KEGG   Arvicola amphibius (Eurasian water vole): 119825045
Entry
119825045         CDS       T08327                                 
Symbol
Smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
  KO
K06669  structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Pathway
aamp04110  Cell cycle
aamp04114  Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    119825045 (Smc3)
   04114 Oocyte meiosis
    119825045 (Smc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aamp03036]
    119825045 (Smc3)
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:aamp00535]
    119825045 (Smc3)
Chromosome and associated proteins [BR:aamp03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Cohesin complex
    119825045 (Smc3)
  Meiosis-specific proteins
   Cohesin complex and associated proteins
    119825045 (Smc3)
Proteoglycans [BR:aamp00535]
 Extracellular matrix (ECM) proteoglycans
  Basement membrane proteoglycans
   119825045 (Smc3)
SSDB
Motif
Pfam: SMC_N SMC_hinge AAA_15 AAA_21 AAA_23 AAA_29 OmpH FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 119825045
NCBI-ProteinID: XP_038201587
LinkDB
Position
1:192882147..192921474
AA seq 1217 aa
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLDHFRRKGINQHVQNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESEKG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq 3654 nt   +upstreamnt  +downstreamnt
atgtacatcaagcaggtgattatccagggcttccgaagttaccgagatcagacgattgta
gatcctttcagctccaaacataacgttattgtgggcagaaatggatctggaaaaagcaac
tttttttatgcaattcagtttgttctcagtgatgaatttagtcatcttcgcccggagcag
cgattggctttgttgcatgagggtacaggtcctcgtgttatttctgcttttgtggaaatc
atttttgacaattcagacaaccggttaccaattgataaagaggaagtttcacttcgaaga
gttattggtgccaaaaaagatcagtatttcctagataagaagatggtcacgaaaaatgat
gtgatgaacctccttgaaagtgctgggttttctcgaagtaatccctactacatcgttaaa
caaggaaagatcaaccaaatggcaacagcaccagattctcagagattgaagctgttgaga
gaggtagctggtactagagtgtatgatgaacgtaaagaagaaagcatttctttaatgaaa
gaaacagagggtaaacgggaaaaaatcaatgagttgttaaaatacatcgaagagcggttg
catactctagaggaggagaaggaagaactggcccagtatcagaagtgggataaaatgagg
cgtgccctggagtataccatctacaaccaggagctcaatgagacgcgggccaagcttgat
gagctttctgctaagcgagagacaagtggagagaaatctagacaattaagagatgcccag
caggatgccagagataaaatggaggatattgaacgccaggttagagaactgaaaacaaaa
atttcagctatgaaagaagaaaaagagcagcttagtgctgaaagacaggaacagattaaa
caaaggaccaagttggaacttaaagccaaggatttacaagatgagctggccggcaatagc
gaacagcggaaacgtttactaaaagagaggcagaagctgcttgaaaaaatagaagaaaag
cagaaagaattggcagagacagaacctaaattcaacagcgtaaaagaaaaagaagagcga
ggaattgctagattggctcaagctacccaggaaagaactgacctttatgcaaagcagggt
cgaggaagccagtttacatcaaaagaagaaagggataagtggattaaaaaggagctgaag
tctttagatcaggctattaatgacaagaaaagacagattgctgctatacataaggatttg
gaggataccgaggcaaataaagagaagaatctggagcaatataataaactggatcaagat
ctcaatgaagtcaaagctcgagttgaagaactggacagaaaatattatgaagtaaaaaat
aagaaagatgaactacaaagtgaaagaaattacttgtggagagaggagaatgcagagcaa
caagcacttgctgctaagagagaagacctggaaaagaagcagcagcttcttagagcagca
acaggaaaggctattttaaatggaatagacagcataaacaaagtgttagatcattttcgt
cgaaaaggaataaaccagcatgttcaaaatggctaccatggcatcgtaatgaataacttt
gagtgtgagccagccttctatacatgtgtggaggtcactgctggtaacaggttattttac
catattgttgattctgatgaagtcagcacgaagattttaatggagttcaataaaatgaat
cttcctggagaggtgacttttctgcctcttaacaagttagatgtgagagataccgcctat
cctgaaaccaatgatgctattcctatgatcagtaaactgagatacaatccgaggtttgac
aaagctttcaaacatgtgtttgggaagacactcatctgtcggagcatggaagtttccact
cagctggcgcgtgctttcactatggattgtattactttggaaggtgatcaagtcagccat
cgaggtgctctgactggaggctattacgacacaaggaagtctcgacttgagttacagaaa
gacgtcagaaaagcagaagaggagctgggtgaacttgaagcaaagctcaatgaaaacctg
cgcagaaacattgaaaggattaataatgaaattgatcagttgatgaaccaaatgcagcag
atagagacccaacaaaggaaatttaaagcttccagagatagcatattatcagagatgaag
atgctaaaagagaagaggcagcagtcagagaagacctttatgccaaagcaacgtagctta
caaagcttggaggcaagtctgcatgccatggagtctaccagagaatcgctgaaagcagaa
ctaggaactgatttgctttcacaactcagtctagaagatcagaaaagagtagatgcactg
aatgatgaaatccgtcagcttcagcaggaaaacagacagctgctaaatgaaagaattaaa
ctagaaggtattattactcgagtagagacttacctgaatgagaatctgaggaaacgtttg
gaccaagtagaacaggaacttaatgaattaagagagacagagggtggtactgttcttact
gccacaacatcagaacttgaagctatcaataaaagagtaaaagatactatggcaagatca
gaagatttggataattccattgacaaaacagaagctggaattaaagagctccagaaaagt
atggagcgctggaaaaatatggagaaagaacacatggatgccataaatcatgacactaaa
gagctggagaagatgaccaaccgccagggcatgctgctgaagaagaaggaggagtgcatg
aagaagatccgcgagctgggctcccttccccaggaagcgttcgagaagtaccagacgctg
agccttaagcagttgttccgaaaacttgagcagtgcaacacggagttaaagaagtacagt
catgttaacaaaaaagctctggatcagtttgtgaacttctctgagcagaaggaaaagttg
ataaagcgacaagaagaattggataggggctacaaatccatcatggaattaatgaatgtg
cttgaacttcgaaaatatgaagctattcagttaactttcaaacaggtttctaagaacttc
agtgaagtgttccagaagttggtacctggtggcaaagcgactttggtgatgaagaaagga
gatgtggagggcagtcagtctcaggatgaaggggaaggcagtggggagagtgagaagggc
tctggctcacagagcagtgttccgtcagtcgaccagttcaccggagtcggaatcagggtg
tcgttcacaggaaagcaaggagaaatgagagaaatgcagcagctctcaggcggacagaag
tctctggtggctcttgctctgatttttgccattcagaaatgtgaccctgctcctttttac
ttgttcgatgagattgaccaagcgttggatgctcagcacagaaaagctgtgtcagatatg
atcatggaactggctgtgcatgcccagtttatcactactacttttaggcctgaactactg
gagtcagccgacaaattctatggcgtaaagttcagaaataaggtcagtcacattgatgtg
atcacagcagagatggccaaagattttgtagaagacgacaccacccatggttaa

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