Arvicola amphibius (Eurasian water vole): 119825168
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Entry
119825168 CDS
T08327
Symbol
Vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119825168 (Vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119825168 (Vps8)
Membrane trafficking [BR:
aamp04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
119825168 (Vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
Beta-prop_WDR36-Utp21_1st
zf-RING_Vps41
TPR_VPS8_2
WD40_CDC20-Fz
Clathrin
TPR_Vps41
zf-RING_11
zf_RING_Vps8_fungal
zf-RING_2
zf-RING_UBOX
Beta-prop_WDR3_1st
zf-RING_5
zf-C3H2C3
zf-C3HC4
Beta-prop_WDR5
EIF3I
WDR55
PHD
GED
Motif
Other DBs
NCBI-GeneID:
119825168
NCBI-ProteinID:
XP_038201799
LinkDB
All DBs
Position
10:complement(72085273..72302003)
Genome browser
AA seq
1425 aa
AA seq
DB search
MENEPDQENLEQNLCARTTEEELNKSFSLEASLSKFSCIDLDKELEFKNDLIDDKEFDIP
QVDTPPTLESILNETDDEDESFVLEDPTLLNIDTIDSHSYDTSSVASSDSGDRANLKRKK
KLPDAFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFDQ
NQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSISDAHP
PGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEPLH
SKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVN
NSVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTVVLLDSVE
KLHVIDRQTQEELETMEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSYGG
QIFYLGTKSVYVMMLRSWRERMDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDVSKRK
AVVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDTVPVIVDYCLLLQRKDLLFSQMY
DKLSENSVAKGVFLECLEPYILSDKLVGITPQVMKDLIVHFQDKKLMDSVEALIVHMDIT
SLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFKVIAPPLNAGKTLTDEQVVMG
NKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSVEASSEEEVYPYVRTLLH
FDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQL
AKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMAEK
AEFYQICEFMYERAHQYDKIIDCYLHDPLREEDVFNYIHNILSIPGHSAEEKQSVWQKAM
DHMEELVSLKPCKAAELVATHFSGQIEVVIGQLQNQVLLFKFLRSLLDPREGVHVNQELL
QIPPSVTERFIELLCQFSPDQVTETLQVLECYRLEETIQITQKYQLHEVTAYLLEKKGDV
HGAFLLLLERLQSRLQEITRQGGNTTEAFPLKAVEDTMVETIALCQRNSQNLNQQQREAL
WFPLLEAMMAPQKLSSSAAPHRHCEALKSLTMQVLNSMAAFIALPSILQRILQDPIYGKG
KLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVSRGLNPKQDYCSICL
QQYKRRQEMADEIIVFSCGHLYHSFCLQSKECTLETEGQTRWICYKCSSSSKAGKLSENP
SEDKKGRVTSQAKALPSYQQTKEDPAVRKANSEPVLDPQQIQAFEQLCRLYRGSSRLALL
TELSQNRSGDSCRPFAGSQSGPAFNSIFQNENFQLQLAPPPVAED
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaaccagaccaggagaatttggaacagaacctgtgtgccaggactactgag
gaagagttgaacaagtctttcagtcttgaagcttctctttcaaaattttcttgcatagat
ctggataaggagctggagttcaaaaatgatctgattgacgacaaggagtttgatattcct
caagtggacacccctcccactctggagagcatacttaacgagaccgatgatgaagatgag
tcctttgttctcgaggaccctaccttgctaaacatcgacaccattgattctcactcttac
gacacctcctctgtggcgagctcagacagcggcgacagggccaacttaaagaggaagaag
aagttgcctgatgccttctcactgcatgggtcggttatgcgacattcactcctgaaggga
atatctgctcagattgtgtctgccgctgacaaagtcgatgctggcttacccacagcaatt
gcggtatccagtctcatagcagtgggcacatctcatggattggctttaatatttgatcag
aatcaagccctgcgcctctgcctgggcagcacaagtgtcggagggcagtatggagccatc
tctgccctcagcatcaacaatgactgctcgagacttctctgtggctttgctaaaggacag
atcaccatgtgggatttggccagcgggaaacttctcaggtcaatatcagatgctcaccct
ccagggacagccatcttgcacatcaagttcacagatgacccaactcttgccatctgcaac
gacagcggaggctctgtttttgagctaacatttaagagagtgatgggagtgaggacatgt
gagtcgaggtgtctgttcagcggctccaagggtgaagtttgctgcatcgagcccctgcat
tcgaagcccgagttgaaggatcaccccatcacacagttttcactgttggccatggcatct
ttaacaaagatattggtcattgggttgaaaccatccctgaaagtgtggatgacttttcca
