Arvicola amphibius (Eurasian water vole): 119825248
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Entry
119825248 CDS
T08327
Symbol
Rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
119825248 (Rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aamp04131
]
119825248 (Rabgef1)
Membrane trafficking [BR:
aamp04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
119825248 (Rabgef1)
Protein recycling
Other Rab GTPase associated proteins
119825248 (Rabgef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
CID_GANP
SSTK-IP
Motif
Other DBs
NCBI-GeneID:
119825248
NCBI-ProteinID:
XP_038201936
LinkDB
All DBs
Position
10:88428386..88482982
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AA seq
492 aa
AA seq
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MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAER
LQREEEEAFASSQSSQGAQPLTFSKFEEKKTNEKTRKVTTVKKFFSASSRVGSKKAEIQE
AKAPSPSINRQTSIETDRVTKEFIDFLKTFHKTGQEVYKQTKMFLEAMHYKRDLSIEEQS
ECTQDFYQNVAERMQTRGKVPPEKVEKIMDQIEKHIMTRLYKFVFCPETTDDEKKDLAIQ
KRIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITRCSKHIF
NAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNL
CCAVAFIEKLDAQSLNLSQEDFDRYMSGQTSPRKQEPESWSPEACLGVKQMYKNLDLLSQ
LNERQERIMNEAKKLEKDLIDWTDGIAKEVQDIVEKYPLEIKPPNQPLAAIDSENVENDK
LPPPLQPQVYAG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagcctaaagtctgaacgtcggggaattcacgtggatcaatctgagctcttgtgtaag
aaaggatgcggttactatgggaaccctgcctggcagggtttctgttccaagtgctggagg
gaagagtaccacaaggcccggcagaagcagatccaagaggactgggaactggcagaaagg
cttcagcgggaggaggaagaggcctttgctagcagccagagcagccaaggagcccagccc
ctcacattctccaagtttgaggaaaagaaaaccaatgagaagacccgcaaggtcaccaca
gtgaagaagttcttcagcgcctcttccagggtgggatccaagaaagcagaaattcaggaa
gccaaagctcccagtccctccataaaccggcaaaccagcattgagacggatcgggtgact
aaagagttcatagactttctcaagaccttccacaagacaggccaagaagtctataaacag
acgaagatgtttttggaagcaatgcattacaaaagggacttaagcatcgaggagcagtca
gaatgtactcaggacttttaccagaatgtggctgaaagaatgcagactcgtggaaaagtg
cctccagagaaagtggagaagataatggatcagatcgaaaagcacatcatgactcgtctc
tataaattcgtgttctgcccagagactactgatgatgagaagaaagatcttgccattcaa
aagaggatcagggctctacactgggtaacacctcagatgctctgtgtccctgtcaatgag
gaaatccctgaagtgtctgacatggtggtgaaagcgatcacagacatcattgagatggac
tcaaagcgtgtgcctcgggacaagctagcctgcatcaccaggtgcagcaagcacatcttc
aacgccatcaagatcaccaagaatgagccggcctctgctgatgacttccttcccaccctc
atctacatcgtgctgaagggcaacccccctcgcctgcagtctaacatccagtacattact
cgcttctgcaaccccagccggcttatgacgggcgaggacggctactacttcaccaacctg
tgctgtgctgtggctttcattgagaaattagatgcccagtctctgaatttaagtcaggaa
gattttgaccgatacatgtccggccagacctctccgaggaagcaggagcccgagagctgg
tcccccgaagcctgcttaggtgtgaagcaaatgtataagaacttggacctcctgtctcag
ctgaatgaacggcaggaaaggatcatgaatgaagccaagaaacttgaaaaagacttaatc
gactggacagatggaattgccaaggaagttcaagacattgttgagaaatacccacttgag
attaagcctccaaaccaaccattagcagccattgactctgaaaatgtggaaaatgacaag
ctccctcccccactgcagcctcaggtgtatgcagggtga
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