Arvicola amphibius (Eurasian water vole): 119825299
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Entry
119825299 CDS
T08327
Name
(RefSeq) zinc finger protein 394-like isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03030
DNA replication
aamp03410
Base excision repair
aamp03420
Nucleotide excision repair
aamp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119825299
03410 Base excision repair
119825299
03420 Nucleotide excision repair
119825299
03430 Mismatch repair
119825299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aamp03032
]
119825299
03036 Chromosome and associated proteins [BR:
aamp03036
]
119825299
03400 DNA repair and recombination proteins [BR:
aamp03400
]
119825299
DNA replication proteins [BR:
aamp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119825299
DNA Replication Termination Factors
ELG1-RFC complex
119825299
Chromosome and associated proteins [BR:
aamp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
119825299
DNA repair and recombination proteins [BR:
aamp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119825299
Check point factors
HRAD17(Rad24)-RFC complex
119825299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
KRAB
RCF1-5-like_lid
C2CH-3rd_BIRD-IDD
zf-C2H2_4
RFC_C
zf-C2H2_15
Zn_ribbon_8
zf-C2H2_6
zf-C2H2_jaz
DNA_pol3_delta2
Rad17
zf-C2H2_16
AAA
AAA_16
DUF2247
AAA_22
zf_Tbcl
ABC_tran
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
119825299
NCBI-ProteinID:
XP_038202023
LinkDB
All DBs
Position
10:complement(110700603..110753257)
Genome browser
AA seq
650 aa
AA seq
DB search
MSLWVDKYRPCSLARLDYHKEQAAQLRDLVQCGDFPHLLVYGPSGAGKKTRIMCFLRELY
GVGVKKLRIEHQAITTPSKKKIEISTIASNYHLEVNPSDAGNNDQVVIQEMLKTVAQSQQ
LETSSQRDFKMVLLREVDKLTKDGQHALRRTMEKYMSTCRLILCCNSTSKVIPLICHRCL
AVHVPPPSIDDICSVLSSVCKKEGLALPSKLAHRLAEKSCRNLRKALLMGEACRVQQYPF
TEDQEIPETDWEVYLRETANAIVSQQTPQRLLEIRGRLYELLTHCIPPEMIMKMVSVRVA
GEWCLLIILKQVPQERIQELQGHIVFPETEERADSTGILTFQDVAIDFSPDEWDCLDFAQ
RALYREVMLENYSNMVSVGISVSKPDLISSLEQSKEPWNVNTGEKEGNEKVFYFHHTQGL
FSQENRQDSIQKLISGIAHDQKQEKHYISNQNEESQNHYMECGRCLNRCACLAMYKRINP
KEKAYKCKDCGKSFAHYANLQAHQRIHTGEKPYTCQACLKSFTQVSDLHRHYRVHTGEKP
YTCQECGKSFAHVSTLHNHHRIHTGEKPFRCQECGKSFTRASTLYTHHRIHTGEKPYTCQ
ACGKSFTQVSNLHSHHRIHTGEKPYTCQACGKSFAHVSTLHNHHRIHSGE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgagcctctgggtggacaaataccggccgtgctccctcgcccggctggactatcacaag
gaacaggcggcgcagctgcgcgacctggtgcagtgtggtgactttcctcacctcctagta
tatgggccatcaggtgctggaaaaaagacaagaattatgtgtttcctacgagaactttat
ggtgtcggggtgaaaaaattgagaattgagcatcaagctatcacaactccatctaaaaaa
aaaattgaaatcagcaccattgccagtaactaccaccttgaagttaaccccagtgatgct
ggaaacaacgaccaggttgtaattcaggagatgctgaagacagtggctcagtcacaacag
cttgaaaccagctcacaaagagacttcaaaatggtattattgagagaggtggacaaactc
acaaaggatggtcagcatgccttgcgcagaaccatggagaagtacatgtccacctgcagg
ctgatcttgtgttgcaattccacatctaaggtgatccccctgatctgccataggtgtctg
gcagttcatgtgcctcctcccagcattgatgacatttgcagtgtgttatccagtgtctgc
aagaaggagggtctggctctgccttcgaagctggctcacaggctggcagagaagtcctgc
aggaacctcaggaaagccttactgatgggtgaagcttgcagagtgcagcaataccctttt
actgaagaccaagaaatccccgagacagactgggaggtgtatcttagggagactgcaaat
gctatcgtcagtcagcagactccacagaggctccttgaaatccgcgggaggctctatgag
cttctcactcactgtattcctcctgagatgataatgaagatggtgagtgtgcgtgtagca
ggtgaatggtgtctgttgataattttaaagcaagttcctcaagaaagaatccaggagcta
caagggcacatcgttttccctgaaacagaagaaagggctgattctacaggaatcttgaca
ttccaggatgtggcaattgatttctctccagatgagtgggactgcctcgactttgcacag
agagccttgtacagggaagtcatgttggagaactacagtaacatggtctctgtgggtatt
tcagtgtcaaaaccagacctgatcagctctcttgaacaaagcaaagagccgtggaatgtg
aacacaggagagaaagaaggcaatgaaaaagttttctattttcatcacacacaaggccta
ttttcacaggagaatagacaagattctatccagaaattaatatcaggaatagctcatgac
cagaaacaagagaagcattatataagcaatcaaaatgaagaaagtcaaaaccactatatg
gaatgtggaaggtgcttaaacagatgtgcatgccttgctatgtataagagaattaatccc
aaagagaaggcatataaatgtaaagattgtggcaaatcatttgcccattatgcaaatctc
caagctcaccagagaatccatactggtgagaaaccttacacatgtcaagcatgtctcaag
tcctttacccaggtgtcagatcttcacagacattacagagtccatactggtgaaaaacct
tacacatgtcaagaatgtggcaagtcttttgcccatgtctcaactctacataatcatcac
agaatccatactggagagaaacctttcagatgtcaagaatgtggaaagtcctttaccagg
gcctcaactctttatactcatcacagaatccatactggtgagaaaccttacacatgtcaa
gcatgtggcaagtcctttacccaggtctcaaatcttcacagtcatcacagaatccatact
ggtgagaaaccttacacatgtcaagcatgtggcaagtcttttgcccatgtctcaacactt
cataatcatcacagaattcattctggtgagtaa
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integrated database retrieval system
