQSLNRMQDQAKAYRGLGNGHRATGSLQQALVCFEKRLVVAHELGEASNKAQAYGELGSL
HSQLGNYEQAISCLERQLNIARDMKDRALESDAACGLGGVYQQMGEYDTALQYHQLDLQI
AEETDNPTCQGRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMNDLVAKTVSYSSLGRT
HHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWASGNLEEAQHQLYRASAL
FETIRHEAQLSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVE
RQTGQQDSDPYSPITIDQILETVNAQRGLVLYYSLAAGYLYSWLLAPGAGILKFHEHYLG
DNSVEGSSDFQASSGATLPIATSSALEQHIASVREALGVESYYSRACASSETESEAGDIM
EQQLEEMNKQLNSVTDPTGFLRMVRHNNNLHRSCQSMTSLFSGTVSPSKDGTSSLPRRQN
SLAKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLVLVLEGELYLVPFALLKGSASNEYL
YERFTLIAVPALRSLGTHSKCHLRKTPPTYSSSTAMAAVIGNPKLPSAVMDRWLWGPMPS
AEEEAYMVSELLGCQPLVGSMATKERVMSALTQAECVHFATHVSWKLSALVLTPNVEGNP
PGSKSSFGHPYTIPESLRVQDDASDGESISDCPPLRELLLTAADLLDLRLSVKLVVLSSS
QEANSRVTADGLVALTRAFLAAGAQCVLVALWPVPVAASKMFIHAFYSSLLNGLKASASL
GEAMKAVQSSKAFSHPSNWAGFTLVGSDVKLNSPSSLIGQALTEILQHPERARDALRVLL
HLVEKSLQRIQNGQRNAMYTSQQSVENKVGGIPGWQALLTAVGFRLDPAASGLPAAVFFP
TSDPGERLQQCSGTLQALLGLPSPALQALCKLITASETGEQLISRAVKNMVGMLHQVLVQ
LQACEKEQDFASAPIPVSLSVQLWRLPGCHEFLAALGFDLCEVGQEEVILKTGKQASRRT
THFALQSLLSLFDSTELPKRLSLDSSSSLESLASAQSVSNALPLGYQHPPFSPTGAESIA
SDAISVYSLSSIASSMSFVSKPEGGLEGGGPRGRQDYDKSKSTHPQRATLPRRQLSPQAR
CGGNKEEEEYEGFSIISMEPLATYQGDEKARFSPEPKQPCVRAPGGARLSVSSKGSVSTP
SSPVKMTLIPSPNSPFQKVGKLASSDTGESDQSSTETDSTVKSQEEGAPKLDPQELAQRI
LEETKSHLLAVERLQRSGGPAGSTERHDREDGMGAAPNSTTVFRASETSAFSKPVLSHQR
SQLSPLTVRPQPPARSSSLPKVSSPATSEVLGKDGQSSPSSSHPSPGRDIPASPADPPLL
RLKYPSSPYSAHISKSPRNTSPGSGHQSPACSAPSPALSYSSAGSARSSPADAPDEKVQA
VHSLKMLWQSAPQPPRGPRKICRGAPGALTSKRDVLSLLNLSPRHSKEEGGADRLELKEL
PMQRRDEVPPKVPTNGHWCKETPALTASGGLSTTATTHPLRLPLANGYKFLSPGRLFPSS
KC
NT seq
7389 nt
NT seq
+upstream
nt +downstream
nt
atggaacagccgctgacgttggcgcccgagcccggctcggcgcggagtcgcaggcggcgg
gagcctgagtctccgccggcgccgattcctctctttggtgctaagactattgtccagaga
agtcctgatgaaccagcactgagcaaagctgaatttattgagaaagtccgtcagagtaac
caggcctgtcatgatggagacttccacacagctattgttttgtataatgaagccctggca
gttgatcctcagaactgcattttatatagcaatagatctgcagcctacatgaaaacccag
cagtaccacaaggcattggatgatgcaatcaaagcccgactcctcaatcccaaatggcca
aaggcatacttccgacagggtgttgccctccagtaccttggacgtcacgcagatgccctg
gcagcctttgcatctgggctggctcaagaccccaaaagtctccagcttctggtgggtatg
gtagaagctgccatgaagtctccgatgagagacaccctggagcccacttaccagcagctt
cagaaaatgaaactggacaagagtccctttgtggtcgtgtcagtggttgggcaggaactc
