Arvicola amphibius (Eurasian water vole): 119825226
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Entry
119825226 CDS
T08327
Symbol
Abcf3
Name
(RefSeq) ATP-binding cassette sub-family F member 3 isoform X1
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
aamp03012
]
119825226 (Abcf3)
Translation factors [BR:
aamp03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
119825226 (Abcf3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_22
AAA_29
AAA_16
NACHT
AAA
MMR_HSR1
RsgA_GTPase
AAA_15
AAA_23
DUF1672
DUF429
Dynamin_N
DUF87
Motif
Other DBs
NCBI-GeneID:
119825226
NCBI-ProteinID:
XP_038201896
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All DBs
Position
10:complement(72878424..72890290)
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AA seq
709 aa
AA seq
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MATCADILRSEFPEIDGQVFDYVTGVLHSGSADFESVDDLVEAVGELLQEVSGDSKDDAG
IRAVCQRMYNTLRLAEPQNQGNSQVLLDAPIQLSKIMENYDCDTKLPGLLKREQSSTVNA
KKLEKAEARLKAKQEKRSEKETLKTSSPLVLEEASASQAGSRKESRMESSGKNKSYDVRI
ENFDVSFGDRVLLTGADVNLAWGRRYGLVGRNGLGKTTLLKMLATRSLRVPAHISLLHVE
QEVAGDDTPALQSVLESDTVREDLLRQERELSVKIAAGRAEGSEAAQLAEIYSKLEEIEA
DKAPARASVILAGLGFTPKMQQQPTREFSGGWRMRLALARALFARPDLLLLDEPTNMLDV
RAILWLENYLQTWPSTILVVSHDRNFLNAIATDIIHLHSQRLDGYRGDFETFIKSKQERL
LNQQREYEAQQQYRQHIQVFIDRFRYNANRASQVQSKLKMLEKLPELKPVDKESEVVMKF
PDGFEKFSPPILQLDEVDFYYDPKHVIFSRLSVSADLESRICVVGENGAGKSTMLKLLMG
DLTPVRGIRHAHRNLKIGYFSQHHVEQLDLNVSAVELLARKFPGRPEEEYRHQLGRYGIS
GELAMRPVASLSGGQKSRVAFAQMTMPCPNFYILDEPTNHLDMETIEALGQALNNFRGGV
ILVSHDERFIRLVCQELWVCEKGSVTRVEGGFDQYRALLQEQFRREGFL
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggcgacttgtgccgacatcctgcggagcgagttcccagaaattgacgggcaggtcttc
gactacgtgaccggcgtcttgcacagcggcagtgcggacttcgagtctgtggacgacctg
gtggaagctgtcggcgaactattgcaagaagtgtccggggacagcaaggatgacgcgggc
atcagggctgtctgtcagcgcatgtacaacactctacgcctggctgagccacagaaccag
ggaaacagccaggtgctactggacgcccccatccagttgtcaaagataatggagaactac
gactgtgacaccaaacttccaggactgctaaagagggaacagtcctcgacagtgaatgcg
aagaaactcgagaaggctgaagctcgactgaaggcaaagcaggagaagcgttcagagaag
gaaactctgaagaccagcagccctcttgtcttggaggaggcatccgctagccaggcaggc
agcagaaaagagagtcggatggaatcatctggcaagaacaagtcctatgatgtgcgaatt
gagaactttgatgtatcctttggggatagggtactgctgactggagcagatgtgaacttg
gcatggggccgacgctatggtctggtgggacgcaatggtctggggaagacgacattgcta
aagatgctggccactcggagcctgagagttccagcccatatttccctgctgcatgtggaa
caggaagttgctggagatgacacccctgccctacagagtgttctggaaagtgacaccgta
cgggaagacctgctacggcaggaacgggagctcagtgtcaagattgctgctggcagggca
gagggctcagaagctgcacagttggcagaaatctattccaaactggaggagattgaggcc
gataaggcacctgccagagcgtcagtcattcttgcgggacttggttttacccctaaaatg
caacaacagcctaccagggagttctcaggtggctggaggatgagattggccttagcccgg
gctctgtttgccaggccagatctcctgctgttagatgaacccacaaacatgctggatgtg
agggccatcctgtggctggagaattacctgcagacatggccctccacaatcctagttgtc
tctcatgaccgcaacttcctgaatgccattgccacagacatcatccacctgcatagccaa
cgactagacggttaccggggggactttgaaacctttatcaagagcaagcaggagcggcta
ctcaatcagcagcgcgagtatgaggcccagcagcagtaccgccagcatatccaggtcttt
atagaccgttttcggtacaatgccaacagagcgtctcaagtgcagagtaaactcaagatg
ctggagaagctacctgagctaaagccggtggacaaggagtcagaggtggtgatgaagttc
cctgatggcttcgagaagttctcaccgccgattctgcagctagatgaggtggatttctac
tatgaccctaaacacgtcatcttcagtcgcctgtctgtctctgctgaccttgagtctcgc
atctgcgtggttggagagaatggggctgggaagtctactatgctgaagctgctcatgggg
gacctgactcctgttcgaggtatcagacatgcccacaggaatctaaagataggctatttc
agccagcaccacgtggaacagctagacctgaacgtcagtgctgtggaactcctggctcga
aagttccctgggcgacccgaagaggaatatcgacaccagttgggccggtatggcatctct
ggggaactggccatgcgccctgttgcaagtttatctgggggccagaagagccgggtagcc
tttgctcagatgaccatgccttgccccaacttctatattctggatgagcccacaaaccac
ctggacatggagacaattgaagctttgggccaagctctcaacaacttcaggggtggcgtg
attctggtatcccatgacgagcgcttcatccggctggtgtgccaggagctgtgggtgtgt
gagaaaggcagtgtgacccgggttgagggaggatttgaccagtaccgtgccctcctccaa
gaacagttccgccgggagggcttcctctag
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