Arvicola amphibius (Eurasian water vole): 119825482
Help
Entry
119825482 CDS
T08327
Symbol
Rnf6
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aamp04121
]
119825482 (Rnf6)
Enzymes [BR:
aamp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119825482 (Rnf6)
Ubiquitin system [BR:
aamp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119825482 (Rnf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_11
zf-C3HC4_2
zf-ANAPC11
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
119825482
NCBI-ProteinID:
XP_038202296
LinkDB
All DBs
Position
10:complement(110302408..110315118)
Genome browser
AA seq
664 aa
AA seq
DB search
MNPSRSRSSGSGEETPFQENERRWQQERLRREEAYYQFINELNDEDYRLMRDHNLLGTPG
EITSEELQQRLDRAKEQLASQPGSRSGTSDTDSENQRENSDEDSLLRWLNTFRRTGNVTR
TGQNGNQSWTAVSRTNPNSGEFGFSLEIHINPDNRGSEANGEDYTDIPPSGVSRDPRQQR
SSSPVAMRTRSQTSLSSSGSGGRRGARGQRSVQGSFSARGRLRNGIGGAPRVSGHRTVIN
THTNQSDRSNFRQREQQRFGAAHIWENGARSNVTVRNTNQRLEPIRLRPAFRSRSRSPIQ
TQNGTVYHNSQRQGRPVQQTGRNRSVRHREVTQVFLEQGRARRGTVYTPLSNSRLVSRIT
VEEGEPNRSSAATQRHPAITLDLQVRRIRPGETRDRDSIANRTRSRAGLAESTVESNSGG
FHRTISHLERSGVRTYVSTITVPLRRISENEVVEPSSVALRSILRQIMTGFGELSSLTEV
EPESENQRNDQRLPELYLEVNNVDVADSSNQLGGGSSQARRAQENSAEMLDVSEPTLPQA
HSGSSRNRRQLERADSVVEAGTLPILRLAHFFLLNEGDDDPVRGLTKEQIDNLSTRSYEQ
TGVDSELGKVCSVCISDYVAGNKLRQLPCLHEFHIHCIDRWLSENCTCPVCRRPVLEFGA
ANNG
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgaatccatctagatctagatcaagtggtagtggagaagaaaccccatttcaagaaaat
gagagacgatggcaacaagagcgtctccgcagagaagaagcctattatcagtttattaat
gagctcaatgatgaagattatcggctaatgagagaccataaccttttaggcacccctgga
gaaataacatcggaggagctacagcagcgcttagatagagcgaaggaacaactggcatcc
cagcctggctcgaggagtgggacaagtgacacagactcagaaaaccagagagaaaattca
gatgaagattctctgctacgatggttgaacacttttcggcgcactggaaatgtgactcga
actggacagaatgggaaccaaagttggacagctgtgagtcgaacaaacccaaacagtgga
gagtttgggttcagcctggaaatccacataaatcctgacaacagaggctctgaagctaat
ggggaggattatacagacattcctccatcaggtgttagcagagatcccaggcagcaaaga
tcatcaagtcctgtggctatgcgaacgagaagccaaacctccctgagttccagtggttca
gggggtaggcgcggtgcaaggggtcagaggtcagtgcagggatccttctcagcacgggga
aggttaagaaatggaattggaggagctcctagagttagtggtcatcgcactgttattaac
actcacacaaaccagtcagatagaagtaatttcaggcaaagggaacaacagcggtttgga
gcagcacacatttgggaaaatggggctagaagtaatgttacagtgaggaacacaaaccaa
agattagagccaataagattacgtcctgctttcaggagtagaagccgatccccaattcag
acacagaatggtactgtttatcataattcccaaaggcagggtagaccagtccagcaaact
ggtaggaacaggtctgttaggcatagagaagtaactcaagtctttttagaacaaggtaga
gcacgcagaggtactgtttacacaccactgtccaactcaagacttgtgtcaagaataaca
gtagaagaaggagaacccaacaggtcctcagctgccacacagcgtcacccagcaatcact
ctagacctgcaagtcaggaggattcgtcctggagaaactcgagatagggatagcattgca
aatagaacccgatctagggcagggctagcagaaagtacagttgaaagcaacagcgggggc
tttcacagaactatttctcatttagagcggtcaggcgtccgaacctatgtgagtaccata
acagttcctcttcgtaggatttctgagaatgaggtggttgaaccatcctctgtggctctt
cggtcaattttaaggcagatcatgactgggtttggagagctgagttctctaacagaggtg
gaacctgagtcggagaatcaaagaaatgatcagcgtttaccagagctgtacctagaagtg
aataacgtagatgtggctgacagcagcaatcagctgggtggaggttcctcacaagccagg
agggcccaagaaaacagtgctgaaatgctagatgtaagtgagcccaccctgccacaggcc
cacagcggtagcagtaggaatagaaggcagttagagagggcggacagtgtagttgaggct
ggaacattacccattctgcgccttgctcatttcttcttactgaatgaaggcgatgatgat
ccagttcgtggtttaaccaaagagcagattgacaatctttctaccaggagctatgaacaa
accggggttgacagtgagttaggtaaagtgtgtagtgtgtgcatcagtgactatgtggct
gggaacaagctccggcagctgccatgtctgcatgagtttcacattcattgtattgatcgc
tggttgtcagagaactgcacctgtcctgtctgccggcggcctgtcttagaatttggggcc
gcaaacaatggatga
DBGET
integrated database retrieval system