ctgacagctggccaccacggggcctctgtggttgtcttagaggctgctctgaagattggc
acttgcagcctcaaactgagaggctctgtcttttccgccttgagcagtgcacactggtct
cttgggaacacagagaagagcactgggtacatgcagcaagacttggacgtggccaagacc
ttaggtgaccacacaggagagtgccgagctcacgggaacctaggctctgcgttcttctct
aaagggaattaccgagaggctctcacaaaccacaggcatcagttggtgctcgccatgaag
ctcaaggatcgggaggcagcttcgtcagccctgagcagtctaggccatgtgtacaccgcc
attggagactatcccaatgctctggccagtcacaaacagtgcgttcttcttgccaaacag
tccaaagatgaactttctgaagcccgagaactcggcaacatgggagctgtgtacattgcc
atgggtgactttgaaaatgctgtgcagtgccatgaacagcacctgcggatagccaaggac
ctggggagcaagcgggaagaggcccgtgcctacagcaacctgggcagtgcctaccactac
cggaggaactttgacaaggccatgtcctaccacaactgtgtgctggagctggcacaggag
ctgatggagaagtccattgagatgcgggcctatgccggcttgggccacgctgccagatgc
atgcaggacttggagagggccaaacagtaccatgagcagcagctgggtattgctgaggac
ctcaaggaccgagctgcggagggccgtgcatcctccaatctggggatcatccaccagatg
aaaggcgattatgacactgccctgaagctccacaaaagccacctgtgcattgcccaagag
ctgagcgactatgcagcccagggccgcgcctacgggaacatgggcaatgcctacaatgcc
ctgggcatgtacgaccaggctgtcaagtaccaccgtcaggagctgcagatttccatggag
gtgaacgaccgtgcctctcaggcttcaactcatggaaatttggctgttgcctaccaggcc
ctgggagcccacgaccgggccctgcagcattaccagaaccacttgaacattgcccgggag
ctccgagacatccagagtgaggcccgggcactaagcaacctggggaatttccattgctca
agaggagagtatgtccaggctgcaccctactatgagcagtacctccgcctcgctcctgac
ctccaagacatggagggagaaggaaaggtctgccacaacctcggctatgcccactactgc
cttggaaactaccaggaggctgtaaagtactatgagcaggacctggccctggccaaagac
cttcatgacaaactgagccaagcaaaagcctattgtaacttgggcctggccttcaaggca
ctgctgaattttgctaaagccgaggagtgtcagaaataccttctgtccctagctcagtcc
ctggataattcccaggctaagtttcgagccctaggaaacctgggcgatatatttgtctgt
aaaaaggatgtaaacggtgcaataaagttctacgagcagcagttgggcttagctcaccat
gtgaaagacagaaggctggaggccagtgcctatgcagccctgggtaccgcataccgaatg
atccagaagtacgacaaggccctgggttatcacacacaggagctggaggtctatcaggaa
ctgagtgacttgccaggggagtgccgggctcatgggcacctggcggctgtctacatggcc
ctgggaaaatatacaatggcattcaagtgttaccaggaacaactggagctggggcggaag
ctgaaagagccgagtctggaagcccaggtgtatggcaacatgggcatcacaaagatgaat
atgaacgtgatggaggacgccatcggctacttcgagcagcagctggccatgctgcagcag
ctcagcggcaatgagtctgtgctggacaggggccgggcttacggcaacctgggggactgc
tacgaggccctgggggactacgaggaagccatcaagtactatgagcagtacctgtctgtc
gctcagagtctgaaccgcatgcaagaccaagccaaggcctaccggggtctaggcaatggg
cacagggctacagggagcttgcagcaggcccttgtgtgctttgagaagaggcttgtggtg
gcccatgagcttggggaggcctccaataaggctcaggcctatggagagctgggaagtctc
