Arvicola amphibius (Eurasian water vole): 119825164
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Entry
119825164 CDS
T08327
Symbol
Ddx54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aamp03009
]
119825164 (Ddx54)
Enzymes [BR:
aamp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119825164 (Ddx54)
Ribosome biogenesis [BR:
aamp03009
]
Eukaryotic type
Pre-60S particles
Helicases
119825164 (Ddx54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Motif
Other DBs
NCBI-GeneID:
119825164
NCBI-ProteinID:
XP_038201796
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All DBs
Position
10:119770665..119787105
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AA seq
872 aa
AA seq
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MAAGRSVGPGPRSRAAMAPWKKKGLRKRRTGASQARDSDSEDGEFEIQAEDDARARKLGP
GRALPSFPTSECLSDVEPDTRELVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTP
IQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFERLKAHSAQTGARALILSPTRELALQ
TMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLMHVAVEMNLKLQSV
EYVVFDEADRLFEMGFAEQLQEIISRLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRL
DVDTKLNEQLKTSFLLVREDTKAAVLLYLLRNVVRPQDQTVVFVATKHHAEYLMELLTAQ
GVSCAHIYSALDQTARKINLAKFIHNKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKL
FLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRSITLAQPHQESSGAVGGDGVLG
RVPQSVVDDEDSGLQTALEASLELRSLHRVADNAQQQYVRSRPAPSPESIKRAKELDLAG
LGLHPLFSSRFEEGELQRLQLVDSIRNYRTRTTIFEINASSRDPSSQMMRAKRQRDRKAI
ASFQQGRQERQEGPADPVPQKELPQKEEEEEDMAENVEDVFTEVVGQKRPKPGPNRGAKR
RREEARQRDQEFYVPYRPKDFDSERGLSVGGAGGAFEQQVAGAVLDLMGDEAQNMTRGQQ
QLRWDRKKKRFVGQSGQEDKKKIKTESGRYISSSYKRDLYQKWKQKQKIDDRDSEEEGPS
NQRGPGPRRGGKRGHSQGGSLPRGAPKGRMRSELKTKEQILKQRRQAQKQRFLQRGGLKQ
LSARNRRRAQELRQGAFGRGAPSRKGKMRKRM
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggctgccggtagaagcgtgggtcccggcccgcggtcacgtgccgccatggctccgtgg
aagaagaagggactgaggaagcgccggactggggcttcccaggcacgcgacagcgactcg
gaggacggcgagtttgagatccaggcggaggatgacgctcgggcgcgaaagctgggccct
ggcagagccttgccctcctttcctacctcagagtgcttatcagatgtggagcctgacacc
cgggagttggtacgagcccagaacaagaaaaagaagaagtctggtggcttccagtccatg
ggcttgagctaccctgtgttcaaggggatcatgaaaaagggctacaaggtgccaacgccc
atccagagaaagactattcctgtgatcttggacggcaaggacgtggtggccatggcccgg
acaggcagtgggaaaacagcctgtttcctcctccccatgtttgagcggctgaaggcgcac
agcgcacagacaggagcccgggccctcattctctctcccacccgagagctggctctgcag
actatgaagttcaccaaagagctgggcaagttcaccggcctcaagacagccttgatcctg
ggcggggacaaaatggaggaccagtttgcggctctgcatgagaaccctgacataattatt
gccacccctgggcggttgatgcatgtggctgtggagatgaacttgaagctacagagcgtg
gagtatgtggtttttgatgaagcggacaggctctttgaaatggggtttgctgagcagcta
caggagatcataagccgccttcctggaggccaccagacagtgctgttctcggctacattg
cccaaactgctggtggaatttgctcgggcaggtctcacagagcccgtgctcatccgtctg
gatgtggacaccaagcttaatgagcagctcaagacctccttcctccttgtgcgtgaggac
accaaggctgccgtgctgctctacctgctgcgcaatgtcgttcgaccccaggaccagacg
gtggtgtttgtagccaccaagcaccacgcagagtacctcatggagttgctgacggcccag
ggtgtgagctgtgcccacatctacagtgcgctggaccagacggcccgcaagatcaacttg
gcgaaatttatacacaacaaatgttcgaccctaatcgtgaccgacctggctgcccggggc
ctggacatcccactgctggacaacgtcatcaactacagcttccccgccaagggcaagctc
ttcctgcatcgcgtgggccgtgtggcccgagcaggtcgaagtggcacagcctattccttg
gtggctccagatgaggtcccctacctgcttgacctgcacctgttcctgggccgctccatc
accctcgcccagcctcaccaggagtcctcaggtgcagtaggtggagatggtgtgctgggc
cgggtgccacagagtgtggtggatgatgaggacagcggcctacagactgccctggaggcg
tccctggaacttcggagcctgcaccgcgtggccgacaacgcccagcagcagtacgtgcgc
tcacgtccagcaccctcacccgagtccatcaagagagccaaggaactggacctggcgggg
ctgggcttgcacccactcttcagttcccggtttgaagagggagaactgcagcgcctgcag
ctggtggacagcatcaggaactatcgcacccgcacaaccatctttgagatcaatgcctcc
agccgagacccaagcagccagatgatgcgtgccaagcggcagagggaccgaaaagcaatc
gccagcttccagcaggggcggcaagagaggcaggagggcccagctgacccagtcccccag
aaggagctgcctcagaaggaagaggaagaggaggacatggctgagaatgtggaggatgtc
ttcacagaggttgtgggccagaagcggccaaagccgggacccaaccgaggagccaaaagg
cggagggaggaggctcgtcagcgagaccaggagttttatgtcccctaccggcctaaggat
tttgacagtgagcgggggctgagcgtcggtggggctggaggggcctttgagcagcaggtg
gccggtgcggtccttgacctgatgggggacgaggcgcagaacatgacccgaggtcagcag
cagctcaggtgggaccggaagaagaagcggtttgtggggcagtcaggccaggaggacaag
aagaagatcaagaccgagagtggccggtacatcagcagctcctacaagcgtgacctctac
cagaagtggaagcagaagcagaaaatcgatgaccgggactctgaggaagaagggccatcc
aaccagcgaggccctgggccccgcagaggtggaaagcgagggcacagtcaaggtgggtcc
ctgccccgaggtgcccccaaaggtcgcatgcgctcagaactcaagaccaaggaacagatc
ctgaaacagcggcgtcaagcccagaagcagcgcttcctgcagcgcgggggcctgaagcag
ctttcagcacgcaaccgccgccgagctcaagagctgcgccagggtgcctttggccggggc
gccccctccaggaagggcaagatgaggaagaggatgtga
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