KEGG   Arvicola amphibius (Eurasian water vole): 119825247
Entry
119825247         CDS       T08327                                 
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Pathway
aamp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    119825247
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aamp03041]
    119825247
   03032 DNA replication proteins [BR:aamp03032]
    119825247
Spliceosome [BR:aamp03041]
 Complex A
  U1 snRNP components
   Sm proteins
    119825247
  U2 snRNP components
    119825247
 Complex B
  U1 snRNP components
    119825247
  U4/U6.U5 tri-snRNP components
    119825247
 Complex C
  U2 snRNP components
    119825247
DNA replication proteins [BR:aamp03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     119825247
SSDB
Motif
Pfam: LSM Hfq GIT1_C Ldh_1_C
Other DBs
NCBI-GeneID: 119825247
NCBI-ProteinID: XP_038201934
LinkDB
Position
10:60842419..60842922
AA seq 118 aa
MSLLNKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLIAGK
NT seq 357 nt   +upstreamnt  +downstreamnt
atgagtctcctcaataaacccaagagtgagatgaccccagaggagctgcagaagcgggag
gaggaggaattcaacacaggccccctctcggtgctcacgcagtcagtcaagaacaacacc
caagtgctcattaactgtcgcaacaacaagaagctcctggggcgggtgaaggcctttgac
aggcactgcaacatggtgctagagaatgtgaaggagatgtggactgaggtccccaagagc
ggcaagggcaagaagaagtccaagcctgtcaacaaggaccgctacatctctaagatgttc
ctgcgtggggactcagtcatcgtggtgctacggaacccgctcatcgccggcaagtag

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