Arvicola amphibius (Eurasian water vole): 119825045
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Entry
119825045 CDS
T08327
Symbol
Smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04110
Cell cycle
aamp04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
119825045 (Smc3)
04114 Oocyte meiosis
119825045 (Smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aamp03036
]
119825045 (Smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
aamp00535
]
119825045 (Smc3)
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
119825045 (Smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
119825045 (Smc3)
Proteoglycans [BR:
aamp00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
119825045 (Smc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
119825045
NCBI-ProteinID:
XP_038201587
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Position
1:192882147..192921474
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLDHFRRKGINQHVQNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESEKG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggtgattatccagggcttccgaagttaccgagatcagacgattgta
gatcctttcagctccaaacataacgttattgtgggcagaaatggatctggaaaaagcaac
tttttttatgcaattcagtttgttctcagtgatgaatttagtcatcttcgcccggagcag
cgattggctttgttgcatgagggtacaggtcctcgtgttatttctgcttttgtggaaatc
atttttgacaattcagacaaccggttaccaattgataaagaggaagtttcacttcgaaga
gttattggtgccaaaaaagatcagtatttcctagataagaagatggtcacgaaaaatgat
gtgatgaacctccttgaaagtgctgggttttctcgaagtaatccctactacatcgttaaa
caaggaaagatcaaccaaatggcaacagcaccagattctcagagattgaagctgttgaga
gaggtagctggtactagagtgtatgatgaacgtaaagaagaaagcatttctttaatgaaa
gaaacagagggtaaacgggaaaaaatcaatgagttgttaaaatacatcgaagagcggttg
catactctagaggaggagaaggaagaactggcccagtatcagaagtgggataaaatgagg
cgtgccctggagtataccatctacaaccaggagctcaatgagacgcgggccaagcttgat
gagctttctgctaagcgagagacaagtggagagaaatctagacaattaagagatgcccag
caggatgccagagataaaatggaggatattgaacgccaggttagagaactgaaaacaaaa
atttcagctatgaaagaagaaaaagagcagcttagtgctgaaagacaggaacagattaaa
caaaggaccaagttggaacttaaagccaaggatttacaagatgagctggccggcaatagc
gaacagcggaaacgtttactaaaagagaggcagaagctgcttgaaaaaatagaagaaaag
cagaaagaattggcagagacagaacctaaattcaacagcgtaaaagaaaaagaagagcga
ggaattgctagattggctcaagctacccaggaaagaactgacctttatgcaaagcagggt
cgaggaagccagtttacatcaaaagaagaaagggataagtggattaaaaaggagctgaag
tctttagatcaggctattaatgacaagaaaagacagattgctgctatacataaggatttg
gaggataccgaggcaaataaagagaagaatctggagcaatataataaactggatcaagat
ctcaatgaagtcaaagctcgagttgaagaactggacagaaaatattatgaagtaaaaaat
aagaaagatgaactacaaagtgaaagaaattacttgtggagagaggagaatgcagagcaa
caagcacttgctgctaagagagaagacctggaaaagaagcagcagcttcttagagcagca
acaggaaaggctattttaaatggaatagacagcataaacaaagtgttagatcattttcgt
cgaaaaggaataaaccagcatgttcaaaatggctaccatggcatcgtaatgaataacttt
gagtgtgagccagccttctatacatgtgtggaggtcactgctggtaacaggttattttac
catattgttgattctgatgaagtcagcacgaagattttaatggagttcaataaaatgaat
cttcctggagaggtgacttttctgcctcttaacaagttagatgtgagagataccgcctat
cctgaaaccaatgatgctattcctatgatcagtaaactgagatacaatccgaggtttgac
aaagctttcaaacatgtgtttgggaagacactcatctgtcggagcatggaagtttccact
cagctggcgcgtgctttcactatggattgtattactttggaaggtgatcaagtcagccat
cgaggtgctctgactggaggctattacgacacaaggaagtctcgacttgagttacagaaa
gacgtcagaaaagcagaagaggagctgggtgaacttgaagcaaagctcaatgaaaacctg
cgcagaaacattgaaaggattaataatgaaattgatcagttgatgaaccaaatgcagcag
atagagacccaacaaaggaaatttaaagcttccagagatagcatattatcagagatgaag
atgctaaaagagaagaggcagcagtcagagaagacctttatgccaaagcaacgtagctta
caaagcttggaggcaagtctgcatgccatggagtctaccagagaatcgctgaaagcagaa
ctaggaactgatttgctttcacaactcagtctagaagatcagaaaagagtagatgcactg
aatgatgaaatccgtcagcttcagcaggaaaacagacagctgctaaatgaaagaattaaa
ctagaaggtattattactcgagtagagacttacctgaatgagaatctgaggaaacgtttg
gaccaagtagaacaggaacttaatgaattaagagagacagagggtggtactgttcttact
gccacaacatcagaacttgaagctatcaataaaagagtaaaagatactatggcaagatca
gaagatttggataattccattgacaaaacagaagctggaattaaagagctccagaaaagt
atggagcgctggaaaaatatggagaaagaacacatggatgccataaatcatgacactaaa
gagctggagaagatgaccaaccgccagggcatgctgctgaagaagaaggaggagtgcatg
aagaagatccgcgagctgggctcccttccccaggaagcgttcgagaagtaccagacgctg
agccttaagcagttgttccgaaaacttgagcagtgcaacacggagttaaagaagtacagt
catgttaacaaaaaagctctggatcagtttgtgaacttctctgagcagaaggaaaagttg
ataaagcgacaagaagaattggataggggctacaaatccatcatggaattaatgaatgtg
cttgaacttcgaaaatatgaagctattcagttaactttcaaacaggtttctaagaacttc
agtgaagtgttccagaagttggtacctggtggcaaagcgactttggtgatgaagaaagga
gatgtggagggcagtcagtctcaggatgaaggggaaggcagtggggagagtgagaagggc
tctggctcacagagcagtgttccgtcagtcgaccagttcaccggagtcggaatcagggtg
tcgttcacaggaaagcaaggagaaatgagagaaatgcagcagctctcaggcggacagaag
tctctggtggctcttgctctgatttttgccattcagaaatgtgaccctgctcctttttac
ttgttcgatgagattgaccaagcgttggatgctcagcacagaaaagctgtgtcagatatg
atcatggaactggctgtgcatgcccagtttatcactactacttttaggcctgaactactg
gagtcagccgacaaattctatggcgtaaagttcagaaataaggtcagtcacattgatgtg
atcacagcagagatggccaaagattttgtagaagacgacaccacccatggttaa
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integrated database retrieval system