Arvicola amphibius (Eurasian water vole): 119825342
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Entry
119825342 CDS
T08327
Symbol
Cldn5
Name
(RefSeq) claudin-5
KO
K06087
claudin
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp03272
Virion - Hepatitis viruses
aamp04382
Cornified envelope formation
aamp04514
Cell adhesion molecule (CAM) interaction
aamp04530
Tight junction
aamp04670
Leukocyte transendothelial migration
aamp05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
119825342 (Cldn5)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
119825342 (Cldn5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119825342 (Cldn5)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
119825342 (Cldn5)
09158 Development and regeneration
04382 Cornified envelope formation
119825342 (Cldn5)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
119825342 (Cldn5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aamp03037
]
119825342 (Cldn5)
04147 Exosome [BR:
aamp04147
]
119825342 (Cldn5)
Cilium and associated proteins [BR:
aamp03037
]
Other cilia and associated proteins
Stereociliary proteins
119825342 (Cldn5)
Exosome [BR:
aamp04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
119825342 (Cldn5)
Exosomal proteins of colorectal cancer cells
119825342 (Cldn5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
Motif
Other DBs
NCBI-GeneID:
119825342
NCBI-ProteinID:
XP_038202098
LinkDB
All DBs
Position
10:complement(75571687..75573103)
Genome browser
AA seq
218 aa
AA seq
DB search
MGSAALEILGLVLCLVGWVGLILACGLPMWQVTAFLDHNIVTAQTTWKGLWMSCVVQSTG
HMQCKVYESVLALSAEVQAARALTVGAVLLALVALFVTLTGAQCTTCVAPGPVKARVALT
GGALYALCGLLALVPLCWFANIVVREFYDPAVPVSQKYELGAALYIGWAASALLMCGGGL
VCCGAWVCSGRPEFSFPVKYSAPRRPAANGEYDKKNYV
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggggtccgcagcgttggaaattctgggtctggtgctgtgcctggtaggttgggtgggc
ttgatcctggcgtgtgggctgcccatgtggcaggtgactgccttcctggaccacaacatc
gtgacggcgcagacgacttggaaggggctgtggatgtcgtgcgtggtgcagagtacagga
cacatgcagtgcaaggtgtacgagtctgtgctggcgctgagtgccgaggtgcaggcagct
cgagcactcaccgtgggcgctgtactgctggcactggtggccctctttgttaccttgacc
ggcgcgcaatgcaccacctgcgtggccccgggtccagtgaaggcacgcgtggcactcacg
ggcggagcgctttacgcgctgtgtgggctgctggcgctggtgcctctctgctggttcgcc
aacatcgtggtccgcgagttctacgatccggcagtgccggtgtctcagaagtacgagctg
ggcgcggcgctgtacatcggatgggcggcctccgctctgctcatgtgcggcggcggcctc
gtgtgctgcggggcttgggtctgctccggccgcccggagttcagcttcccggtcaagtac
tcggcaccgcggcggcccgcagccaatggcgaatacgacaagaagaactacgtctaa
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