tatggacggatggacccgtccagtgttccgctgctggcctggcactttgtggctgtgaat
aactctgtgaaccccatgcttgccttctgcagaggagatgtggttcattttctcttggtt
aagagagatgagtcaggcgcaatccacgtcaccaagcagaagcaccttcacctgtactac
gatctgatcaactttacctggataaactcacgcacagttgtgcttttagacagcgtggag
aagttgcacgtgattgatcggcagactcaggaggaactggagacaatggagatctcagaa
gtccagctggtctataacagcagccacttcaagtccctggccactggaggaaatgttagc
caggctctggctttggttggagagaaggcttgctatcaatccatcagcagctatggtggt
cagatcttctatctggggacaaagtctgtgtatgtgatgatgctgaggagctggagggag
agaatggatcatctcctgaagcaggattgtcttacagaagccttggctcttgcgtggtct
tttcatgaaggaaaggcaaaagcagtcgtgggactctcgggggatgtcagtaaaaggaag
gctgtggtcgcagatcggatggtagagatcctgttccattatgcagatcgggctctgaaa
aagtgcccagaccaggggaaaatccaggtgatggagcagcacttccaggacacagtgccc
gtcatagtggactactgccttctgctccaacgaaaggatcttttatttagccaaatgtac
gacaaattaagtgaaaactcagtggcaaaaggagtgtttttggagtgccttgagccatat
attttaagtgataaattggtgggaattacacctcaggtcatgaaagacttgattgttcat
ttccaagacaaaaaactaatggatagtgtggaagccctcattgtacacatggacatcacc
agcctagacattcagcaggtggttctcatgtgttgggaaaatcgtctgtatgacgccatg
atctatgtctacaacagaggcatgaacgagttcattagcccgatggagaaactgttcaaa
gtcattgcccctcctctgaatgcaggaaaaactcttacagatgagcaagttgttatgggc
aacaagctcctggtgtacatcagctgttgcctggcaggtcgtgcctacccccttggtgac
atccctgaagatcttgttcccttggttaaaaaccaggtgtttgagtttctgattcggctg
cactctgtggaagcgtcctctgaggaggaagtctatccgtatgttcggactttgctacac
tttgacacaagagagtttctgaacgtcttggcactgacctttgaagattttaaaaatgac
aaacaagctgtggaataccagcaacgcattgtggatattttactgaaagttatggtggag
aattcagactttactccatcacaagtggggtgtctcttcacgttcctcgctcggcagctc
gcaaagcctgacaatactttgtttgtgaacagaactctcttcgatcaagtcctggagttc
ctgtgcagccctgacgatgactcccgccactctgaaaggcagcaggtccttttagaattg
cttcaggctggaggcatagttcaatttgaagagagtcggctcatccgcatggcagaaaag
gctgaattctatcaaatctgtgaattcatgtatgagcgagcacaccagtatgacaaaatc
attgactgctacctgcatgacccattgagggaggaagacgtcttcaattatatccacaac
atcttgtctattcctggccacagtgctgaggagaagcagtctgtgtggcagaaagcaatg
gatcacatggaggaacttgtgtccctgaagccctgtaaagctgcagagctggttgctact
cacttttctggacagattgaagtggttattggacagttacagaaccaggtcttgcttttc
aagtttttgaggagtcttcttgacccaagggagggcgttcacgtcaatcaggagttgctg
cagataccgccttctgttacagagcggttcatcgagctgctgtgtcagttcagtccagat
caagtcacagagacgctgcaagtcctcgagtgctaccgtctggaggaaaccattcagatt
acacagaagtatcagctccacgaagtcactgcgtatcttttggagaagaaaggagatgtt
cacggtgccttcctcctgctgctggagagactgcagagcagactacaagagataactcgg
cagggtggaaatacaacagaggcttttccactgaaggctgttgaagataccatggtagag
acaattgctctttgccagagaaattcacagaatttgaatcagcagcaacgagaggcgcta
tggtttccattgttggaggcaatgatggcaccacagaagctgtccagctcagctgctcct
catcggcactgcgaagctctgaaatctttgactatgcaagttctaaacagtatggcagcg
ttcattgccctcccatcgatcttacaaagaatcttgcaggacccaatttatggaaaagga
aagcttggagaaatccagggccttattctggggatgttggacacctttaactacgagcaa
actttgctggaaacaacaaccagccttctgaaccaagacctccactggtcactgtgtaac
ctgagggcttcggtctccagaggactcaatcccaaacaggactactgttctatatgttta
cagcagtacaaaagacgccaagaaatggccgatgaaatcatcgtctttagctgtggccat
ttgtatcattcgttctgtctacaaagcaaggaatgcaccctggaaactgagggtcaaacg
agatggatctgttacaaatgcagctcgagcagtaaagcgggcaagctcagtgaaaaccct
tcagaagacaagaaaggccgggtaacctctcaggcaaaagcgctgccatcataccagcag
accaaagaggaccctgctgtcagaaaggcaaactcagagcctgttctggatccacagcaa
atccaagccttcgagcagctctgccggctctaccgaggaagttctcggctggctctcctt
accgaactctcccagaaccgcagcggtgacagctgtaggccatttgcgggctcccagagc
ggccctgccttcaacagcatcttccagaacgagaacttccagctgcagctcgcgcctccc
cctgtggctgaagactga
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integrated database retrieval system
