Arvicola amphibius (Eurasian water vole): 119825564
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Entry
119825564 CDS
T08327
Name
(RefSeq) phospholipid-transporting ATPase ABCA3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
aamp
Arvicola amphibius (Eurasian water vole)
Pathway
aamp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
aamp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119825564
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aamp02000
]
119825564
Transporters [BR:
aamp02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
119825564
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
AAA_15
AAA_23
RsgA_GTPase
SRP54
Motif
Other DBs
NCBI-GeneID:
119825564
NCBI-ProteinID:
XP_041909997
LinkDB
All DBs
Position
1:122340922..122442134
Genome browser
AA seq
1732 aa
AA seq
DB search
MGSLRMKQFSALLWKNSLLKRRNVVGLVVEITLIFLLFVWTLTMRRISKKKFVQAVTFIP
IPLKLPTFLNKNFEYELAYVPSESDAARNITEMVKKDLNFNFTVRGFSSEKSFEKYIKYE
NTSAYVLAAIVFDHVFKTNDERLPLQVKYNLRFGRLYNPYNPFSPSKKKRAKNWNTSTLF
PPVPSLGPRNLLQHDGGDPGYIREGFLVVQHSLDKAIMVYHSGRAAEDMFANTTIYANRF
PYPAFTDDKFLWSFISMFPWTILFTFTQMALVIVGTIMMEKEKRLKEYQLMVGLSNAMLW
VSYFVTFLLMYLIIIFLLCGILFLKITHERVFQHSDPLFIAFYFLCFAISSVLLGFMIST
LFNKASLASSIAGFLHFLTFLPYLIIVKKYGQTSLSGKLALSLITNTALAFGADLICKME
MKGDGAQWYNLATKINADDDLTLAHIIGMFLFSAFLYGLVAWYIDAVFPGNYGVPKPWNF
FLQKTYWFGEPSLSKEESQVTDVPSNDFIEPEPVGLEAGIQIQHLYKKFTLKNNTLMAVK
DLSLNLYEGQITVLLGHNGAGKTTTLSILTGLYLPTRGKVYIGGYDISTDMVQVRKSLGL
CPQDDLLFPMMTVSEHLDFYCMIKGMPSNKRSREIRRMLTAFDLLHKSDTMTKNLSGGMK
RKLSIIIALIGDTKVVILDEPTSGMDPVSRRATWDLLQQYKENRTILLTTHHMDEADVLG
DRIAILVMGTLKCCGSSLFLKKLYGVGYHLVMVKTLECDVEKISELIKNYIPTAEMEMNV
AAELSFILPKEYTHRFSELFAEIEKRQEELGIIGFGVSMTTMDEVFFKVSNLEDLKLNTE
STYPTSTKEQSTNNDNQNMNVPRNFDRKNYPRRSYDSSFNTGWVLYAQQFRAMLIKRAVF
SWRNWKLLLLQLLALLGLMYLLMRGISFSTTREPARVMDLEQYMETIVPFSISGDPDLTQ
NLTKNLEIMLKAKKQELHEVQGDVQSYLLKNKKCIYSCIIAFSLTVTRDKKEFTFWFNNE
AYHSPPLSLSVLDNIIFMSLSGPDATITVSNKPQPRRVTENKYEKESTLALQIVFSLMFG
MSIFTSGFCLMTVTERVSKAKHIQFVSGVYTFNFWLSALLWDLIIHFVACVLLLLVFLIT
DVDILLEKYNFLDTMLILMLFGWSVIPFIYLLSFWYNSSTSAYIKIFVFNHCLGFMSLIV
DAVVNIIPDISTSTKNFILDSLLLLPIYNLGMGIYKYYNIQELKRLCTYPNMLCLSFFAV
KLGGKSYFGSERKNASSVKRQRGVKAGISNSSTWVTSLSANILVLVFSPSVDTPVYSMNQ
IAIGKNLIAMAATGVTYFFLIVLLELTSWNLKAFVYRYVFFGIYKIFSKARLSRELSTES
EDEDVQNEREAILQHPHKSLSSTVLIKELVKIYFKVPPILAVRNISVTIQKEECFGLLGL
NGAGKTTTFEILTGEEVATSGDVFIEGYSITENIRKVRSKIGYCPQFDALLEFMTPREIL
TMYARVWGLPENSISPYVDNLLEMLYLQPQAEKFIYTLSGGNKRRVSTAVAIMGKSSVVF
LDEPSTGMDPLARRMLWNTVIRTRESGKVIIITSHSMEECEALCTRLAIMVQGKFVCLGS
PQHLKNKFGNVYIMNAKFKTGTDDNVIKDFEGFIAQVFPGSQLKQENQGILNYYIPIKDN
TWGKVFGILEKAKEQYNLEDYSISQITLEQVFLTFAKLDNPESDYAKAKAVP
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atgggttcattgcgcatgaagcaattttcagccctcctgtggaaaaattcccttttgaag