cacagccagttagggaattatgaacaagccatttcctgccttgaacgccagctgaacatt
gccagggacatgaaggaccgagccctggagagtgacgcggcctgcggactggggggtgtc
taccagcagatgggagagtacgacacagccctgcagtatcaccagctcgatctgcaaatt
gcagaggagaccgacaaccccacgtgccagggccgagcctatgggaacctgggtctgacc
tatgagtccctgggcaccttcgagagggccgtggtctatcaagagcagcacctgagcatt
gcagcacagatgaatgacctggtggccaagacagtgtcctatagcagcctgggaaggacg
caccacgccttgcagaactattcccaggcagtcatgtacttacaggaaggtttaaggtta
gctgaacaactgggccgaagagaagatgaggcaaaaattcgccatggtcttggtctctcc
ctttgggcaagtggaaacctggaggaagctcagcaccagctttacagggcatcggcattg
tttgaaacgatccggcatgaggcacagctgagcacagactacaagctctccctctttgac
ctgcagacatcatcctaccaggccttgcagcgggtgctggtcagcttaggccaccatgat
gaagccctggcagtagcagaaagaggtcggacgcgggcatttgctgacctgctggtagaa
agacagacgggacaacaggactcggacccctactcacccatcaccatcgatcagatccta
gagacggtcaatgcacagcggggcctggtgctctactattccctggccgctggctacctc
tacagctggctgcttgctcctggagcaggaatcctgaagtttcacgagcattacctgggt
gataactcagtagaaggttccagtgacttccaagccagcagcggtgcaactctgcccata
gcgaccagttctgccctggagcagcacattgccagcgtccgggaagccctgggggtagag
tcttactactccagggcctgtgccagcagtgagacagaaagtgaagctggagacatcatg
gagcagcagttggaggagatgaacaagcagcttaactcggtgactgaccccacgggcttc
ctgaggatggtacgacacaataacaacctgcacaggagctgccagagcatgacaagcttg
ttcagtggtaccgtgtcgcccagcaaggatgggacttcctctctccctaggaggcagaac
tcattggccaagccaccactccgtgccctgtatgatctgctcatcgcacccatggaaggg
ggcctgatgcactcaagtggccccgtgggccggcaccggcagctggtcctggttctggag
ggggagctctaccttgtcccctttgctctcctgaagggcagtgcctccaacgagtaccta
tacgagcgcttcaccctcattgccgtgcctgctcttcgctcgcttggtacacactccaag
tgtcacctgaggaagaccccacccacatattccagctccactgcgatggcagcagtcata
ggcaaccccaagctcccatcagcagtaatggacagatggctgtggggtccaatgccttct
gcagaggaggaagcatacatggtatcagagcttctgggctgtcagccccttgtgggcagt
atggccaccaaggagagggtcatgagcgcactgacccaggctgagtgtgtccactttgct
acccatgtctcttggaaactgtcggccttagtcctcacacccaacgtggagggcaaccct
cccggcagcaagagctccttcggtcacccctacacgatccccgagtcactgcgggtgcag
gatgacgcaagcgatggagaaagcatctcagactgcccaccgctgcgggagctgctcctc
actgctgctgacctcctggacctgcggctatctgtgaagctggtggtgctcagctcttcc
caggaggccaatagccgagtcacagcagatggcttggtggcactgacacgggccttcctc
gctgctggtgcacagtgtgtcctggtggctctgtggccagtaccagtagcagcttctaag
atgtttattcatgccttctactcatccctgctgaatggcctaaaggccagtgcctcccta
ggtgaggccatgaaggcagtgcaaagcagcaaggccttctcacacccctccaactgggca
ggtttcacacttgtcgggagtgatgtaaagctgaacagcccctcctcactcatcggccag
