KEGG   Arvicola amphibius (Eurasian water vole): 119825583
Entry
119825583         CDS       T08327                                 
Symbol
Polr2j
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
aamp  Arvicola amphibius (Eurasian water vole)
Pathway
aamp03020  RNA polymerase
aamp03420  Nucleotide excision repair
aamp05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:aamp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    119825583 (Polr2j)
  09124 Replication and repair
   03420 Nucleotide excision repair
    119825583 (Polr2j)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    119825583 (Polr2j)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aamp03021]
    119825583 (Polr2j)
   03400 DNA repair and recombination proteins [BR:aamp03400]
    119825583 (Polr2j)
Transcription machinery [BR:aamp03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     119825583 (Polr2j)
DNA repair and recombination proteins [BR:aamp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      119825583 (Polr2j)
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L SHNi-TPR
Other DBs
NCBI-GeneID: 119825583
NCBI-ProteinID: XP_038202478
LinkDB
Position
10:94289946..94296275
AA seq 117 aa
MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG
YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq 354 nt   +upstreamnt  +downstreamnt
atgaacgctcctccggccttcgagtcgttcttgctcttcgagggcgaaaagaaaatcacc
attaacaaggacactaaggtgcccaatgcttgcttgttcaccatcaacaaagaagaccac
actctggggaacatcatcaaatcacagctgctgaaggacccacaggtgctgtttgccggc
tacaaagtccctcaccccttggagcacaagatcatcattcgtgtgcagaccaccccagac
tacagtccccaggaggccttcaccaacgccatcacagacctcatcagcgagctctccctt
ctggaggagcgattccgggtggccatcaaggacaagcaagaaggaattgagtag

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