aggcggaacgtggttggcttagtggtggaaatcaccttgatatttctgttgtttgtgtgg
actttgactatgcgcagaatttcaaagaagaaatttgttcaggctgtgacttttattcct
atccccctgaaattacccacgttccttaataaaaattttgaatatgaattggcttatgtg
ccttctgaaagtgatgcggcaagaaatattacagagatggtgaaaaaagatttaaatttc
aactttacagttcgaggcttttcttcagaaaaatcttttgagaaatacattaagtatgaa
aacacatctgcatatgtgctggctgccattgtgtttgatcacgtgttcaaaaccaatgat
gaacgattaccacttcaggtaaaatataatttgcgctttggtcgtctctataatccttat
aatcccttcagtccgtctaagaaaaagagagcaaagaactggaacacatcgactctcttc
ccacctgtgccctctctaggaccccggaacttacttcaacacgatgggggggaccctgga
tacatcagagaaggatttcttgttgtgcaacattctttagataaggccatcatggtgtat
catagtggcagagcggctgaagacatgtttgctaataccaccatttatgcaaacagattc
ccataccctgctttcaccgatgacaaattcttgtggtctttcatatccatgtttccgtgg
acaattttatttacatttactcaaatggcacttgtcattgttgggaccattatgatggaa
aaggaaaagcgattaaaggaataccagctcatggtgggactcagtaatgctatgctctgg
gtttcgtatttcgtcaccttcttattgatgtatttgattatcatctttttgctgtgtgga
attttatttctcaagattacacacgagagagtctttcaacacagcgacccactgttcatt
gccttctatttcctgtgttttgccatctcctcagtgttacttggcttcatgatcagcaca
ctctttaataaagcgtctctggcctcttccattgcgggtttcctccactttctcacgttc
ttgccttacttaatcatagttaagaagtatggtcagacaagcctcagcgggaagctggcg
ctcagcctcatcacaaacacagcactagctttcggggctgacttaatatgcaagatggaa
atgaaaggggatggcgctcagtggtacaacctcgctacaaaaataaatgccgatgatgac
ttaactttggctcatataataggaatgtttttatttagtgcttttctgtatggccttgtg
gcctggtacatagatgctgtctttccagggaactatggcgtacctaagccctggaacttt
ttcctgcagaaaacctactggtttggagaaccttccttaagcaaggaagagagccaagtc
actgatgtaccctcaaatgattttattgagcctgaacctgttggcttagaggctggcatc
cagattcaacatttgtacaagaaattcacattaaaaaataataccctgatggcagtaaaa
gacttgtctttgaacctgtacgaggggcagatcaccgttcttctgggacataacggggca
ggaaagaccactaccttatccatcctcacaggtttgtatcttcctaccagaggaaaggtc
tacattggtggatatgacatctcaactgacatggttcaagttaggaaaagcttgggcttg
tgtccccaggatgacctgttgttcccgatgatgactgtgtcagaacaccttgatttctac
tgtatgataaaaggaatgccttcaaataaaagatccagagaaattcgtaggatgctcact
gcttttgacctgctgcataaaagtgatacaatgaccaagaatttgagtggagggatgaag
cgcaaactctcaatcatcatagctcttataggggacaccaaggtggtgatacttgatgag
ccaacatctggcatggatccagtctcaaggagggccacctgggacttacttcagcaatat
aaagagaaccgtaccattttgctgaccacacaccacatggacgaagctgatgtgcttggt
gaccgcattgccatcctagtcatggggaccctgaagtgctgtggctcttcacttttcctg
aagaaattatatggtgtgggatatcacctagtcatggtgaagactcttgaatgtgatgtt
gaaaaaatctccgagttgattaagaattacataccaactgctgagatggagatgaacgtt
gcagctgaattgtcatttatcctgccaaaggagtacacacacaggttttcagaacttttc
gcagaaatagaaaaaagacaagaagagctcggtatcattggctttggtgtctccatgact
acaatggatgaggtttttttcaaggtcagtaatctggaagacttgaagctgaatactgag
tctacctatccgacttccacaaaggagcaaagcacaaataatgacaaccagaatatgaat
gtacccagaaattttgatagaaaaaattatccaagaagatcctatgattcttcattcaat