gccctcacggagatcctgcagcacccagagcgggcacgggatgccctacgagtgctgctg
cacctggtggagaagtccctgcagcgcatccagaatgggcagcgcaatgccatgtacaca
tctcaacagagtgtggagaacaaagtgggtggcatccccggatggcaggccctcctcact
gctgtgggcttccgcctggaccctgctgccagcggcctgccagcagctgtcttctttcca
acctcagacccaggcgagaggttacagcaatgcagtggcactctccaggccctgctgggt
ctgcccagcccggccctccaagcactgtgcaagctcatcacggcctcagagactggagag
cagcttattagccgggctgttaaaaatatggtgggaatgctccatcaggtgctggtccag
ctgcaggcctgcgagaaggaacaggactttgcctcagctcccattccggtctccctcagt
gtccagctgtggcgtctcccagggtgtcatgagtttctggcagctctcggttttgacctg
tgtgaagtgggccaggaggaagtgatcctgaagaccgggaagcaggctagccggcgcact
acccactttgcacttcagtccttgctgtcactcttcgattccacagagctccccaaacgc
ctcagcctggacagttcatcttccctggagtcactggcatcggcacagtctgtatccaat
gcactgcccctgggctaccagcaccctcctttctctcccactggggcagagagcattgcc
tctgatgccatctctgtgtacagtctcagctccattgcctcctccatgagttttgtctcc
aagcccgaggggggtttggaaggtgggggcccccgaggtcgacaggactatgataagtcc
aagagcacccacccacagcgagccaccctgccacggcgccagctgtcccctcaggccaga
tgtgggggcaacaaggaagaagaagaatatgaggggttctctatcatcagcatggaacct
ctggcaacctaccaaggtgatgagaaggcacgcttctccccagagcccaagcagccctgc
gtcagggcaccaggtggagcaaggctttcagtcagctccaaaggaagtgttagcactccc
agttcccccgtgaagatgaccctgatccccagcccgaactcccccttccagaaagtggga
aaactggcaagctcagacacaggtgagtctgaccaatccagcacagaaacggacagcaca
gtgaagtcccaggaggagggcgccccaaagctcgacccccaggagctggcccagaggatc
ctagaggagactaaaagccacctccttgcagtagagcgtcttcagaggagtggtggccca
gcaggcagcactgagaggcatgaccgagaggatggcatgggagcagcacccaacagtacc
acagtcttcagagcttcagaaaccagcgccttcagcaaacctgtactgtcccatcagagg
agtcagctgtcgccactcaccgtgagaccgcagcccccagccaggagctcatcgctcccc
aaggtgagcagtcccgccacatcagaggtgctgggcaaggatggccagagctcgcctagc
agcagccacccatcacctggccgtgacatcccagcctcccctgcagacccaccgctctta
agactcaagtaccccagctctccttacagtgcccacatttctaagtccccccggaacaca
tcccctggctcaggccaccaatcccctgcgtgcagtgcaccatctcctgcactctcctac
tcctcagctggctctgctcgctctagtccagctgatgctcccgatgagaaggtgcaggca
gtgcacagcctcaagatgctctggcagagtgcaccccaaccccccaggggtccccggaaa
atatgccgaggtgcaccaggagccttgacatccaaaagagatgtccttagcctgctgaac
ttgtcccctcgacacagcaaagaagagggcggggcagacagactggaactgaaggagctg
cctatgcagcggcgtgatgaggtgccacccaaagtccccaccaacggtcactggtgcaag
gagacaccagcgctgacagcatctggtggcctcagcaccacagctaccacccaccctctg
agactgcccttggccaatggttacaagtttctgtccccaggaagactcttcccttcctcc
aaatgttaa
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integrated database retrieval system