actgggtgggttctctacgcccagcagttccgagccatgctcatcaaaagggcagtgttc
tcttggcgcaactggaaactgctgcttttgcagttgctggcacttctgggtctcatgtat
cttctgatgagaggcataagcttctcaacgactcgagaacctgccagggtaatggatttg
gagcagtacatggagaccattgtacccttctcaatttcaggagatcctgatttgacccag
aatctcaccaaaaatcttgagatcatgttaaaggctaaaaaacaagaacttcatgaagta
caaggtgatgtccagagctacttgctgaaaaataaaaaatgcatttactcatgcatcatt
gcattctcccttaccgttaccagagacaaaaaggagtttaccttctggttcaacaacgag
gcgtaccattcaccgccactatccttgtcggtcttagacaatattatatttatgtctctc
tctggcccggatgccaccattactgtctccaacaagcctcagcctcgacgtgtcactgag
aacaaatatgaaaaggaatctactttggcacttcagatagtctttagcttgatgtttggg
atgagtattttcaccagtggcttttgccttatgacagtgactgagcgagttagtaaagca
aagcacatccagtttgtgagtggggtctacacctttaatttttggctctcagctctgcta
tgggatctcatcatccattttgttgcctgtgttctactgctgctggtgttcctaatcact
gatgtggacatactgttggagaagtacaatttcctggacacgatgctcatcctcatgctc
tttggatggtctgtcatccccttcatctacctgctgagtttctggtacaatagtagcacc
agcgcctatatcaagatcttcgtcttcaaccactgtttagggtttatgagtttaattgtg
gatgctgtggtaaacatcatcccagacatcagcaccagtactaagaacttcatacttgac
tcgctgctgttattacccatttataaccttgggatgggcatctacaaatactataacatc
caagagttgaagagactatgtacttatccgaatatgctatgcctttcattttttgccgtg
aaattgggtggaaagagttactttggtagtgagaggaagaacgcaagctcagtgaagagg
cagaggggagtgaaggcagggatctccaactcaagcacctgggtgacatctctttctgct
aacattcttgtgttggtcttctcgccatcagttgatactcctgtatacagtatgaaccaa
atcgcaattggaaaaaatttgattgccatggctgccacaggagtgacttacttcttcctc
attgtccttctggagcttacctcatggaatttaaaagcatttgtatatcgctatgttttc
tttggaatttataagatatttagtaaggctagactgtccagagagttatccacggaatct
gaagatgaagatgtgcaaaatgaaagggaagccatcctgcagcatcctcacaagtccctg
agttccactgtgctcattaaagagcttgtaaagatatattttaaagtgccacccattctg
gctgtgagaaatatctctgtcaccatccaaaaggaggagtgttttggattgcttggacta
aatggagctggaaaaactactacctttgaaattctgactggagaagaggttgctacgtct
ggggatgtgttcattgaaggctacagcatcaccgaaaatatccgaaaggtaaggtcaaaa
attggctattgtccacaatttgatgctttgctggagttcatgacccctcgggagatcttg
acaatgtatgccagggtgtgggggcttccagagaacagtattagtccctatgtggacaac
ttgttggaaatgctgtacctgcaaccacaagccgagaagtttatttacaccttgagtgga
ggaaacaaacgcagggtgagcaccgctgttgccataatggggaagtcgtccgtagtcttc
ctagatgaaccgtccactggcatggacccattagcccggcgcatgctctggaacacagtg
ataaggacacgagagagtggcaaggtcatcatcataacctctcacagtatggaggagtgt
gaagctctctgtaccaggctagccatcatggtgcagggaaagttcgtgtgcctggggagc
cctcagcatctcaagaacaaatttggcaatgtttacataatgaatgccaagttcaaaact
ggcactgatgacaatgtaataaaggattttgaaggatttattgcccaggttttcccaggt
agtcagctgaagcaagagaatcaagggatccttaattactacattcccatcaaggacaac
acctggggaaaggtgtttggcattctggagaaagcaaaagagcaatacaatttagaagac
tattccatcagtcagatcaccctggagcaagtcttcctgacctttgccaaactagataac
ccagaaagtgattatgcaaaagcaaaagcggtgccttga
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integrated database retrieval system
